RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 TMEM74Q96NL1 305 aa8.54□□□□□ -1.04
CD46-213ENST00000471987 RSRP1Q9BUV0 290 aa8.54□□□□□ -1.04
CD46-213ENST00000471987 CORINQ9Y5Q5 1042 aa8.54□□□□□ -1.04
CD46-213ENST00000471987 F6X3S4 739 aa8.53□□□□□ -1.04
CD46-213ENST00000471987 F13A1P00488 732 aa8.53□□□□□ -1.04
CD46-213ENST00000471987 GBP2P32456 591 aaPredicted RBP8.53□□□□□ -1.04
CD46-213ENST00000471987 TAGLNQ01995 201 aaKnown RBP8.53□□□□□ -1.04
CD46-213ENST00000471987 TMEM201Q5SNT2 666 aa8.53□□□□□ -1.04
CD46-213ENST00000471987 TMPRSS7Q7RTY8 843 aa8.53□□□□□ -1.04
CD46-213ENST00000471987 FAM13CQ8NE31 585 aa8.53□□□□□ -1.04
CD46-213ENST00000471987 RHOVQ96L33 236 aa8.53□□□□□ -1.04
CD46-213ENST00000471987 GZF1Q9H116 711 aaPredicted RBP8.53□□□□□ -1.04
CD46-213ENST00000471987 LRRC10BA6NIK2 292 aa8.52□□□□□ -1.05
CD46-213ENST00000471987 GDNFP39905 211 aa8.52□□□□□ -1.05
CD46-213ENST00000471987 ALPK1Q96QP1 1244 aa8.52□□□□□ -1.05
CD46-213ENST00000471987 PKN1Q16512 942 aa8.51□□□□□ -1.05
CD46-213ENST00000471987 FYB2Q5VWT5 728 aa8.51□□□□□ -1.05
CD46-213ENST00000471987 KSR1Q8IVT5 923 aa8.51□□□□□ -1.05
CD46-213ENST00000471987 SLFN12Q8IYM2 578 aa8.51□□□□□ -1.05
CD46-213ENST00000471987 KIRREL1Q96J84 757 aa8.51□□□□□ -1.05
CD46-213ENST00000471987 Q96M66 194 aa8.51□□□□□ -1.05
CD46-213ENST00000471987 PRR36Q9H6K5 1346 aa8.51□□□□□ -1.05
CD46-213ENST00000471987 ZNF503-AS2A6NEH8 195 aa8.5□□□□□ -1.05
CD46-213ENST00000471987 UPK3BL1B0FP48 263 aa8.5□□□□□ -1.05
CD46-213ENST00000471987 UPK3BL2E5RIL1 263 aa8.5□□□□□ -1.05
CD46-213ENST00000471987 GLI1P08151 1106 aa8.5□□□□□ -1.05
CD46-213ENST00000471987 JAG1P78504 1218 aa8.5□□□□□ -1.05
CD46-213ENST00000471987 SNAP47Q5SQN1 464 aa8.5□□□□□ -1.05
CD46-213ENST00000471987 PPP1R13LQ8WUF5 828 aa8.5□□□□□ -1.05
CD46-213ENST00000471987 SLC38A3Q99624 504 aa8.5□□□□□ -1.05
CD46-213ENST00000471987 TRIT1Q9H3H1 467 aaKnown RBP8.5□□□□□ -1.05
CD46-213ENST00000471987 C19orf73Q9NVV2 129 aa8.5□□□□□ -1.05
CD46-213ENST00000471987 KCNH3Q9ULD8 1083 aa8.5□□□□□ -1.05
CD46-213ENST00000471987 TMEM67Q5HYA8 995 aa8.49□□□□□ -1.05
CD46-213ENST00000471987 GOLM1Q8NBJ4 401 aa8.49□□□□□ -1.05
CD46-213ENST00000471987 FAM84AQ96KN4 292 aa8.49□□□□□ -1.05
CD46-213ENST00000471987 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.49□□□□□ -1.05
CD46-213ENST00000471987 SLAMF8Q9P0V8 285 aa8.49□□□□□ -1.05
CD46-213ENST00000471987 MINDY4BA8MYZ0 360 aa8.48□□□□□ -1.05
CD46-213ENST00000471987 ESR1P03372 595 aa8.48□□□□□ -1.05
CD46-213ENST00000471987 FAM160A1Q05DH4 1040 aa8.48□□□□□ -1.05
CD46-213ENST00000471987 MPP2Q14168 576 aa8.48□□□□□ -1.05
CD46-213ENST00000471987 MLANAQ16655 118 aa8.48□□□□□ -1.05
CD46-213ENST00000471987 LIN37Q96GY3 246 aaPredicted RBP8.48□□□□□ -1.05
CD46-213ENST00000471987 DUSP15Q9H1R2 295 aaPredicted RBP8.48□□□□□ -1.05
CD46-213ENST00000471987 GPATCH2Q9NW75 528 aa8.48□□□□□ -1.05
CD46-213ENST00000471987 REV1Q9UBZ9 1251 aa8.48□□□□□ -1.05
CD46-213ENST00000471987 ARID1BQ8NFD5 2236 aaPredicted RBP8.48□□□□□ -1.05
CD46-213ENST00000471987 RBAK-RBAKDNI3L0D1 243 aa8.47□□□□□ -1.05
CD46-213ENST00000471987 HTR3BO95264 441 aa8.47□□□□□ -1.05
CD46-213ENST00000471987 RAC2P15153 192 aa8.47□□□□□ -1.05
CD46-213ENST00000471987 TPP2P29144 1249 aaPredicted RBP8.47□□□□□ -1.05
CD46-213ENST00000471987 TNNI2P48788 182 aa8.47□□□□□ -1.05
CD46-213ENST00000471987 ZNF124Q15973 351 aa8.47□□□□□ -1.05
CD46-213ENST00000471987 MPZL3Q6UWV2 235 aa8.47□□□□□ -1.05
CD46-213ENST00000471987 TTC6Q86TZ1 520 aa8.47□□□□□ -1.05
CD46-213ENST00000471987 CREG2Q8IUH2 290 aa8.47□□□□□ -1.05
CD46-213ENST00000471987 DTWD2Q8NBA8 298 aa8.47□□□□□ -1.05
CD46-213ENST00000471987 RNF141Q8WVD5 230 aa8.47□□□□□ -1.05
CD46-213ENST00000471987 GPR62Q9BZJ7 368 aa8.47□□□□□ -1.05
CD46-213ENST00000471987 POLR3KQ9Y2Y1 108 aaPredicted RBP8.47□□□□□ -1.05
CD46-213ENST00000471987 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.46□□□□□ -1.06
CD46-213ENST00000471987 GRIN3BO60391 1043 aa8.46□□□□□ -1.06
CD46-213ENST00000471987 SRFP11831 508 aa8.46□□□□□ -1.06
CD46-213ENST00000471987 MESP2Q0VG99 397 aa8.46□□□□□ -1.06
CD46-213ENST00000471987 GAB4Q2WGN9 574 aa8.46□□□□□ -1.06
CD46-213ENST00000471987 REC114Q7Z4M0 266 aa8.46□□□□□ -1.06
CD46-213ENST00000471987 BHLHE22Q8NFJ8 381 aaPredicted RBP8.46□□□□□ -1.06
CD46-213ENST00000471987 CCDC74BQ96LY2 380 aa8.46□□□□□ -1.06
CD46-213ENST00000471987 KBTBD4Q9NVX7 518 aa8.46□□□□□ -1.06
CD46-213ENST00000471987 KLHL3Q9UH77 587 aa8.46□□□□□ -1.06
CD46-213ENST00000471987 TMEM59LQ9UK28 342 aa8.46□□□□□ -1.06
CD46-213ENST00000471987 DBX1A6NMT0 343 aa8.45□□□□□ -1.06
CD46-213ENST00000471987 MLECQ14165 292 aa8.45□□□□□ -1.06
CD46-213ENST00000471987 FAM196AQ6ZSG2 479 aa8.45□□□□□ -1.06
CD46-213ENST00000471987 ERMP1Q7Z2K6 904 aa8.45□□□□□ -1.06
CD46-213ENST00000471987 BCL11AQ9H165 835 aa8.45□□□□□ -1.06
CD46-213ENST00000471987 DUSP13Q9UII6 198 aa8.45□□□□□ -1.06
CD46-213ENST00000471987 DNAJC25-GNG10A0A024R161 153 aa8.44□□□□□ -1.06
CD46-213ENST00000471987 WASH4PA8MWX3 477 aa8.44□□□□□ -1.06
CD46-213ENST00000471987 CHURC1-FNTBB4DL54 471 aa8.44□□□□□ -1.06
CD46-213ENST00000471987 GARTP22102 1010 aa8.44□□□□□ -1.06
CD46-213ENST00000471987 ZNF326Q5BKZ1 582 aaKnown RBP8.44□□□□□ -1.06
CD46-213ENST00000471987 RALGPS1Q5JS13 557 aa8.44□□□□□ -1.06
CD46-213ENST00000471987 TSPYL5Q86VY4 417 aaPredicted RBP8.44□□□□□ -1.06
CD46-213ENST00000471987 BCL2L13Q9BXK5 485 aa8.44□□□□□ -1.06
CD46-213ENST00000471987 ROBO2Q9HCK4 1378 aa8.44□□□□□ -1.06
CD46-213ENST00000471987 CWF19L2Q2TBE0 894 aaKnown RBP8.43□□□□□ -1.06
CD46-213ENST00000471987 PHACTR4Q8IZ21 702 aa8.43□□□□□ -1.06
CD46-213ENST00000471987 FBXO27Q8NI29 283 aa8.43□□□□□ -1.06
CD46-213ENST00000471987 ABHD4Q8TB40 342 aa8.43□□□□□ -1.06
CD46-213ENST00000471987 BAHD1Q8TBE0 780 aaPredicted RBP8.43□□□□□ -1.06
CD46-213ENST00000471987 KREMEN1Q96MU8 473 aa8.43□□□□□ -1.06
CD46-213ENST00000471987 ASPNQ9BXN1 380 aa8.43□□□□□ -1.06
CD46-213ENST00000471987 HK2P52789 917 aa8.42□□□□□ -1.06
CD46-213ENST00000471987 CHMP4BP1P59074 171 aa8.42□□□□□ -1.06
CD46-213ENST00000471987 EGR3Q06889 387 aa8.42□□□□□ -1.06
CD46-213ENST00000471987 FBXL19Q6PCT2 694 aa8.42□□□□□ -1.06
CD46-213ENST00000471987 PRR23BQ6ZRT6 265 aa8.42□□□□□ -1.06
CD46-213ENST00000471987 GIPC2Q8TF65 315 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms