RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 CYB5R4Q7L1T6 521 aa18.8■□□□□ 0.6
COPS3-207ENST00000477299 ZNF280CQ8ND82 737 aa18.8■□□□□ 0.6
COPS3-207ENST00000477299 BRI3BPQ8WY22 251 aa18.8■□□□□ 0.6
COPS3-207ENST00000477299 KCNH4Q9UQ05 1017 aa18.8■□□□□ 0.6
COPS3-207ENST00000477299 THSD7BQ9C0I4 1608 aa18.8■□□□□ 0.6
COPS3-207ENST00000477299 REC8O95072 547 aa18.79■□□□□ 0.6
COPS3-207ENST00000477299 TSPY3P0CV98 308 aa18.79■□□□□ 0.6
COPS3-207ENST00000477299 TSPY8P0CW00 308 aa18.79■□□□□ 0.6
COPS3-207ENST00000477299 EEF2P13639 858 aaKnown RBP18.79■□□□□ 0.6
COPS3-207ENST00000477299 ATP2B2Q01814 1243 aa18.79■□□□□ 0.6
COPS3-207ENST00000477299 ADCK5Q3MIX3 580 aa18.79■□□□□ 0.6
COPS3-207ENST00000477299 CHST3Q7LGC8 479 aa18.79■□□□□ 0.6
COPS3-207ENST00000477299 CEP95Q96GE4 821 aa18.79■□□□□ 0.6
COPS3-207ENST00000477299 WDR18Q9BV38 432 aa18.79■□□□□ 0.6
COPS3-207ENST00000477299 ZSWIM5Q9P217 1185 aa18.79■□□□□ 0.6
COPS3-207ENST00000477299 TAOK2Q9UL54 1235 aa18.79■□□□□ 0.6
COPS3-207ENST00000477299 CCL15-CCL14A0A0B4J2E2 113 aa18.78■□□□□ 0.6
COPS3-207ENST00000477299 TSPY2A6NKD2 308 aa18.78■□□□□ 0.6
COPS3-207ENST00000477299 HSPA4P34932 840 aa18.78■□□□□ 0.6
COPS3-207ENST00000477299 HMGCS2P54868 508 aa18.78■□□□□ 0.6
COPS3-207ENST00000477299 NOGQ13253 232 aa18.78■□□□□ 0.6
COPS3-207ENST00000477299 MTMR2Q13614 643 aa18.78■□□□□ 0.6
COPS3-207ENST00000477299 CCL15Q16663 113 aa18.78■□□□□ 0.6
COPS3-207ENST00000477299 CHMP4CQ96CF2 233 aa18.78■□□□□ 0.6
COPS3-207ENST00000477299 ZNF287Q9HBT7 754 aa18.78■□□□□ 0.6
COPS3-207ENST00000477299 EMILIN3Q9NT22 766 aa18.78■□□□□ 0.6
COPS3-207ENST00000477299 GINM1Q9NU53 330 aa18.78■□□□□ 0.6
COPS3-207ENST00000477299 LOC285556D6RIA3 1793 aa18.78■□□□□ 0.6
COPS3-207ENST00000477299 A0A0G2JLL6 359 aaPredicted RBP18.77■□□□□ 0.6
COPS3-207ENST00000477299 IGF2BP3O00425 579 aaKnown RBP eCLIP18.77■□□□□ 0.6
COPS3-207ENST00000477299 ANTXR2P58335 489 aa18.77■□□□□ 0.6
COPS3-207ENST00000477299 ICA1Q05084 483 aa18.77■□□□□ 0.6
COPS3-207ENST00000477299 PRRT2Q7Z6L0 340 aaPredicted RBP18.77■□□□□ 0.6
COPS3-207ENST00000477299 KCNB2Q92953 911 aa18.77■□□□□ 0.6
COPS3-207ENST00000477299 RNF41Q9H4P4 317 aaPredicted RBP18.77■□□□□ 0.6
COPS3-207ENST00000477299 MTMR4Q9NYA4 1195 aa18.77■□□□□ 0.6
COPS3-207ENST00000477299 CLIP2Q9UDT6 1046 aa18.77■□□□□ 0.6
COPS3-207ENST00000477299 SNX14Q9Y5W7 946 aa18.77■□□□□ 0.6
COPS3-207ENST00000477299 USP17L10C9JJH3 530 aa18.76■□□□□ 0.59
COPS3-207ENST00000477299 CXCL11O14625 94 aa18.76■□□□□ 0.59
COPS3-207ENST00000477299 CPA1P15085 419 aa18.76■□□□□ 0.59
COPS3-207ENST00000477299 BACE1P56817 501 aa18.76■□□□□ 0.59
COPS3-207ENST00000477299 SNAPC2Q13487 334 aa18.76■□□□□ 0.59
COPS3-207ENST00000477299 TREML2Q5T2D2 321 aa18.76■□□□□ 0.59
COPS3-207ENST00000477299 RCSD1Q6JBY9 416 aa18.76■□□□□ 0.59
COPS3-207ENST00000477299 GPAT2Q6NUI2 795 aa18.76■□□□□ 0.59
COPS3-207ENST00000477299 GADL1Q6ZQY3 521 aa18.76■□□□□ 0.59
COPS3-207ENST00000477299 FAM43AQ8N2R8 423 aa18.76■□□□□ 0.59
COPS3-207ENST00000477299 KANSL2Q9H9L4 492 aa18.76■□□□□ 0.59
COPS3-207ENST00000477299 AS3MTQ9HBK9 375 aa18.76■□□□□ 0.59
COPS3-207ENST00000477299 GPHNQ9NQX3 736 aaPredicted RBP18.76■□□□□ 0.59
COPS3-207ENST00000477299 PLIN4Q96Q06 1357 aa18.76■□□□□ 0.59
COPS3-207ENST00000477299 TESPA1A2RU30 521 aaPredicted RBP18.75■□□□□ 0.59
COPS3-207ENST00000477299 MANSC4A6NHS7 340 aaPredicted RBP18.75■□□□□ 0.59
COPS3-207ENST00000477299 BTBD19C9JJ37 291 aa18.75■□□□□ 0.59
COPS3-207ENST00000477299 MAP2K2P36507 400 aa18.75■□□□□ 0.59
COPS3-207ENST00000477299 TM4SF4P48230 202 aa18.75■□□□□ 0.59
COPS3-207ENST00000477299 GTF2A2P52657 109 aa18.75■□□□□ 0.59
COPS3-207ENST00000477299 RASGRP2Q7LDG7 609 aa18.75■□□□□ 0.59
COPS3-207ENST00000477299 MB21D2Q8IYB1 491 aaPredicted RBP18.75■□□□□ 0.59
COPS3-207ENST00000477299 ESR2Q92731 530 aa18.75■□□□□ 0.59
COPS3-207ENST00000477299 KRT23Q9C075 422 aa18.75■□□□□ 0.59
COPS3-207ENST00000477299 SENP2Q9HC62 589 aa18.75■□□□□ 0.59
COPS3-207ENST00000477299 PCP11498 1178 aaKnown RBP18.74■□□□□ 0.59
COPS3-207ENST00000477299 SH3D19Q5HYK7 790 aa18.74■□□□□ 0.59
COPS3-207ENST00000477299 LRRC47Q8N1G4 583 aaKnown RBP18.74■□□□□ 0.59
COPS3-207ENST00000477299 NCOA7Q8NI08 942 aa18.74■□□□□ 0.59
COPS3-207ENST00000477299 TCEANC2Q96MN5 208 aa18.74■□□□□ 0.59
COPS3-207ENST00000477299 R3HDMLQ9H3Y0 253 aa18.74■□□□□ 0.59
COPS3-207ENST00000477299 NYAP2Q9P242 653 aa18.74■□□□□ 0.59
COPS3-207ENST00000477299 PCNTO95613 3336 aa18.73■□□□□ 0.59
COPS3-207ENST00000477299 RLFQ13129 1914 aa18.73■□□□□ 0.59
COPS3-207ENST00000477299 PARP14Q460N5 1801 aa18.73■□□□□ 0.59
COPS3-207ENST00000477299 CETPP11597 493 aa18.73■□□□□ 0.59
COPS3-207ENST00000477299 TSGA10IPQ3SY00 556 aa18.73■□□□□ 0.59
COPS3-207ENST00000477299 IFNL1Q8IU54 200 aa18.73■□□□□ 0.59
COPS3-207ENST00000477299 SPICE1Q8N0Z3 855 aa18.73■□□□□ 0.59
COPS3-207ENST00000477299 FEZ1Q99689 392 aa18.73■□□□□ 0.59
COPS3-207ENST00000477299 LRRC2Q9BYS8 371 aa18.73■□□□□ 0.59
COPS3-207ENST00000477299 TCP11L1Q9NUJ3 509 aa18.73■□□□□ 0.59
COPS3-207ENST00000477299 STX8Q9UNK0 236 aa18.73■□□□□ 0.59
COPS3-207ENST00000477299 TMX2Q9Y320 296 aa18.73■□□□□ 0.59
COPS3-207ENST00000477299 TTLL1O95922 423 aa18.72■□□□□ 0.59
COPS3-207ENST00000477299 NOVP48745 357 aa18.72■□□□□ 0.59
COPS3-207ENST00000477299 RNF20Q5VTR2 975 aa18.72■□□□□ 0.59
COPS3-207ENST00000477299 MKL1Q969V6 931 aa18.72■□□□□ 0.59
COPS3-207ENST00000477299 ZSCAN10Q96SZ4 725 aaPredicted RBP18.72■□□□□ 0.59
COPS3-207ENST00000477299 TMEM47Q9BQJ4 181 aa18.72■□□□□ 0.59
COPS3-207ENST00000477299 KIAA1683Q9H0B3 1180 aa18.72■□□□□ 0.59
COPS3-207ENST00000477299 CNNM2Q9H8M5 875 aa18.72■□□□□ 0.59
COPS3-207ENST00000477299 ARHGEF10LQ9HCE6 1279 aa18.72■□□□□ 0.59
COPS3-207ENST00000477299 C19orf81C9J6K1 198 aa18.71■□□□□ 0.59
COPS3-207ENST00000477299 RAD21O60216 631 aa18.71■□□□□ 0.59
COPS3-207ENST00000477299 TRDNQ13061 729 aa18.71■□□□□ 0.59
COPS3-207ENST00000477299 SEC23AQ15436 765 aa18.71■□□□□ 0.59
COPS3-207ENST00000477299 USP17L2Q6R6M4 530 aa18.71■□□□□ 0.59
COPS3-207ENST00000477299 RALYLQ86SE5 291 aaKnown RBP18.71■□□□□ 0.59
COPS3-207ENST00000477299 ENAHQ8N8S7 591 aaPredicted RBP18.71■□□□□ 0.59
COPS3-207ENST00000477299 NEK1Q96PY6 1258 aa18.71■□□□□ 0.59
COPS3-207ENST00000477299 NUP88Q99567 741 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms