RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 SWAP70Q9UH65 585 aa17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 CNPY2Q9Y2B0 182 aa17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 KIF3AQ9Y496 699 aa17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 ATRNL1Q5VV63 1379 aa17.47■□□□□ 0.39
RPRD1B-203ENST00000462548 PLIN4Q96Q06 1357 aa17.47■□□□□ 0.39
RPRD1B-203ENST00000462548 DNM1Q05193 864 aaKnown RBP17.47■□□□□ 0.39
RPRD1B-203ENST00000462548 FUT2Q10981 343 aa17.47■□□□□ 0.39
RPRD1B-203ENST00000462548 NBPF9Q3BBW0 867 aa17.47■□□□□ 0.39
RPRD1B-203ENST00000462548 CLEC10AQ8IUN9 316 aa17.47■□□□□ 0.39
RPRD1B-203ENST00000462548 CRACR2BQ8N4Y2 399 aaPredicted RBP17.47■□□□□ 0.39
RPRD1B-203ENST00000462548 PNMA1Q8ND90 353 aa17.47■□□□□ 0.39
RPRD1B-203ENST00000462548 CEP95Q96GE4 821 aa17.47■□□□□ 0.39
RPRD1B-203ENST00000462548 KAT14Q9H8E8 782 aa17.47■□□□□ 0.39
RPRD1B-203ENST00000462548 CNTNAP1P78357 1384 aa17.47■□□□□ 0.39
RPRD1B-203ENST00000462548 NOVP48745 357 aa17.47■□□□□ 0.39
RPRD1B-203ENST00000462548 GMPSP49915 693 aaPredicted RBP17.47■□□□□ 0.39
RPRD1B-203ENST00000462548 MYOZ2Q9NPC6 264 aa17.47■□□□□ 0.39
RPRD1B-203ENST00000462548 PI4KBQ9UBF8 816 aa17.47■□□□□ 0.39
RPRD1B-203ENST00000462548 STX8Q9UNK0 236 aa17.47■□□□□ 0.39
RPRD1B-203ENST00000462548 GJA3Q9Y6H8 435 aa17.47■□□□□ 0.39
RPRD1B-203ENST00000462548 IGKV6D-41A0A0C4DH26 115 aa17.46■□□□□ 0.39
RPRD1B-203ENST00000462548 WNT10BO00744 389 aa17.46■□□□□ 0.39
RPRD1B-203ENST00000462548 TRAK2O60296 914 aa17.46■□□□□ 0.39
RPRD1B-203ENST00000462548 PRPF40AO75400 957 aaKnown RBP17.46■□□□□ 0.39
RPRD1B-203ENST00000462548 EIF6P56537 245 aaKnown RBP17.46■□□□□ 0.39
RPRD1B-203ENST00000462548 ZNF280AP59817 542 aaPredicted RBP17.46■□□□□ 0.39
RPRD1B-203ENST00000462548 SSRP1Q08945 709 aaKnown RBP17.46■□□□□ 0.39
RPRD1B-203ENST00000462548 SHROOM1Q2M3G4 852 aaPredicted RBP17.46■□□□□ 0.39
RPRD1B-203ENST00000462548 CCDC178Q5BJE1 867 aa17.46■□□□□ 0.39
RPRD1B-203ENST00000462548 RASGRP2Q7LDG7 609 aa17.46■□□□□ 0.39
RPRD1B-203ENST00000462548 C8orf76Q96K31 380 aa17.46■□□□□ 0.39
RPRD1B-203ENST00000462548 ALG1Q9BT22 464 aa17.46■□□□□ 0.39
RPRD1B-203ENST00000462548 STK36Q9NRP7 1315 aa17.46■□□□□ 0.39
RPRD1B-203ENST00000462548 GREB1LQ9C091 1923 aaPredicted RBP17.46■□□□□ 0.39
RPRD1B-203ENST00000462548 CCDC196A0A1B0GTZ2 297 aa17.46■□□□□ 0.38
RPRD1B-203ENST00000462548 CALM1P0DP23 149 aa17.46■□□□□ 0.38
RPRD1B-203ENST00000462548 CALM2P0DP24 149 aa17.46■□□□□ 0.38
RPRD1B-203ENST00000462548 CALM3P0DP25 149 aa17.46■□□□□ 0.38
RPRD1B-203ENST00000462548 COL2A1P02458 1487 aaPredicted RBP17.45■□□□□ 0.38
RPRD1B-203ENST00000462548 SBF1O95248 1867 aa17.45■□□□□ 0.38
RPRD1B-203ENST00000462548 GOLGA6L22H0YM25 854 aa17.45■□□□□ 0.38
RPRD1B-203ENST00000462548 TMTC3Q6ZXV5 915 aa17.45■□□□□ 0.38
RPRD1B-203ENST00000462548 CDAN1Q8IWY9 1227 aa17.45■□□□□ 0.38
RPRD1B-203ENST00000462548 FBXO18Q8NFZ0 1043 aa17.45■□□□□ 0.38
RPRD1B-203ENST00000462548 VEZTQ9HBM0 779 aa17.45■□□□□ 0.38
RPRD1B-203ENST00000462548 TMOD2Q9NZR1 351 aa17.45■□□□□ 0.38
RPRD1B-203ENST00000462548 TAOK2Q9UL54 1235 aa17.45■□□□□ 0.38
RPRD1B-203ENST00000462548 SRCAPQ6ZRS2 3230 aa17.45■□□□□ 0.38
RPRD1B-203ENST00000462548 YBX3P16989 372 aaKnown RBP eCLIP17.45■□□□□ 0.388e-7■■□□□ 12.2
RPRD1B-203ENST00000462548 RPS12P25398 132 aaKnown RBP17.45■□□□□ 0.38
RPRD1B-203ENST00000462548 PPP2R5BQ15173 497 aa17.45■□□□□ 0.38
RPRD1B-203ENST00000462548 METTL16Q86W50 562 aaKnown RBP17.45■□□□□ 0.38
RPRD1B-203ENST00000462548 SRBD1Q8N5C6 995 aaKnown RBP17.45■□□□□ 0.38
RPRD1B-203ENST00000462548 DICER1Q9UPY3 1922 aaKnown RBP17.44■□□□□ 0.38
RPRD1B-203ENST00000462548 RBM26Q5T8P6 1007 aaKnown RBP17.44■□□□□ 0.38
RPRD1B-203ENST00000462548 RBM28Q9NW13 759 aaKnown RBP17.44■□□□□ 0.38
RPRD1B-203ENST00000462548 MTMR4Q9NYA4 1195 aa17.44■□□□□ 0.38
RPRD1B-203ENST00000462548 ATP6V1DQ9Y5K8 247 aa17.44■□□□□ 0.38
RPRD1B-203ENST00000462548 hCG_1642624A0A1W2PR95 340 aa17.43■□□□□ 0.38
RPRD1B-203ENST00000462548 FOXP4Q8IVH2 680 aaPredicted RBP17.43■□□□□ 0.38
RPRD1B-203ENST00000462548 MICALL2Q8IY33 904 aa17.43■□□□□ 0.38
RPRD1B-203ENST00000462548 STAG2Q8N3U4 1231 aa17.43■□□□□ 0.38
RPRD1B-203ENST00000462548 CTCFLQ8NI51 663 aaPredicted RBP17.43■□□□□ 0.38
RPRD1B-203ENST00000462548 FAM151AQ8WW52 585 aa17.43■□□□□ 0.38
RPRD1B-203ENST00000462548 CSRNP1Q96S65 589 aa17.43■□□□□ 0.38
RPRD1B-203ENST00000462548 SCAF8Q9UPN6 1271 aaKnown RBP17.43■□□□□ 0.38
RPRD1B-203ENST00000462548 MTMR7Q9Y216 660 aa17.43■□□□□ 0.38
RPRD1B-203ENST00000462548 LMNB1P20700 586 aa17.43■□□□□ 0.38
RPRD1B-203ENST00000462548 RRP1BQ14684 758 aaKnown RBP17.43■□□□□ 0.38
RPRD1B-203ENST00000462548 GRM4Q14833 912 aa17.43■□□□□ 0.38
RPRD1B-203ENST00000462548 TATDN1Q6P1N9 297 aa17.43■□□□□ 0.38
RPRD1B-203ENST00000462548 SAMD7Q7Z3H4 446 aa17.43■□□□□ 0.38
RPRD1B-203ENST00000462548 USP48Q86UV5 1035 aa17.43■□□□□ 0.38
RPRD1B-203ENST00000462548 CNTNAP5Q8WYK1 1306 aa17.43■□□□□ 0.38
RPRD1B-203ENST00000462548 SHISA4Q96DD7 197 aa17.43■□□□□ 0.38
RPRD1B-203ENST00000462548 ASTN2O75129 1339 aaPredicted RBP17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 NCLP19338 710 aaKnown RBP17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 PKN1Q16512 942 aa17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 SLC35G1Q2M3R5 365 aa17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 KRT40Q6A162 431 aa17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 DPF2Q92785 391 aa17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 TMEM39BQ9GZU3 492 aa17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 MAD2L2Q9UI95 211 aa17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 CNOT7Q9UIV1 285 aaKnown RBP17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 MYH6P13533 1939 aa17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 BAZ2BQ9UIF8 2168 aaKnown RBP17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 KIF28PB7ZC32 967 aa17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 FIBPO43427 364 aa17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 TOP1P11387 765 aaKnown RBP17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 JAG1P78504 1218 aa17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 TRIM22Q8IYM9 498 aa17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 RNF26Q9BY78 433 aaPredicted RBP17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 PGAP2Q9UHJ9 254 aa17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 MYH15Q9Y2K3 1946 aa17.42■□□□□ 0.38
RPRD1B-203ENST00000462548 MPHOSPH10O00566 681 aaKnown RBP17.41■□□□□ 0.38
RPRD1B-203ENST00000462548 GADD45BO75293 160 aaPredicted RBP17.41■□□□□ 0.38
RPRD1B-203ENST00000462548 DEXIO95424 95 aa17.41■□□□□ 0.38
RPRD1B-203ENST00000462548 TBC1D10BQ4KMP7 808 aaPredicted RBP17.41■□□□□ 0.38
RPRD1B-203ENST00000462548 FKBP1CQ5VVH2 108 aa17.41■□□□□ 0.38
RPRD1B-203ENST00000462548 MAP3K14Q99558 947 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms