RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 CNNM2Q9H8M5 875 aa8.92□□□□□ -0.98
TM9SF3-204ENST00000475401 CEP131Q9UPN4 1083 aa8.92□□□□□ -0.98
TM9SF3-204ENST00000475401 MAPK8IP1Q9UQF2 711 aa8.92□□□□□ -0.98
TM9SF3-204ENST00000475401 IGF2BP3O00425 579 aaKnown RBP eCLIP8.91□□□□□ -0.98
TM9SF3-204ENST00000475401 COBLO75128 1261 aa8.91□□□□□ -0.98
TM9SF3-204ENST00000475401 FOSL1P15407 271 aa8.91□□□□□ -0.98
TM9SF3-204ENST00000475401 RANGAP1P46060 587 aaPredicted RBP8.91□□□□□ -0.98
TM9SF3-204ENST00000475401 SFRP5Q5T4F7 317 aa8.91□□□□□ -0.98
TM9SF3-204ENST00000475401 KIF2CQ99661 725 aa8.91□□□□□ -0.98
TM9SF3-204ENST00000475401 TM9SF2Q99805 663 aa8.91□□□□□ -0.98
TM9SF3-204ENST00000475401 PRR19A6NJB7 356 aa8.9□□□□□ -0.98
TM9SF3-204ENST00000475401 RGS13O14921 159 aa8.9□□□□□ -0.98
TM9SF3-204ENST00000475401 DNAJA2O60884 412 aa8.9□□□□□ -0.98
TM9SF3-204ENST00000475401 EOMESO95936 686 aa8.9□□□□□ -0.98
TM9SF3-204ENST00000475401 NME1P15531 152 aaKnown RBP8.9□□□□□ -0.98
TM9SF3-204ENST00000475401 CCNFP41002 786 aa8.9□□□□□ -0.98
TM9SF3-204ENST00000475401 RBBP8NLQ8NC74 664 aaPredicted RBP8.9□□□□□ -0.98
TM9SF3-204ENST00000475401 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.9□□□□□ -0.98
TM9SF3-204ENST00000475401 ANTXR1Q9H6X2 564 aa8.9□□□□□ -0.98
TM9SF3-204ENST00000475401 MKNK2Q9HBH9 465 aa8.9□□□□□ -0.98
TM9SF3-204ENST00000475401 RIN3Q8TB24 985 aa8.89□□□□□ -0.99
TM9SF3-204ENST00000475401 BAHD1Q8TBE0 780 aaPredicted RBP8.89□□□□□ -0.99
TM9SF3-204ENST00000475401 ANAPC16Q96DE5 110 aa8.89□□□□□ -0.99
TM9SF3-204ENST00000475401 FAM155AB1AL88 458 aaPredicted RBP8.88□□□□□ -0.99
TM9SF3-204ENST00000475401 KIR3DL1P43629 444 aa8.88□□□□□ -0.99
TM9SF3-204ENST00000475401 ZMYM1Q5SVZ6 1142 aa8.88□□□□□ -0.99
TM9SF3-204ENST00000475401 INTS3Q68E01 1043 aaKnown RBP8.88□□□□□ -0.99
TM9SF3-204ENST00000475401 DHRS1Q96LJ7 313 aa8.88□□□□□ -0.99
TM9SF3-204ENST00000475401 SLC12A7Q9Y666 1083 aa8.88□□□□□ -0.99
TM9SF3-204ENST00000475401 CBX7O95931 251 aa8.87□□□□□ -0.99
TM9SF3-204ENST00000475401 ITIH2P19823 946 aa8.87□□□□□ -0.99
TM9SF3-204ENST00000475401 GUCY2CP25092 1073 aa8.87□□□□□ -0.99
TM9SF3-204ENST00000475401 GIPRP48546 466 aa8.87□□□□□ -0.99
TM9SF3-204ENST00000475401 RNF4P78317 190 aa8.87□□□□□ -0.99
TM9SF3-204ENST00000475401 LSRQ86X29 649 aaPredicted RBP8.87□□□□□ -0.99
TM9SF3-204ENST00000475401 TAB3Q8N5C8 712 aaPredicted RBP8.87□□□□□ -0.99
TM9SF3-204ENST00000475401 FAM181AQ8N9Y4 354 aa8.87□□□□□ -0.99
TM9SF3-204ENST00000475401 DNAJB8Q8NHS0 232 aa8.87□□□□□ -0.99
TM9SF3-204ENST00000475401 HEXIM2Q96MH2 286 aaKnown RBP8.87□□□□□ -0.99
TM9SF3-204ENST00000475401 KCNH3Q9ULD8 1083 aa8.87□□□□□ -0.99
TM9SF3-204ENST00000475401 TNFRSF10CO14798 259 aa8.86□□□□□ -0.99
TM9SF3-204ENST00000475401 CLEC3AO75596 197 aa8.86□□□□□ -0.99
TM9SF3-204ENST00000475401 ITGB7P26010 798 aa8.86□□□□□ -0.99
TM9SF3-204ENST00000475401 MFSD4AQ8N468 514 aa8.86□□□□□ -0.99
TM9SF3-204ENST00000475401 NETO1Q8TDF5 533 aa8.86□□□□□ -0.99
TM9SF3-204ENST00000475401 RNF141Q8WVD5 230 aa8.86□□□□□ -0.99
TM9SF3-204ENST00000475401 GMLQ99445 158 aa8.86□□□□□ -0.99
TM9SF3-204ENST00000475401 TANGO6Q9C0B7 1094 aa8.86□□□□□ -0.99
TM9SF3-204ENST00000475401 SCO2A0A1W2PP80 73 aa8.85□□□□□ -0.99
TM9SF3-204ENST00000475401 CEACAM5P06731 702 aa8.85□□□□□ -0.99
TM9SF3-204ENST00000475401 SSTR4P31391 388 aa8.85□□□□□ -0.99
TM9SF3-204ENST00000475401 SF3A1Q15459 793 aaKnown RBP8.85□□□□□ -0.99
TM9SF3-204ENST00000475401 PPP2R5EQ16537 467 aa8.85□□□□□ -0.99
TM9SF3-204ENST00000475401 IFI16Q16666 785 aaKnown RBP8.85□□□□□ -0.99
TM9SF3-204ENST00000475401 C22orf34Q6ZV56 151 aa8.85□□□□□ -0.99
TM9SF3-204ENST00000475401 PPP1R13LQ8WUF5 828 aa8.85□□□□□ -0.99
TM9SF3-204ENST00000475401 SHDQ96IW2 340 aa8.85□□□□□ -0.99
TM9SF3-204ENST00000475401 KREMEN1Q96MU8 473 aa8.85□□□□□ -0.99
TM9SF3-204ENST00000475401 ASPNQ9BXN1 380 aa8.85□□□□□ -0.99
TM9SF3-204ENST00000475401 ZC3H7BQ9UGR2 993 aaKnown RBP8.85□□□□□ -0.99
TM9SF3-204ENST00000475401 R3HCC1Q9Y3T6 440 aaKnown RBP8.85□□□□□ -0.99
TM9SF3-204ENST00000475401 TMEM265A0A087WTH1 108 aa8.84□□□□□ -0.99
TM9SF3-204ENST00000475401 POLR2BP30876 1174 aaKnown RBP8.84□□□□□ -0.99
TM9SF3-204ENST00000475401 OXCT1P55809 520 aa8.84□□□□□ -0.99
TM9SF3-204ENST00000475401 TNNI3KQ59H18 835 aa8.84□□□□□ -0.99
TM9SF3-204ENST00000475401 FAM214BQ7L5A3 538 aa8.84□□□□□ -0.99
TM9SF3-204ENST00000475401 C19orf47Q8N9M1 422 aaKnown RBP8.84□□□□□ -0.99
TM9SF3-204ENST00000475401 SLC9A7Q96T83 725 aa8.84□□□□□ -0.99
TM9SF3-204ENST00000475401 PCMTD2Q9NV79 361 aa8.84□□□□□ -0.99
TM9SF3-204ENST00000475401 BSDC1Q9NW68 430 aaPredicted RBP8.84□□□□□ -0.99
TM9SF3-204ENST00000475401 PPP1R1BQ9UD71 204 aaPredicted RBP8.84□□□□□ -0.99
TM9SF3-204ENST00000475401 FAM86C2PA6NEL3 165 aa8.83□□□□□ -1
TM9SF3-204ENST00000475401 UBOX5O94941 541 aa8.83□□□□□ -1
TM9SF3-204ENST00000475401 FGRP09769 529 aa8.83□□□□□ -1
TM9SF3-204ENST00000475401 ZNF865P0CJ78 1059 aaPredicted RBP8.83□□□□□ -1
TM9SF3-204ENST00000475401 ATP2B1P20020 1258 aa8.83□□□□□ -1
TM9SF3-204ENST00000475401 HOXA10P31260 410 aaPredicted RBP8.83□□□□□ -1
TM9SF3-204ENST00000475401 BBS9Q3SYG4 887 aa8.83□□□□□ -1
TM9SF3-204ENST00000475401 RUFY4Q6ZNE9 571 aa8.83□□□□□ -1
TM9SF3-204ENST00000475401 MCF2L2Q86YR7 1114 aa8.83□□□□□ -1
TM9SF3-204ENST00000475401 PIWIL2Q8TC59 973 aaKnown RBP8.83□□□□□ -1
TM9SF3-204ENST00000475401 SLC6A18Q96N87 628 aa8.83□□□□□ -1
TM9SF3-204ENST00000475401 ASCC2Q9H1I8 757 aaPredicted RBP8.83□□□□□ -1
TM9SF3-204ENST00000475401 MRVI1Q9Y6F6 885 aa8.83□□□□□ -1
TM9SF3-204ENST00000475401 CLCN7P51798 805 aa8.82□□□□□ -1
TM9SF3-204ENST00000475401 STK11IPQ8N1F8 1099 aa8.82□□□□□ -1
TM9SF3-204ENST00000475401 PLD6Q8N2A8 252 aaKnown RBP8.82□□□□□ -1
TM9SF3-204ENST00000475401 MISP3Q96FF7 219 aa8.82□□□□□ -1
TM9SF3-204ENST00000475401 MKRN2Q9H000 416 aaKnown RBP8.82□□□□□ -1
TM9SF3-204ENST00000475401 ANGEL1Q9UNK9 670 aaKnown RBP8.82□□□□□ -1
TM9SF3-204ENST00000475401 SNX11Q9Y5W9 270 aa8.82□□□□□ -1
TM9SF3-204ENST00000475401 CD97P48960 835 aa8.81□□□□□ -1
TM9SF3-204ENST00000475401 UNC5AQ6ZN44 842 aa8.81□□□□□ -1
TM9SF3-204ENST00000475401 TTC6Q86TZ1 520 aa8.81□□□□□ -1
TM9SF3-204ENST00000475401 FBXL18Q96ME1 805 aa8.81□□□□□ -1
TM9SF3-204ENST00000475401 STK10O94804 968 aaKnown RBP8.8□□□□□ -1
TM9SF3-204ENST00000475401 ACRP10323 421 aa8.8□□□□□ -1
TM9SF3-204ENST00000475401 LRP8Q14114 963 aa8.8□□□□□ -1
TM9SF3-204ENST00000475401 MSMPQ1L6U9 139 aa8.8□□□□□ -1
TM9SF3-204ENST00000475401 CDKAL1Q5VV42 579 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms