RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 DCP1AQ9NPI6 582 aaPredicted RBP7.05□□□□□ -1.28
SCFD1-205ENST00000469043 LDHBP07195 334 aaKnown RBP7.04□□□□□ -1.28
SCFD1-205ENST00000469043 ETV3P41162 512 aa7.04□□□□□ -1.28
SCFD1-205ENST00000469043 CDK8P49336 464 aa7.04□□□□□ -1.28
SCFD1-205ENST00000469043 CCDC85BQ15834 202 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-205ENST00000469043 EPB41L4BQ9H329 900 aa7.04□□□□□ -1.28
SCFD1-205ENST00000469043 GFRA2O00451 464 aa7.03□□□□□ -1.28
SCFD1-205ENST00000469043 PDE4BQ07343 736 aa7.03□□□□□ -1.28
SCFD1-205ENST00000469043 CCDC27Q2M243 656 aa7.03□□□□□ -1.28
SCFD1-205ENST00000469043 DIEXFQ68CQ4 756 aaKnown RBP7.03□□□□□ -1.28
SCFD1-205ENST00000469043 SLC6A19Q695T7 634 aa7.03□□□□□ -1.28
SCFD1-205ENST00000469043 C1QL4Q86Z23 238 aa7.03□□□□□ -1.28
SCFD1-205ENST00000469043 MYLIPQ8WY64 445 aa7.03□□□□□ -1.28
SCFD1-205ENST00000469043 TMEM59LQ9UK28 342 aa7.03□□□□□ -1.28
SCFD1-205ENST00000469043 PGRP06401 933 aa7.02□□□□□ -1.29
SCFD1-205ENST00000469043 SEPT6Q14141 434 aa7.02□□□□□ -1.29
SCFD1-205ENST00000469043 CREG2Q8IUH2 290 aa7.02□□□□□ -1.29
SCFD1-205ENST00000469043 MRPL41Q8IXM3 137 aaKnown RBP7.02□□□□□ -1.29
SCFD1-205ENST00000469043 TRIT1Q9H3H1 467 aaKnown RBP7.02□□□□□ -1.29
SCFD1-205ENST00000469043 TJP2Q9UDY2 1190 aa7.02□□□□□ -1.29
SCFD1-205ENST00000469043 DNAJC25-GNG10A0A024R161 153 aa7.01□□□□□ -1.29
SCFD1-205ENST00000469043 TCAF2A6NFQ2 919 aa7.01□□□□□ -1.29
SCFD1-205ENST00000469043 ESR1P03372 595 aa7.01□□□□□ -1.29
SCFD1-205ENST00000469043 KRT1P04264 644 aa7.01□□□□□ -1.29
SCFD1-205ENST00000469043 P4HBP07237 508 aaKnown RBP7.01□□□□□ -1.29
SCFD1-205ENST00000469043 GNA15P30679 374 aa7.01□□□□□ -1.29
SCFD1-205ENST00000469043 HK2P52789 917 aa7.01□□□□□ -1.29
SCFD1-205ENST00000469043 RALGPS1Q5JS13 557 aa7.01□□□□□ -1.29
SCFD1-205ENST00000469043 LCNL1Q6ZST4 164 aa7.01□□□□□ -1.29
SCFD1-205ENST00000469043 AMIGO3Q86WK7 504 aa7.01□□□□□ -1.29
SCFD1-205ENST00000469043 KCNN1Q92952 543 aa7.01□□□□□ -1.29
SCFD1-205ENST00000469043 TMEM87BQ96K49 555 aa7.01□□□□□ -1.29
SCFD1-205ENST00000469043 MIR1-1HGQ9H1L0 117 aa7.01□□□□□ -1.29
SCFD1-205ENST00000469043 PCDHB5Q9Y5E4 795 aa7.01□□□□□ -1.29
SCFD1-205ENST00000469043 IVNS1ABPQ9Y6Y0 642 aa7.01□□□□□ -1.29
SCFD1-205ENST00000469043 NPIPB6E9PJ23 425 aa7□□□□□ -1.29
SCFD1-205ENST00000469043 TPP2P29144 1249 aaPredicted RBP7□□□□□ -1.29
SCFD1-205ENST00000469043 LILRA6Q6PI73 481 aa7□□□□□ -1.29
SCFD1-205ENST00000469043 AGMOQ6ZNB7 445 aa7□□□□□ -1.29
SCFD1-205ENST00000469043 ATG14Q6ZNE5 492 aa7□□□□□ -1.29
SCFD1-205ENST00000469043 SYTL4Q96C24 671 aaPredicted RBP7□□□□□ -1.29
SCFD1-205ENST00000469043 SLC26A8Q96RN1 970 aa7□□□□□ -1.29
SCFD1-205ENST00000469043 DPH2Q9BQC3 489 aaPredicted RBP7□□□□□ -1.29
SCFD1-205ENST00000469043 CEP131Q9UPN4 1083 aa7□□□□□ -1.29
SCFD1-205ENST00000469043 HPXP02790 462 aa6.99□□□□□ -1.29
SCFD1-205ENST00000469043 RLBP1P12271 317 aa6.99□□□□□ -1.29
SCFD1-205ENST00000469043 KCNA10Q16322 511 aa6.99□□□□□ -1.29
SCFD1-205ENST00000469043 TSNAXIP1Q2TAA8 658 aa6.99□□□□□ -1.29
SCFD1-205ENST00000469043 CIAPIN1Q6FI81 312 aa6.99□□□□□ -1.29
SCFD1-205ENST00000469043 MCATQ8IVS2 390 aaKnown RBP6.99□□□□□ -1.29
SCFD1-205ENST00000469043 ADAMTS10Q9H324 1103 aa6.99□□□□□ -1.29
SCFD1-205ENST00000469043 GPATCH2Q9NW75 528 aa6.99□□□□□ -1.29
SCFD1-205ENST00000469043 ADAM30Q9UKF2 790 aa6.99□□□□□ -1.29
SCFD1-205ENST00000469043 KCNH3Q9ULD8 1083 aa6.99□□□□□ -1.29
SCFD1-205ENST00000469043 AK5Q9Y6K8 562 aa6.99□□□□□ -1.29
SCFD1-205ENST00000469043 PRPF40AO75400 957 aaKnown RBP6.98□□□□□ -1.29
SCFD1-205ENST00000469043 MED14OSP0DP75 135 aa6.98□□□□□ -1.29
SCFD1-205ENST00000469043 GLDCP23378 1020 aa6.98□□□□□ -1.29
SCFD1-205ENST00000469043 LIG3P49916 1009 aa6.98□□□□□ -1.29
SCFD1-205ENST00000469043 ERVFC1P60507 584 aa6.98□□□□□ -1.29
SCFD1-205ENST00000469043 MAP3K11Q16584 847 aa6.98□□□□□ -1.29
SCFD1-205ENST00000469043 OXR1Q8N573 874 aa6.98□□□□□ -1.29
SCFD1-205ENST00000469043 DUSP15Q9H1R2 295 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-205ENST00000469043 KCNK12Q9HB15 430 aa6.98□□□□□ -1.29
SCFD1-205ENST00000469043 ETV2O00321 342 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-205ENST00000469043 RPL6Q02878 288 aaKnown RBP6.97□□□□□ -1.29
SCFD1-205ENST00000469043 DHX38Q92620 1227 aaKnown RBP6.97□□□□□ -1.29
SCFD1-205ENST00000469043 Q96M66 194 aa6.97□□□□□ -1.29
SCFD1-205ENST00000469043 CD320Q9NPF0 282 aa6.97□□□□□ -1.29
SCFD1-205ENST00000469043 DUSP13Q9UII6 198 aa6.97□□□□□ -1.29
SCFD1-205ENST00000469043 SMG5Q9UPR3 1016 aaKnown RBP6.97□□□□□ -1.29
SCFD1-205ENST00000469043 SND1Q7KZF4 910 aaKnown RBP eCLIP6.96□□□□□ -1.3
SCFD1-205ENST00000469043 LILRA2Q8N149 483 aa6.96□□□□□ -1.3
SCFD1-205ENST00000469043 PDZD8Q8NEN9 1154 aa6.96□□□□□ -1.3
SCFD1-205ENST00000469043 DNAJB8Q8NHS0 232 aa6.96□□□□□ -1.3
SCFD1-205ENST00000469043 JARID2Q92833 1246 aaPredicted RBP6.96□□□□□ -1.3
SCFD1-205ENST00000469043 GPR62Q9BZJ7 368 aa6.96□□□□□ -1.3
SCFD1-205ENST00000469043 RAPGEFL1Q9UHV5 662 aa6.96□□□□□ -1.3
SCFD1-205ENST00000469043 WASH4PA8MWX3 477 aa6.95□□□□□ -1.3
SCFD1-205ENST00000469043 EGR3Q06889 387 aa6.95□□□□□ -1.3
SCFD1-205ENST00000469043 GAB4Q2WGN9 574 aa6.95□□□□□ -1.3
SCFD1-205ENST00000469043 TTLL10Q6ZVT0 673 aa6.95□□□□□ -1.3
SCFD1-205ENST00000469043 FAM177A1Q8N128 213 aaPredicted RBP6.95□□□□□ -1.3
SCFD1-205ENST00000469043 ACSF2Q96CM8 615 aaPredicted RBP6.95□□□□□ -1.3
SCFD1-205ENST00000469043 KRTAP9-7A8MTY7 169 aa6.94□□□□□ -1.3
SCFD1-205ENST00000469043 NUAK1O60285 661 aa6.94□□□□□ -1.3
SCFD1-205ENST00000469043 SRFP11831 508 aa6.94□□□□□ -1.3
SCFD1-205ENST00000469043 TFE3P19532 575 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-205ENST00000469043 LTKP29376 864 aa6.94□□□□□ -1.3
SCFD1-205ENST00000469043 YARSP54577 528 aaKnown RBP6.94□□□□□ -1.3
SCFD1-205ENST00000469043 TSPYL5Q86VY4 417 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-205ENST00000469043 SPPL2CQ8IUH8 684 aa6.94□□□□□ -1.3
SCFD1-205ENST00000469043 SLC6A17Q9H1V8 727 aa6.94□□□□□ -1.3
SCFD1-205ENST00000469043 FITM1A5D6W6 292 aa6.93□□□□□ -1.3
SCFD1-205ENST00000469043 UNCXA6NJT0 531 aa6.93□□□□□ -1.3
SCFD1-205ENST00000469043 PLCG1P19174 1290 aa6.93□□□□□ -1.3
SCFD1-205ENST00000469043 TRHRP34981 398 aaPredicted RBP6.93□□□□□ -1.3
SCFD1-205ENST00000469043 IRF2BP1Q8IU81 584 aa6.93□□□□□ -1.3
SCFD1-205ENST00000469043 DTWD2Q8NBA8 298 aa6.93□□□□□ -1.3
SCFD1-205ENST00000469043 FAM13CQ8NE31 585 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms