RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 USP17L18D6R9N7 530 aa17.26■□□□□ 0.35
ATG4B-214ENST00000465399 USP17L22D6RA61 530 aa17.26■□□□□ 0.35
ATG4B-214ENST00000465399 USP17L17D6RBQ6 530 aa17.26■□□□□ 0.35
ATG4B-214ENST00000465399 USP17L19D6RCP7 530 aa17.26■□□□□ 0.35
ATG4B-214ENST00000465399 USP17L20D6RJB6 530 aa17.26■□□□□ 0.35
ATG4B-214ENST00000465399 CCNA1P78396 465 aa17.26■□□□□ 0.35
ATG4B-214ENST00000465399 USP17L24Q0WX57 530 aa17.26■□□□□ 0.35
ATG4B-214ENST00000465399 TTF1Q15361 905 aaPredicted RBP17.26■□□□□ 0.35
ATG4B-214ENST00000465399 ABCB5Q2M3G0 1257 aa17.26■□□□□ 0.35
ATG4B-214ENST00000465399 Q3C1V9 767 aa17.26■□□□□ 0.35
ATG4B-214ENST00000465399 PLEKHH3Q7Z736 793 aa17.26■□□□□ 0.35
ATG4B-214ENST00000465399 CABP5Q9NP86 173 aa17.26■□□□□ 0.35
ATG4B-214ENST00000465399 STAP2Q9UGK3 403 aa17.26■□□□□ 0.35
ATG4B-214ENST00000465399 MYH7P12883 1935 aa17.25■□□□□ 0.35
ATG4B-214ENST00000465399 GLRX3O76003 335 aaKnown RBP17.25■□□□□ 0.35
ATG4B-214ENST00000465399 USP6NLQ92738 828 aa17.25■□□□□ 0.35
ATG4B-214ENST00000465399 APBA2Q99767 749 aa17.25■□□□□ 0.35
ATG4B-214ENST00000465399 KIAA1683Q9H0B3 1180 aa17.25■□□□□ 0.35
ATG4B-214ENST00000465399 RABGAP1Q9Y3P9 1069 aa17.25■□□□□ 0.35
ATG4B-214ENST00000465399 MAGEB6P1A0A0J9YX57 407 aa17.24■□□□□ 0.35
ATG4B-214ENST00000465399 POLR3DP05423 398 aaPredicted RBP17.24■□□□□ 0.35
ATG4B-214ENST00000465399 MORN1Q5T089 497 aa17.24■□□□□ 0.35
ATG4B-214ENST00000465399 IL1RAPL2Q9NP60 686 aa17.24■□□□□ 0.35
ATG4B-214ENST00000465399 VCAM1P19320 739 aa17.23■□□□□ 0.35
ATG4B-214ENST00000465399 SHMT1P34896 483 aa17.23■□□□□ 0.35
ATG4B-214ENST00000465399 MNX1P50219 401 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-214ENST00000465399 PLCD1P51178 756 aa17.23■□□□□ 0.35
ATG4B-214ENST00000465399 CACNB2Q08289 660 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-214ENST00000465399 CCL14Q16627 93 aa17.23■□□□□ 0.35
ATG4B-214ENST00000465399 SLC9C2Q5TAH2 1124 aa17.23■□□□□ 0.35
ATG4B-214ENST00000465399 WDR78Q5VTH9 848 aa17.23■□□□□ 0.35
ATG4B-214ENST00000465399 CATSPERGQ6ZRH7 1159 aa17.23■□□□□ 0.35
ATG4B-214ENST00000465399 CLASRPQ8N2M8 674 aaKnown RBP17.23■□□□□ 0.35
ATG4B-214ENST00000465399 RHPN1Q8TCX5 695 aa17.23■□□□□ 0.35
ATG4B-214ENST00000465399 PANK1Q8TE04 598 aa17.23■□□□□ 0.35
ATG4B-214ENST00000465399 RIOK1Q9BRS2 568 aaKnown RBP17.23■□□□□ 0.35
ATG4B-214ENST00000465399 CRNKL1Q9BZJ0 848 aaKnown RBP17.23■□□□□ 0.35
ATG4B-214ENST00000465399 ZMYND8Q9ULU4 1186 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-214ENST00000465399 BAZ2AQ9UIF9 1905 aaKnown RBP17.23■□□□□ 0.35
ATG4B-214ENST00000465399 MS4A1P11836 297 aa17.22■□□□□ 0.35
ATG4B-214ENST00000465399 BMP8BP34820 402 aa17.22■□□□□ 0.35
ATG4B-214ENST00000465399 MAP2K5Q13163 448 aa17.22■□□□□ 0.35
ATG4B-214ENST00000465399 POTEEQ6S8J3 1075 aa17.22■□□□□ 0.35
ATG4B-214ENST00000465399 ACER1Q8TDN7 264 aa17.22■□□□□ 0.35
ATG4B-214ENST00000465399 LAMA3Q16787 3333 aa17.22■□□□□ 0.35
ATG4B-214ENST00000465399 ZBED9Q6R2W3 1325 aa17.21■□□□□ 0.35
ATG4B-214ENST00000465399 A0A0G2JMZ2 1700 aa17.21■□□□□ 0.35
ATG4B-214ENST00000465399 ZNF236Q9UL36 1845 aa17.21■□□□□ 0.35
ATG4B-214ENST00000465399 CNMDO75829 334 aa17.21■□□□□ 0.35
ATG4B-214ENST00000465399 PDE6AP16499 860 aa17.21■□□□□ 0.35
ATG4B-214ENST00000465399 CCND3P30281 292 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-214ENST00000465399 LBX2Q6XYB7 198 aa17.21■□□□□ 0.35
ATG4B-214ENST00000465399 KIF1BPQ96EK5 621 aa17.21■□□□□ 0.35
ATG4B-214ENST00000465399 EDC3Q96F86 508 aaKnown RBP17.21■□□□□ 0.35
ATG4B-214ENST00000465399 DNAJC2Q99543 621 aaKnown RBP17.21■□□□□ 0.35
ATG4B-214ENST00000465399 GDF15Q99988 308 aa17.21■□□□□ 0.35
ATG4B-214ENST00000465399 RPAP3Q9H6T3 665 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-214ENST00000465399 MCM9Q9NXL9 1143 aa17.21■□□□□ 0.35
ATG4B-214ENST00000465399 IVNS1ABPQ9Y6Y0 642 aa17.21■□□□□ 0.35
ATG4B-214ENST00000465399 PFASO15067 1338 aa17.21■□□□□ 0.34
ATG4B-214ENST00000465399 RLFQ13129 1914 aa17.2■□□□□ 0.34
ATG4B-214ENST00000465399 SLC15A5A6NIM6 579 aa17.2■□□□□ 0.34
ATG4B-214ENST00000465399 APBB1O00213 710 aa17.2■□□□□ 0.34
ATG4B-214ENST00000465399 MPHOSPH10O00566 681 aaKnown RBP17.2■□□□□ 0.34
ATG4B-214ENST00000465399 HMMRO75330 724 aa17.2■□□□□ 0.34
ATG4B-214ENST00000465399 IFIT2P09913 472 aaKnown RBP17.2■□□□□ 0.34
ATG4B-214ENST00000465399 MFSD14CQ5VZR4 134 aa17.2■□□□□ 0.34
ATG4B-214ENST00000465399 MIER1Q8N108 512 aa17.2■□□□□ 0.34
ATG4B-214ENST00000465399 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.2■□□□□ 0.34
ATG4B-214ENST00000465399 ZNF532Q9HCE3 1301 aa17.2■□□□□ 0.34
ATG4B-214ENST00000465399 PARP14Q460N5 1801 aa17.19■□□□□ 0.34
ATG4B-214ENST00000465399 GOLIM4O00461 696 aa17.19■□□□□ 0.34
ATG4B-214ENST00000465399 SOX1O00570 391 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-214ENST00000465399 SYN1P17600 705 aa17.19■□□□□ 0.34
ATG4B-214ENST00000465399 PTPREP23469 700 aa17.19■□□□□ 0.34
ATG4B-214ENST00000465399 GABPAQ06546 454 aa17.19■□□□□ 0.34
ATG4B-214ENST00000465399 SEPT2Q15019 361 aa17.19■□□□□ 0.34
ATG4B-214ENST00000465399 LHX8Q68G74 356 aa17.19■□□□□ 0.34
ATG4B-214ENST00000465399 RPAP2Q8IXW5 612 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-214ENST00000465399 LRCH3Q96II8 777 aa17.19■□□□□ 0.34
ATG4B-214ENST00000465399 BCL11AQ9H165 835 aa17.19■□□□□ 0.34
ATG4B-214ENST00000465399 BTBD7Q9P203 1132 aa17.19■□□□□ 0.34
ATG4B-214ENST00000465399 SPDYE16A6NNV3 312 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-214ENST00000465399 COL6A1P12109 1028 aa17.18■□□□□ 0.34
ATG4B-214ENST00000465399 GUCY1A2P33402 732 aa17.18■□□□□ 0.34
ATG4B-214ENST00000465399 ATP2B2Q01814 1243 aa17.18■□□□□ 0.34
ATG4B-214ENST00000465399 GRB14Q14449 540 aa17.18■□□□□ 0.34
ATG4B-214ENST00000465399 SDR42E1Q8WUS8 393 aa17.18■□□□□ 0.34
ATG4B-214ENST00000465399 DCP1AQ9NPI6 582 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-214ENST00000465399 DDX19BQ9UMR2 479 aa17.18■□□□□ 0.34
ATG4B-214ENST00000465399 ZNFX1Q9P2E3 1918 aaKnown RBP17.17■□□□□ 0.34
ATG4B-214ENST00000465399 COL11A1P12107 1806 aaPredicted RBP17.17■□□□□ 0.34
ATG4B-214ENST00000465399 TCRBV5S4A2TA0A5A2 114 aa17.17■□□□□ 0.34
ATG4B-214ENST00000465399 MSCO60682 206 aa17.17■□□□□ 0.34
ATG4B-214ENST00000465399 MAGEA10P43363 369 aaPredicted RBP17.17■□□□□ 0.34
ATG4B-214ENST00000465399 COG2Q14746 738 aa17.17■□□□□ 0.34
ATG4B-214ENST00000465399 TMEM179Q6ZVK1 233 aa17.17■□□□□ 0.34
ATG4B-214ENST00000465399 LCORLQ8N3X6 602 aa17.17■□□□□ 0.34
ATG4B-214ENST00000465399 TANGO6Q9C0B7 1094 aa17.17■□□□□ 0.34
ATG4B-214ENST00000465399 SWAP70Q9UH65 585 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms