RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 YY1AP1Q9H869 796 aa8.27□□□□□ -1.09
USP48-206ENST00000464577 STRN4Q9NRL3 753 aa8.27□□□□□ -1.09
USP48-206ENST00000464577 NLRP2Q9NX02 1062 aa8.27□□□□□ -1.09
USP48-206ENST00000464577 LIMA1Q9UHB6 759 aaKnown RBP8.27□□□□□ -1.09
USP48-206ENST00000464577 DENND2AQ9ULE3 1009 aa8.27□□□□□ -1.09
USP48-206ENST00000464577 SLC12A7Q9Y666 1083 aa8.27□□□□□ -1.09
USP48-206ENST00000464577 AKAP11Q9UKA4 1901 aa8.27□□□□□ -1.09
USP48-206ENST00000464577 ADAMTSL3P82987 1691 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 A0A0U1RQJ8 604 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 DEXIO95424 95 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 CPP00450 1065 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 RHOXF2BP0C7M4 288 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 CASP14P31944 242 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 SPAG1Q07617 926 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 TTC31Q49AM3 519 aaPredicted RBP8.26□□□□□ -1.09
USP48-206ENST00000464577 MAP9Q49MG5 647 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 LRRC31Q6UY01 552 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 CYP26C1Q6V0L0 522 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 CCDC148Q8NFR7 591 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 ATRIPQ8WXE1 791 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 PPM1EQ8WY54 764 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 CCDC102AQ96A19 550 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 RHOXF2Q9BQY4 288 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 CNNM2Q9H8M5 875 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 BRMS1Q9HCU9 246 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 SEC31BQ9NQW1 1179 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 MYO6Q9UM54 1294 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 COL22A1Q8NFW1 1626 aaPredicted RBP8.26□□□□□ -1.09
USP48-206ENST00000464577 KCPQ6ZWJ8 1503 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 TARSL2A2RTX5 802 aaKnown RBP8.26□□□□□ -1.09
USP48-206ENST00000464577 SPDYE2BA6NHP3 402 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 LRRC10BA6NIK2 292 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 LRRIQ3A6PVS8 624 aaPredicted RBP8.26□□□□□ -1.09
USP48-206ENST00000464577 EIF3CLB5ME19 914 aaKnown RBP8.26□□□□□ -1.09
USP48-206ENST00000464577 PPP1R3GB7ZBB8 358 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 PITPNM1O00562 1244 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 PPFIA4O75335 1185 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 BMP15O95972 392 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 SPDYE6P0CI01 402 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 CD44P16070 742 aaKnown RBP8.26□□□□□ -1.09
USP48-206ENST00000464577 MCAMP43121 646 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 FXR1P51114 621 aaKnown RBP eCLIP8.26□□□□□ -1.09
USP48-206ENST00000464577 USP14P54578 494 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 ERVK-24P63145 666 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 DPYDQ12882 1025 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 RTN1Q16799 776 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 SPDYE2Q495Y8 402 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 ICE2Q659A1 982 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 TRAPPC11Q7Z392 1133 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 ACRBPQ8NEB7 543 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 PAGE5Q96GU1 130 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 RPGRIP1Q96KN7 1286 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 CDC5LQ99459 802 aaKnown RBP8.26□□□□□ -1.09
USP48-206ENST00000464577 EIF3CQ99613 913 aaKnown RBP8.26□□□□□ -1.09
USP48-206ENST00000464577 FAM107BQ9H098 131 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 CSRNP2Q9H175 543 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 SUGCTQ9HAC7 445 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 ABHD10Q9NUJ1 306 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 IQSEC3Q9UPP2 1182 aaPredicted RBP8.26□□□□□ -1.09
USP48-206ENST00000464577 PCDHB6Q9Y5E3 794 aa8.26□□□□□ -1.09
USP48-206ENST00000464577 CCDC196A0A1B0GTZ2 297 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 PSMD14O00487 310 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 IFIT3O14879 490 aaKnown RBP8.25□□□□□ -1.09
USP48-206ENST00000464577 PRPF6O94906 941 aaKnown RBP8.25□□□□□ -1.09
USP48-206ENST00000464577 CSF1RP07333 972 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 TRIM28Q13263 835 aaKnown RBP8.25□□□□□ -1.09
USP48-206ENST00000464577 FOXR1Q6PIV2 292 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 PI16Q6UXB8 463 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 KRT28Q7Z3Y7 464 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 EFCAB13Q8IY85 973 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 NOA1Q8NC60 698 aaKnown RBP8.25□□□□□ -1.09
USP48-206ENST00000464577 AFAP1L1Q8TED9 768 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 CPLX3Q8WVH0 158 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 ORAI2Q96SN7 254 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 MYL10Q9BUA6 226 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 KRT23Q9C075 422 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 FAM204AQ9H8W3 233 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 DISP2A7MBM2 1401 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 TCRBV5S4A2TA0A5A2 114 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 TRIM75PA6NK02 468 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 UBE2Q2LH0YL09 131 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 RNF40O75150 1001 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 PCCAP05165 728 aaPredicted RBP8.25□□□□□ -1.09
USP48-206ENST00000464577 PDE6AP16499 860 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 GUCY1A2P33402 732 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 CKAP4Q07065 602 aaKnown RBP8.25□□□□□ -1.09
USP48-206ENST00000464577 KRT31Q15323 416 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 TAF7LQ5H9L4 462 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 LMOD2Q6P5Q4 547 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 ZNF662Q6ZS27 426 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 FERMT2Q96AC1 680 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 STRBPQ96SI9 672 aaKnown RBP8.25□□□□□ -1.09
USP48-206ENST00000464577 PIH1D3Q9NQM4 214 aaKnown RBP8.25□□□□□ -1.09
USP48-206ENST00000464577 HPCAL4Q9UM19 191 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 KCNJ14Q9UNX9 436 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 ZNF142P52746 1687 aaPredicted RBP8.25□□□□□ -1.09
USP48-206ENST00000464577 CHD4Q14839 1912 aa8.25□□□□□ -1.09
USP48-206ENST00000464577 ZNF532Q9HCE3 1301 aa8.24□□□□□ -1.09
USP48-206ENST00000464577 ZC3H4Q9UPT8 1303 aaKnown RBP8.24□□□□□ -1.09
USP48-206ENST00000464577 PATL2C9JE40 543 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms