RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 CRACR2BQ8N4Y2 399 aaPredicted RBP14.45□□□□□ -0.1
CNOT4-208ENST00000465721 C12orf42Q96LP6 360 aa14.45□□□□□ -0.1
CNOT4-208ENST00000465721 TRIM34Q9BYJ4 488 aa14.45□□□□□ -0.1
CNOT4-208ENST00000465721 GPR108Q9NPR9 543 aa14.45□□□□□ -0.1
CNOT4-208ENST00000465721 SAP30BPQ9UHR5 308 aaKnown RBP14.45□□□□□ -0.1
CNOT4-208ENST00000465721 MAP2K5Q13163 448 aa14.44□□□□□ -0.1
CNOT4-208ENST00000465721 G3BP1Q13283 466 aaKnown RBP eCLIP14.44□□□□□ -0.1
CNOT4-208ENST00000465721 TNNI3KQ59H18 835 aa14.44□□□□□ -0.1
CNOT4-208ENST00000465721 USP17L2Q6R6M4 530 aa14.44□□□□□ -0.1
CNOT4-208ENST00000465721 DBNDD2Q9BQY9 259 aa14.44□□□□□ -0.1
CNOT4-208ENST00000465721 FLRT1Q9NZU1 646 aa14.44□□□□□ -0.1
CNOT4-208ENST00000465721 FPGT-TNNI3KV9GXZ4 949 aa14.44□□□□□ -0.1
CNOT4-208ENST00000465721 BAZ2AQ9UIF9 1905 aaKnown RBP14.43□□□□□ -0.1
CNOT4-208ENST00000465721 GH2P01242 217 aa14.43□□□□□ -0.1
CNOT4-208ENST00000465721 HLA-DOAP06340 250 aa14.43□□□□□ -0.1
CNOT4-208ENST00000465721 MDM2Q00987 491 aaPredicted RBP14.43□□□□□ -0.1
CNOT4-208ENST00000465721 TTC39AQ5SRH9 613 aa14.43□□□□□ -0.1
CNOT4-208ENST00000465721 PIH1D3Q9NQM4 214 aaKnown RBP14.43□□□□□ -0.1
CNOT4-208ENST00000465721 RABGAP1Q9Y3P9 1069 aa14.43□□□□□ -0.1
CNOT4-208ENST00000465721 VCAM1P19320 739 aa14.42□□□□□ -0.1
CNOT4-208ENST00000465721 ZAP70P43403 619 aa14.42□□□□□ -0.1
CNOT4-208ENST00000465721 DYNLL1P63167 89 aaKnown RBP14.42□□□□□ -0.1
CNOT4-208ENST00000465721 CCAR1Q8IX12 1150 aaKnown RBP14.42□□□□□ -0.1
CNOT4-208ENST00000465721 ZNF512BQ96KM6 892 aaPredicted RBP14.42□□□□□ -0.1
CNOT4-208ENST00000465721 GUCD1Q96NT3 240 aa14.42□□□□□ -0.1
CNOT4-208ENST00000465721 FEZ1Q99689 392 aa14.42□□□□□ -0.1
CNOT4-208ENST00000465721 MYH7P12883 1935 aa14.42□□□□□ -0.1
CNOT4-208ENST00000465721 MUC3AQ02505 3323 aa14.42□□□□□ -0.1
CNOT4-208ENST00000465721 POTEB2H3BUK9 544 aa14.41□□□□□ -0.1
CNOT4-208ENST00000465721 IGSF3O75054 1194 aa14.41□□□□□ -0.1
CNOT4-208ENST00000465721 IGHA2P01877 340 aa14.41□□□□□ -0.1
CNOT4-208ENST00000465721 HOXC6P09630 235 aa14.41□□□□□ -0.1
CNOT4-208ENST00000465721 GRB14Q14449 540 aa14.41□□□□□ -0.1
CNOT4-208ENST00000465721 ZYXQ15942 572 aaKnown RBP14.41□□□□□ -0.1
CNOT4-208ENST00000465721 CCDC158Q5M9N0 1113 aa14.41□□□□□ -0.1
CNOT4-208ENST00000465721 TATDN1Q6P1N9 297 aa14.41□□□□□ -0.1
CNOT4-208ENST00000465721 ATF7IPQ6VMQ6 1270 aa14.41□□□□□ -0.1
CNOT4-208ENST00000465721 LBX2Q6XYB7 198 aa14.41□□□□□ -0.1
CNOT4-208ENST00000465721 DDX20Q9UHI6 824 aaKnown RBP14.41□□□□□ -0.1
CNOT4-208ENST00000465721 NDUFB9Q9Y6M9 179 aa14.41□□□□□ -0.1
CNOT4-208ENST00000465721 MYO9BQ13459 2157 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 SLC15A5A6NIM6 579 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 USP17L15C9J2P7 530 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 USP17L13C9JLJ4 530 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 USP17L11C9JVI0 530 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 USP17L18D6R9N7 530 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 USP17L22D6RA61 530 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 USP17L17D6RBQ6 530 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 USP17L19D6RCP7 530 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 USP17L20D6RJB6 530 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 ABCB7O75027 752 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 PTPREP23469 700 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 CCNA1P78396 465 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 USP17L24Q0WX57 530 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 MFSD14CQ5VZR4 134 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 FAM109BQ6ICB4 259 aaPredicted RBP14.4□□□□□ -0.1
CNOT4-208ENST00000465721 CATSPERGQ6ZRH7 1159 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 SSH3Q8TE77 659 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 EDC3Q96F86 508 aaKnown RBP14.4□□□□□ -0.1
CNOT4-208ENST00000465721 COL25A1Q9BXS0 654 aaPredicted RBP14.4□□□□□ -0.1
CNOT4-208ENST00000465721 KIAA1683Q9H0B3 1180 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 EHD4Q9H223 541 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 CWC22Q9HCG8 908 aaKnown RBP14.4□□□□□ -0.1
CNOT4-208ENST00000465721 TLR7Q9NYK1 1049 aaKnown RBP14.4□□□□□ -0.1
CNOT4-208ENST00000465721 BTBD7Q9P203 1132 aa14.4□□□□□ -0.1
CNOT4-208ENST00000465721 DBNLQ9UJU6 430 aaKnown RBP14.4□□□□□ -0.1
CNOT4-208ENST00000465721 SPDYE16A6NNV3 312 aaPredicted RBP14.39□□□□□ -0.11
CNOT4-208ENST00000465721 MSCO60682 206 aa14.39□□□□□ -0.11
CNOT4-208ENST00000465721 GLRX3O76003 335 aaKnown RBP14.39□□□□□ -0.11
CNOT4-208ENST00000465721 CYP7A1P22680 504 aa14.39□□□□□ -0.11
CNOT4-208ENST00000465721 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.39□□□□□ -0.11
CNOT4-208ENST00000465721 MIGA1Q8NAN2 632 aa14.39□□□□□ -0.11
CNOT4-208ENST00000465721 TRPV1Q8NER1 839 aa14.39□□□□□ -0.11
CNOT4-208ENST00000465721 NPLOC4Q8TAT6 608 aa14.39□□□□□ -0.11
CNOT4-208ENST00000465721 ACER1Q8TDN7 264 aa14.39□□□□□ -0.11
CNOT4-208ENST00000465721 LPAR1Q92633 364 aa14.39□□□□□ -0.11
CNOT4-208ENST00000465721 SENP6Q9GZR1 1112 aaPredicted RBP14.39□□□□□ -0.11
CNOT4-208ENST00000465721 SERPINB13Q9UIV8 391 aa14.39□□□□□ -0.11
CNOT4-208ENST00000465721 DNM1LO00429 736 aa14.38□□□□□ -0.11
CNOT4-208ENST00000465721 IPO8O15397 1037 aaKnown RBP14.38□□□□□ -0.11
CNOT4-208ENST00000465721 CYBAP13498 195 aa14.38□□□□□ -0.11
CNOT4-208ENST00000465721 CYP2C19P33261 490 aa14.38□□□□□ -0.11
CNOT4-208ENST00000465721 ATN1P54259 1190 aaPredicted RBP14.38□□□□□ -0.11
CNOT4-208ENST00000465721 USP14P54578 494 aa14.38□□□□□ -0.11
CNOT4-208ENST00000465721 WDR78Q5VTH9 848 aa14.38□□□□□ -0.11
CNOT4-208ENST00000465721 CLUAP1Q96AJ1 413 aa14.38□□□□□ -0.11
CNOT4-208ENST00000465721 NCOR1O75376 2440 aa14.38□□□□□ -0.11
CNOT4-208ENST00000465721 BCAR3O75815 825 aa14.37□□□□□ -0.11
CNOT4-208ENST00000465721 IDH1O75874 414 aaKnown RBP14.37□□□□□ -0.11
CNOT4-208ENST00000465721 GUCY1A2P33402 732 aa14.37□□□□□ -0.11
CNOT4-208ENST00000465721 SHMT1P34896 483 aa14.37□□□□□ -0.11
CNOT4-208ENST00000465721 RTP1P59025 263 aa14.37□□□□□ -0.11
CNOT4-208ENST00000465721 OS9Q13438 667 aaPredicted RBP14.37□□□□□ -0.11
CNOT4-208ENST00000465721 RAB3GAP1Q15042 981 aa14.37□□□□□ -0.11
CNOT4-208ENST00000465721 ABCB5Q2M3G0 1257 aa14.37□□□□□ -0.11
CNOT4-208ENST00000465721 CERS3Q8IU89 383 aa14.37□□□□□ -0.11
CNOT4-208ENST00000465721 TMEM57Q8N5G2 664 aa14.37□□□□□ -0.11
CNOT4-208ENST00000465721 FRAT1Q92837 279 aaPredicted RBP14.37□□□□□ -0.11
CNOT4-208ENST00000465721 LBHD1Q9BQE6 289 aaPredicted RBP14.37□□□□□ -0.11
CNOT4-208ENST00000465721 IVNS1ABPQ9Y6Y0 642 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms