RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 RBM8AQ9Y5S9 174 aaKnown RBP23.39■■□□□ 1.33
LIME1-205ENST00000480139 C19orf81C9J6K1 198 aa23.38■■□□□ 1.33
LIME1-205ENST00000480139 USP17L10C9JJH3 530 aa23.38■■□□□ 1.33
LIME1-205ENST00000480139 ICA1Q05084 483 aa23.38■■□□□ 1.33
LIME1-205ENST00000480139 MOGSQ13724 837 aa23.38■■□□□ 1.33
LIME1-205ENST00000480139 FASTKD5Q7L8L6 764 aaKnown RBP23.38■■□□□ 1.33
LIME1-205ENST00000480139 IFNL1Q8IU54 200 aa23.38■■□□□ 1.33
LIME1-205ENST00000480139 PROCA1Q8NCQ7 364 aaPredicted RBP23.38■■□□□ 1.33
LIME1-205ENST00000480139 ZCCHC17Q9NP64 241 aaKnown RBP23.38■■□□□ 1.33
LIME1-205ENST00000480139 IGKV6D-41A0A0C4DH26 115 aa23.37■■□□□ 1.33
LIME1-205ENST00000480139 ALDH1A1P00352 501 aa23.37■■□□□ 1.33
LIME1-205ENST00000480139 CYP21A2P08686 494 aa23.37■■□□□ 1.33
LIME1-205ENST00000480139 TSPY3P0CV98 308 aa23.37■■□□□ 1.33
LIME1-205ENST00000480139 TSPY8P0CW00 308 aa23.37■■□□□ 1.33
LIME1-205ENST00000480139 OTUD7BQ6GQQ9 843 aa23.37■■□□□ 1.33
LIME1-205ENST00000480139 PTPN18Q99952 460 aa23.37■■□□□ 1.33
LIME1-205ENST00000480139 KIAA1683Q9H0B3 1180 aa23.37■■□□□ 1.33
LIME1-205ENST00000480139 INCENPQ9NQS7 918 aa23.37■■□□□ 1.33
LIME1-205ENST00000480139 SAGE1Q9NXZ1 904 aa23.37■■□□□ 1.33
LIME1-205ENST00000480139 IGF2BP3O00425 579 aaKnown RBP eCLIP23.36■■□□□ 1.33
LIME1-205ENST00000480139 EPB41L2O43491 1005 aaKnown RBP23.36■■□□□ 1.33
LIME1-205ENST00000480139 CA12O43570 354 aa23.36■■□□□ 1.33
LIME1-205ENST00000480139 REC8O95072 547 aa23.36■■□□□ 1.33
LIME1-205ENST00000480139 TFAP4Q01664 338 aa23.36■■□□□ 1.33
LIME1-205ENST00000480139 MTMR2Q13614 643 aa23.36■■□□□ 1.33
LIME1-205ENST00000480139 NECTIN1Q15223 517 aa23.36■■□□□ 1.33
LIME1-205ENST00000480139 ANKRD23Q86SG2 305 aa23.36■■□□□ 1.33
LIME1-205ENST00000480139 SH2D4AQ9H788 454 aa23.36■■□□□ 1.33
LIME1-205ENST00000480139 CNNM2Q9H8M5 875 aa23.36■■□□□ 1.33
LIME1-205ENST00000480139 ARHGEF10LQ9HCE6 1279 aa23.36■■□□□ 1.33
LIME1-205ENST00000480139 NEDD4P46934 1319 aa23.35■■□□□ 1.33
LIME1-205ENST00000480139 TSPY2A6NKD2 308 aa23.35■■□□□ 1.33
LIME1-205ENST00000480139 RANBP6O60518 1105 aaKnown RBP23.35■■□□□ 1.33
LIME1-205ENST00000480139 USP14P54578 494 aa23.35■■□□□ 1.33
LIME1-205ENST00000480139 FAM47AQ5JRC9 791 aa23.35■■□□□ 1.33
LIME1-205ENST00000480139 PPP4R3BQ5MIZ7 849 aa23.35■■□□□ 1.33
LIME1-205ENST00000480139 SIAH1Q8IUQ4 282 aa23.35■■□□□ 1.33
LIME1-205ENST00000480139 ESR2Q92731 530 aa23.35■■□□□ 1.33
LIME1-205ENST00000480139 C12orf42Q96LP6 360 aa23.35■■□□□ 1.33
LIME1-205ENST00000480139 BEGAINQ9BUH8 593 aa23.35■■□□□ 1.33
LIME1-205ENST00000480139 CFHR5Q9BXR6 569 aa23.35■■□□□ 1.33
LIME1-205ENST00000480139 TOMM22Q9NS69 142 aa23.35■■□□□ 1.33
LIME1-205ENST00000480139 NYAP2Q9P242 653 aa23.35■■□□□ 1.33
LIME1-205ENST00000480139 SLC45A1Q9Y2W3 748 aa23.35■■□□□ 1.33
LIME1-205ENST00000480139 MYH4Q9Y623 1939 aa23.35■■□□□ 1.33
LIME1-205ENST00000480139 PCNTO95613 3336 aa23.35■■□□□ 1.33
LIME1-205ENST00000480139 BTBD19C9JJ37 291 aa23.34■■□□□ 1.33
LIME1-205ENST00000480139 HMGCS2P54868 508 aa23.34■■□□□ 1.33
LIME1-205ENST00000480139 ACER1Q8TDN7 264 aa23.34■■□□□ 1.33
LIME1-205ENST00000480139 FEZ1Q99689 392 aa23.34■■□□□ 1.33
LIME1-205ENST00000480139 KRT23Q9C075 422 aa23.34■■□□□ 1.33
LIME1-205ENST00000480139 MTMR4Q9NYA4 1195 aa23.34■■□□□ 1.33
LIME1-205ENST00000480139 SYNPO2Q9UMS6 1093 aa23.34■■□□□ 1.33
LIME1-205ENST00000480139 TMX2Q9Y320 296 aa23.34■■□□□ 1.33
LIME1-205ENST00000480139 A0A1W2PRG0 241 aa23.33■■□□□ 1.33
LIME1-205ENST00000480139 EEF2P13639 858 aaKnown RBP23.33■■□□□ 1.33
LIME1-205ENST00000480139 RRP12Q5JTH9 1297 aaKnown RBP23.33■■□□□ 1.33
LIME1-205ENST00000480139 GPAT2Q6NUI2 795 aa23.33■■□□□ 1.33
LIME1-205ENST00000480139 USP17L2Q6R6M4 530 aa23.33■■□□□ 1.33
LIME1-205ENST00000480139 FAM43AQ8N2R8 423 aa23.33■■□□□ 1.33
LIME1-205ENST00000480139 CEP95Q96GE4 821 aa23.33■■□□□ 1.33
LIME1-205ENST00000480139 TCP11L1Q9NUJ3 509 aa23.33■■□□□ 1.33
LIME1-205ENST00000480139 RNF186Q9NXI6 227 aa23.33■■□□□ 1.33
LIME1-205ENST00000480139 TMOD4Q9NZQ9 345 aa23.33■■□□□ 1.33
LIME1-205ENST00000480139 AGTPBP1Q9UPW5 1226 aa23.33■■□□□ 1.33
LIME1-205ENST00000480139 EIF5BO60841 1220 aaKnown RBP23.32■■□□□ 1.32
LIME1-205ENST00000480139 NOVP48745 357 aa23.32■■□□□ 1.32
LIME1-205ENST00000480139 RNF20Q5VTR2 975 aa23.32■■□□□ 1.32
LIME1-205ENST00000480139 GADL1Q6ZQY3 521 aa23.32■■□□□ 1.32
LIME1-205ENST00000480139 CLEC10AQ8IUN9 316 aa23.32■■□□□ 1.32
LIME1-205ENST00000480139 MKL1Q969V6 931 aa23.32■■□□□ 1.32
LIME1-205ENST00000480139 SLC27A2O14975 620 aa23.31■■□□□ 1.32
LIME1-205ENST00000480139 TTLL1O95922 423 aa23.31■■□□□ 1.32
LIME1-205ENST00000480139 CREB3L3Q68CJ9 461 aa23.31■■□□□ 1.32
LIME1-205ENST00000480139 IL17RBQ9NRM6 502 aa23.31■■□□□ 1.32
LIME1-205ENST00000480139 EMILIN3Q9NT22 766 aa23.31■■□□□ 1.32
LIME1-205ENST00000480139 E7EWF7 191 aa23.3■■□□□ 1.32
LIME1-205ENST00000480139 TRDNQ13061 729 aa23.3■■□□□ 1.32
LIME1-205ENST00000480139 PABPC4Q13310 644 aaKnown RBP eCLIP23.3■■□□□ 1.32
LIME1-205ENST00000480139 LPAR1Q92633 364 aa23.3■■□□□ 1.32
LIME1-205ENST00000480139 B4E1Z4 1266 aa23.29■■□□□ 1.32
LIME1-205ENST00000480139 PDHXO00330 501 aa23.29■■□□□ 1.32
LIME1-205ENST00000480139 KDM4AO75164 1064 aa23.29■■□□□ 1.32
LIME1-205ENST00000480139 TRPA1O75762 1119 aa23.29■■□□□ 1.32
LIME1-205ENST00000480139 HSPA1AP0DMV8 641 aaKnown RBP23.29■■□□□ 1.32
LIME1-205ENST00000480139 HSPA1BP0DMV9 641 aaKnown RBP23.29■■□□□ 1.32
LIME1-205ENST00000480139 TREML2Q5T2D2 321 aa23.29■■□□□ 1.32
LIME1-205ENST00000480139 VCPKMTQ9H867 229 aa23.29■■□□□ 1.32
LIME1-205ENST00000480139 TAF6LQ9Y6J9 622 aa23.29■■□□□ 1.32
LIME1-205ENST00000480139 HOXA7P31268 230 aaPredicted RBP23.28■■□□□ 1.32
LIME1-205ENST00000480139 DGKZQ13574 1117 aa23.28■■□□□ 1.32
LIME1-205ENST00000480139 TSGA10IPQ3SY00 556 aa23.28■■□□□ 1.32
LIME1-205ENST00000480139 CCDC178Q5BJE1 867 aa23.28■■□□□ 1.32
LIME1-205ENST00000480139 STOX1Q6ZVD7 989 aa23.28■■□□□ 1.32
LIME1-205ENST00000480139 IQCA1Q86XH1 822 aa23.28■■□□□ 1.32
LIME1-205ENST00000480139 NCOA7Q8NI08 942 aa23.28■■□□□ 1.32
LIME1-205ENST00000480139 NKX2-3Q8TAU0 364 aa23.28■■□□□ 1.32
LIME1-205ENST00000480139 KCNB2Q92953 911 aa23.28■■□□□ 1.32
LIME1-205ENST00000480139 GOPCQ9HD26 462 aa23.28■■□□□ 1.32
LIME1-205ENST00000480139 CLIP2Q9UDT6 1046 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms