RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 TOP6BLQ8N6T0 577 aa6.35□□□□□ -1.39
KDM3A-208ENST00000463013 ZNF296Q8WUU4 475 aaPredicted RBP6.35□□□□□ -1.39
KDM3A-208ENST00000463013 MKNK2Q9HBH9 465 aa6.35□□□□□ -1.39
KDM3A-208ENST00000463013 PRDM10Q9NQV6 1147 aa6.35□□□□□ -1.39
KDM3A-208ENST00000463013 ADAMTS1Q9UHI8 967 aa6.35□□□□□ -1.39
KDM3A-208ENST00000463013 ROBO2Q9HCK4 1378 aa6.34□□□□□ -1.39
KDM3A-208ENST00000463013 TMEM265A0A087WTH1 108 aa6.34□□□□□ -1.39
KDM3A-208ENST00000463013 NKG7Q16617 165 aa6.34□□□□□ -1.39
KDM3A-208ENST00000463013 IFI16Q16666 785 aaKnown RBP6.34□□□□□ -1.39
KDM3A-208ENST00000463013 REC114Q7Z4M0 266 aa6.34□□□□□ -1.39
KDM3A-208ENST00000463013 USP48Q86UV5 1035 aa6.34□□□□□ -1.39
KDM3A-208ENST00000463013 PLD6Q8N2A8 252 aaKnown RBP6.34□□□□□ -1.39
KDM3A-208ENST00000463013 FBXO27Q8NI29 283 aa6.34□□□□□ -1.39
KDM3A-208ENST00000463013 HRASLS5Q96KN8 279 aa6.34□□□□□ -1.39
KDM3A-208ENST00000463013 LRRC3Q9BY71 257 aa6.34□□□□□ -1.39
KDM3A-208ENST00000463013 FOXQ1Q9C009 403 aa6.34□□□□□ -1.39
KDM3A-208ENST00000463013 ADAM30Q9UKF2 790 aa6.34□□□□□ -1.39
KDM3A-208ENST00000463013 ADAMTS6Q9UKP5 1117 aa6.34□□□□□ -1.39
KDM3A-208ENST00000463013 PRR36Q9H6K5 1346 aa6.33□□□□□ -1.4
KDM3A-208ENST00000463013 AOC3Q16853 763 aa6.33□□□□□ -1.4
KDM3A-208ENST00000463013 ZNF394Q53GI3 561 aa6.33□□□□□ -1.4
KDM3A-208ENST00000463013 CILP2Q8IUL8 1156 aa6.33□□□□□ -1.4
KDM3A-208ENST00000463013 MRPL41Q8IXM3 137 aaKnown RBP6.33□□□□□ -1.4
KDM3A-208ENST00000463013 TJP2Q9UDY2 1190 aa6.33□□□□□ -1.4
KDM3A-208ENST00000463013 POLR3KQ9Y2Y1 108 aaPredicted RBP6.33□□□□□ -1.4
KDM3A-208ENST00000463013 CORINQ9Y5Q5 1042 aa6.33□□□□□ -1.4
KDM3A-208ENST00000463013 TLR3O15455 904 aaKnown RBP6.32□□□□□ -1.4
KDM3A-208ENST00000463013 CST3P01034 146 aaPredicted RBP6.32□□□□□ -1.4
KDM3A-208ENST00000463013 PLCG1P19174 1290 aa6.32□□□□□ -1.4
KDM3A-208ENST00000463013 CWF19L2Q2TBE0 894 aaKnown RBP6.32□□□□□ -1.4
KDM3A-208ENST00000463013 PRAMEF13Q5VWM6 474 aa6.32□□□□□ -1.4
KDM3A-208ENST00000463013 TTLL10Q6ZVT0 673 aa6.32□□□□□ -1.4
KDM3A-208ENST00000463013 METTL16Q86W50 562 aaKnown RBP6.32□□□□□ -1.4
KDM3A-208ENST00000463013 KIAA0825Q8IV33 1275 aa6.32□□□□□ -1.4
KDM3A-208ENST00000463013 MFSD2AQ8NA29 543 aa6.32□□□□□ -1.4
KDM3A-208ENST00000463013 ZNF428Q96B54 188 aa6.32□□□□□ -1.4
KDM3A-208ENST00000463013 ACSF2Q96CM8 615 aaPredicted RBP6.32□□□□□ -1.4
KDM3A-208ENST00000463013 TMEM87BQ96K49 555 aa6.32□□□□□ -1.4
KDM3A-208ENST00000463013 PCDHGB7Q9Y5F8 929 aa6.32□□□□□ -1.4
KDM3A-208ENST00000463013 NFIBO00712 420 aa6.31□□□□□ -1.4
KDM3A-208ENST00000463013 GRIN3BO60391 1043 aa6.31□□□□□ -1.4
KDM3A-208ENST00000463013 AFMP43652 599 aa6.31□□□□□ -1.4
KDM3A-208ENST00000463013 CRKP46108 304 aa6.31□□□□□ -1.4
KDM3A-208ENST00000463013 HDLBPQ00341 1268 aaKnown RBP6.31□□□□□ -1.4
KDM3A-208ENST00000463013 TMEM201Q5SNT2 666 aa6.31□□□□□ -1.4
KDM3A-208ENST00000463013 SLC6A19Q695T7 634 aa6.31□□□□□ -1.4
KDM3A-208ENST00000463013 LCNL1Q6ZST4 164 aa6.31□□□□□ -1.4
KDM3A-208ENST00000463013 SYDE1Q6ZW31 735 aaPredicted RBP6.31□□□□□ -1.4
KDM3A-208ENST00000463013 MCATQ8IVS2 390 aaKnown RBP6.31□□□□□ -1.4
KDM3A-208ENST00000463013 SPON2Q9BUD6 331 aa6.31□□□□□ -1.4
KDM3A-208ENST00000463013 NT5C1AQ9BXI3 368 aa6.31□□□□□ -1.4
KDM3A-208ENST00000463013 UBP1Q9NZI7 540 aa6.31□□□□□ -1.4
KDM3A-208ENST00000463013 DDX41Q9UJV9 622 aaKnown RBP6.31□□□□□ -1.4
KDM3A-208ENST00000463013 SLITRK5O94991 958 aa6.3□□□□□ -1.4
KDM3A-208ENST00000463013 HTR3BO95264 441 aa6.3□□□□□ -1.4
KDM3A-208ENST00000463013 EOMESO95936 686 aa6.3□□□□□ -1.4
KDM3A-208ENST00000463013 BUD31P41223 144 aaPredicted RBP6.3□□□□□ -1.4
KDM3A-208ENST00000463013 RACK1P63244 317 aaKnown RBP6.3□□□□□ -1.4
KDM3A-208ENST00000463013 APOBRQ0VD83 1088 aa6.3□□□□□ -1.4
KDM3A-208ENST00000463013 FAM214BQ7L5A3 538 aa6.3□□□□□ -1.4
KDM3A-208ENST00000463013 C1QL4Q86Z23 238 aa6.3□□□□□ -1.4
KDM3A-208ENST00000463013 EAF1Q96JC9 268 aaPredicted RBP6.3□□□□□ -1.4
KDM3A-208ENST00000463013 HEXIM2Q96MH2 286 aaKnown RBP6.3□□□□□ -1.4
KDM3A-208ENST00000463013 MIPEPQ99797 713 aa6.3□□□□□ -1.4
KDM3A-208ENST00000463013 DPH2Q9BQC3 489 aaPredicted RBP6.3□□□□□ -1.4
KDM3A-208ENST00000463013 BRMS1Q9HCU9 246 aa6.3□□□□□ -1.4
KDM3A-208ENST00000463013 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.3□□□□□ -1.4
KDM3A-208ENST00000463013 LMCD1Q9NZU5 365 aa6.3□□□□□ -1.4
KDM3A-208ENST00000463013 REV1Q9UBZ9 1251 aa6.3□□□□□ -1.4
KDM3A-208ENST00000463013 GTF2IRD1Q9UHL9 959 aa6.3□□□□□ -1.4
KDM3A-208ENST00000463013 SNX11Q9Y5W9 270 aa6.3□□□□□ -1.4
KDM3A-208ENST00000463013 ZNF503-AS2A6NEH8 195 aa6.29□□□□□ -1.4
KDM3A-208ENST00000463013 IGF2BP3O00425 579 aaKnown RBP eCLIP6.29□□□□□ -1.4
KDM3A-208ENST00000463013 RBM25P49756 843 aaKnown RBP6.29□□□□□ -1.4
KDM3A-208ENST00000463013 SEZ6Q53EL9 994 aa6.29□□□□□ -1.4
KDM3A-208ENST00000463013 LETMD1Q6P1Q0 360 aa6.29□□□□□ -1.4
KDM3A-208ENST00000463013 AMIGO3Q86WK7 504 aa6.29□□□□□ -1.4
KDM3A-208ENST00000463013 NT5DC4Q86YG4 428 aa6.29□□□□□ -1.4
KDM3A-208ENST00000463013 ZNF654Q8IZM8 581 aa6.29□□□□□ -1.4
KDM3A-208ENST00000463013 FAM181AQ8N9Y4 354 aa6.29□□□□□ -1.4
KDM3A-208ENST00000463013 XAGE3Q8WTP9 111 aa6.29□□□□□ -1.4
KDM3A-208ENST00000463013 U3KQE9 123 aa6.29□□□□□ -1.4
KDM3A-208ENST00000463013 ATE1O95260 518 aa6.28□□□□□ -1.4
KDM3A-208ENST00000463013 YARSP54577 528 aaKnown RBP6.28□□□□□ -1.4
KDM3A-208ENST00000463013 OXCT1P55809 520 aa6.28□□□□□ -1.4
KDM3A-208ENST00000463013 C9orf131Q5VYM1 1079 aa6.28□□□□□ -1.4
KDM3A-208ENST00000463013 MPZL3Q6UWV2 235 aa6.28□□□□□ -1.4
KDM3A-208ENST00000463013 SLITRK4Q8IW52 837 aa6.28□□□□□ -1.4
KDM3A-208ENST00000463013 FAM13CQ8NE31 585 aa6.28□□□□□ -1.4
KDM3A-208ENST00000463013 ASB11Q8WXH4 323 aa6.28□□□□□ -1.4
KDM3A-208ENST00000463013 NKD1Q969G9 470 aa6.28□□□□□ -1.4
KDM3A-208ENST00000463013 EHMT1Q9H9B1 1298 aa6.28□□□□□ -1.4
KDM3A-208ENST00000463013 PRDM5Q9NQX1 630 aaPredicted RBP6.28□□□□□ -1.4
KDM3A-208ENST00000463013 MAPK8IP1Q9UQF2 711 aa6.28□□□□□ -1.4
KDM3A-208ENST00000463013 PCDHB14Q9Y5E9 798 aa6.28□□□□□ -1.4
KDM3A-208ENST00000463013 UPK3BL1B0FP48 263 aa6.27□□□□□ -1.41
KDM3A-208ENST00000463013 UPK3BL2E5RIL1 263 aa6.27□□□□□ -1.41
KDM3A-208ENST00000463013 CEACAM5P06731 702 aa6.27□□□□□ -1.41
KDM3A-208ENST00000463013 MLECQ14165 292 aa6.27□□□□□ -1.41
KDM3A-208ENST00000463013 ZNF746Q6NUN9 644 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms