RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 CNKSR2Q8WXI2 1034 aa18.89■□□□□ 0.61
GPC1-207ENST00000466624 CAPNS2Q96L46 248 aa18.89■□□□□ 0.61
GPC1-207ENST00000466624 B4E1Z4 1266 aa18.88■□□□□ 0.61
GPC1-207ENST00000466624 IRF6O14896 467 aa18.88■□□□□ 0.61
GPC1-207ENST00000466624 KDM4AO75164 1064 aa18.88■□□□□ 0.61
GPC1-207ENST00000466624 NOVP48745 357 aa18.88■□□□□ 0.61
GPC1-207ENST00000466624 HTRA3P83110 453 aa18.88■□□□□ 0.61
GPC1-207ENST00000466624 ICA1Q05084 483 aa18.88■□□□□ 0.61
GPC1-207ENST00000466624 NOGQ13253 232 aa18.88■□□□□ 0.61
GPC1-207ENST00000466624 CCDC178Q5BJE1 867 aa18.88■□□□□ 0.61
GPC1-207ENST00000466624 CYP4F22Q6NT55 531 aa18.88■□□□□ 0.61
GPC1-207ENST00000466624 PAXIP1Q6ZW49 1069 aaPredicted RBP18.88■□□□□ 0.61
GPC1-207ENST00000466624 NYAP2Q9P242 653 aa18.88■□□□□ 0.61
GPC1-207ENST00000466624 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.88■□□□□ 0.61
GPC1-207ENST00000466624 SYNPO2Q9UMS6 1093 aa18.88■□□□□ 0.61
GPC1-207ENST00000466624 SNX14Q9Y5W7 946 aa18.88■□□□□ 0.61
GPC1-207ENST00000466624 ANAPC15P60006 121 aa18.87■□□□□ 0.61
GPC1-207ENST00000466624 IQCA1Q86XH1 822 aa18.87■□□□□ 0.61
GPC1-207ENST00000466624 MB21D2Q8IYB1 491 aaPredicted RBP18.87■□□□□ 0.61
GPC1-207ENST00000466624 IL17RAQ96F46 866 aa18.87■□□□□ 0.61
GPC1-207ENST00000466624 MTA3Q9BTC8 594 aa18.87■□□□□ 0.61
GPC1-207ENST00000466624 BACH2Q9BYV9 841 aa18.87■□□□□ 0.61
GPC1-207ENST00000466624 SH2D4AQ9H788 454 aa18.87■□□□□ 0.61
GPC1-207ENST00000466624 ARHGEF10LQ9HCE6 1279 aa18.87■□□□□ 0.61
GPC1-207ENST00000466624 MTMR4Q9NYA4 1195 aa18.87■□□□□ 0.61
GPC1-207ENST00000466624 ZSWIM5Q9P217 1185 aa18.87■□□□□ 0.61
GPC1-207ENST00000466624 WDR33Q9C0J8 1336 aaKnown RBP18.86■□□□□ 0.61
GPC1-207ENST00000466624 C19orf81C9J6K1 198 aa18.86■□□□□ 0.61
GPC1-207ENST00000466624 USP17L10C9JJH3 530 aa18.86■□□□□ 0.61
GPC1-207ENST00000466624 HMGB1P09429 215 aaKnown RBP18.86■□□□□ 0.61
GPC1-207ENST00000466624 GTF2A2P52657 109 aa18.86■□□□□ 0.61
GPC1-207ENST00000466624 SNAPC2Q13487 334 aa18.86■□□□□ 0.61
GPC1-207ENST00000466624 SH3D19Q5HYK7 790 aa18.86■□□□□ 0.61
GPC1-207ENST00000466624 CCDC84Q86UT8 332 aaPredicted RBP18.86■□□□□ 0.61
GPC1-207ENST00000466624 REM2Q8IYK8 340 aaPredicted RBP18.86■□□□□ 0.61
GPC1-207ENST00000466624 NKX2-3Q8TAU0 364 aa18.86■□□□□ 0.61
GPC1-207ENST00000466624 MKL1Q969V6 931 aa18.86■□□□□ 0.61
GPC1-207ENST00000466624 CEP95Q96GE4 821 aa18.86■□□□□ 0.61
GPC1-207ENST00000466624 NEK1Q96PY6 1258 aa18.86■□□□□ 0.61
GPC1-207ENST00000466624 IL17RBQ9NRM6 502 aa18.86■□□□□ 0.61
GPC1-207ENST00000466624 WDR19Q8NEZ3 1342 aa18.85■□□□□ 0.61
GPC1-207ENST00000466624 A0A0G2JLL6 359 aaPredicted RBP18.85■□□□□ 0.61
GPC1-207ENST00000466624 MANSC4A6NHS7 340 aaPredicted RBP18.85■□□□□ 0.61
GPC1-207ENST00000466624 TTLL1O95922 423 aa18.85■□□□□ 0.61
GPC1-207ENST00000466624 EEF2P13639 858 aaKnown RBP18.85■□□□□ 0.61
GPC1-207ENST00000466624 VEGFBP49765 207 aa18.85■□□□□ 0.61
GPC1-207ENST00000466624 USP14P54578 494 aa18.85■□□□□ 0.61
GPC1-207ENST00000466624 BACE1P56817 501 aa18.85■□□□□ 0.61
GPC1-207ENST00000466624 INHBEP58166 350 aa18.85■□□□□ 0.61
GPC1-207ENST00000466624 SPP2Q13103 211 aa18.85■□□□□ 0.61
GPC1-207ENST00000466624 PRRT2Q7Z6L0 340 aaPredicted RBP18.85■□□□□ 0.61
GPC1-207ENST00000466624 SIAH1Q8IUQ4 282 aa18.85■□□□□ 0.61
GPC1-207ENST00000466624 MS4A4AQ96JQ5 239 aa18.85■□□□□ 0.61
GPC1-207ENST00000466624 TTC14Q96N46 770 aa18.85■□□□□ 0.61
GPC1-207ENST00000466624 KIAA1683Q9H0B3 1180 aa18.85■□□□□ 0.61
GPC1-207ENST00000466624 UPF2Q9HAU5 1272 aaKnown RBP18.85■□□□□ 0.61
GPC1-207ENST00000466624 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.85■□□□□ 0.61
GPC1-207ENST00000466624 TMX2Q9Y320 296 aa18.85■□□□□ 0.61
GPC1-207ENST00000466624 TESPA1A2RU30 521 aaPredicted RBP18.84■□□□□ 0.61
GPC1-207ENST00000466624 TRIM75PA6NK02 468 aa18.84■□□□□ 0.61
GPC1-207ENST00000466624 CETPP11597 493 aa18.84■□□□□ 0.61
GPC1-207ENST00000466624 PSMA5P28066 241 aa18.84■□□□□ 0.61
GPC1-207ENST00000466624 MCM5P33992 734 aa18.84■□□□□ 0.61
GPC1-207ENST00000466624 MAP2K2P36507 400 aa18.84■□□□□ 0.61
GPC1-207ENST00000466624 ADCK5Q3MIX3 580 aa18.84■□□□□ 0.61
GPC1-207ENST00000466624 CYB5R4Q7L1T6 521 aa18.84■□□□□ 0.61
GPC1-207ENST00000466624 DGKHQ86XP1 1220 aa18.84■□□□□ 0.61
GPC1-207ENST00000466624 CLEC10AQ8IUN9 316 aa18.84■□□□□ 0.61
GPC1-207ENST00000466624 ZSCAN10Q96SZ4 725 aaPredicted RBP18.84■□□□□ 0.61
GPC1-207ENST00000466624 A0A1W2PRG0 241 aa18.83■□□□□ 0.6
GPC1-207ENST00000466624 NMT2O60551 498 aa18.83■□□□□ 0.6
GPC1-207ENST00000466624 SREBF2Q12772 1141 aa18.83■□□□□ 0.6
GPC1-207ENST00000466624 MTMR2Q13614 643 aa18.83■□□□□ 0.6
GPC1-207ENST00000466624 SART3Q15020 963 aaKnown RBP18.83■□□□□ 0.6
GPC1-207ENST00000466624 PROCA1Q8NCQ7 364 aaPredicted RBP18.83■□□□□ 0.6
GPC1-207ENST00000466624 ACER1Q8TDN7 264 aa18.83■□□□□ 0.6
GPC1-207ENST00000466624 ANKS1AQ92625 1134 aa18.83■□□□□ 0.6
GPC1-207ENST00000466624 C12orf42Q96LP6 360 aa18.83■□□□□ 0.6
GPC1-207ENST00000466624 FEZ1Q99689 392 aa18.83■□□□□ 0.6
GPC1-207ENST00000466624 UBAC1Q9BSL1 405 aa18.83■□□□□ 0.6
GPC1-207ENST00000466624 TM6SF1Q9BZW5 370 aa18.83■□□□□ 0.6
GPC1-207ENST00000466624 TNKSO95271 1327 aa18.82■□□□□ 0.6
GPC1-207ENST00000466624 RBM25P49756 843 aaKnown RBP18.82■□□□□ 0.6
GPC1-207ENST00000466624 ANTXR2P58335 489 aa18.82■□□□□ 0.6
GPC1-207ENST00000466624 MKRN3Q13064 507 aaKnown RBP18.82■□□□□ 0.6
GPC1-207ENST00000466624 RCSD1Q6JBY9 416 aa18.82■□□□□ 0.6
GPC1-207ENST00000466624 USP17L2Q6R6M4 530 aa18.82■□□□□ 0.6
GPC1-207ENST00000466624 DHX32Q7L7V1 743 aaKnown RBP18.82■□□□□ 0.6
GPC1-207ENST00000466624 FASTKD5Q7L8L6 764 aaKnown RBP18.82■□□□□ 0.6
GPC1-207ENST00000466624 TMEM87BQ96K49 555 aa18.82■□□□□ 0.6
GPC1-207ENST00000466624 JAKMIP1Q96N16 626 aaKnown RBP18.82■□□□□ 0.6
GPC1-207ENST00000466624 CLIP2Q9UDT6 1046 aa18.82■□□□□ 0.6
GPC1-207ENST00000466624 STX8Q9UNK0 236 aa18.82■□□□□ 0.6
GPC1-207ENST00000466624 CCL15-CCL14A0A0B4J2E2 113 aa18.81■□□□□ 0.6
GPC1-207ENST00000466624 ERICH2A1L162 156 aa18.81■□□□□ 0.6
GPC1-207ENST00000466624 PRC1O43663 620 aa18.81■□□□□ 0.6
GPC1-207ENST00000466624 TOP1P11387 765 aaKnown RBP18.81■□□□□ 0.6
GPC1-207ENST00000466624 TM4SF4P48230 202 aa18.81■□□□□ 0.6
GPC1-207ENST00000466624 HMGCS2P54868 508 aa18.81■□□□□ 0.6
GPC1-207ENST00000466624 EXOSC10Q01780 885 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms