RNA–Protein interactions for RNA: ENST00000461780.1

PPARGC1B-206, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 4

Gene PPARGC1B, Length 566 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-206ENST00000461780 ZAP70P43403 619 aa18.62■□□□□ 0.57
PPARGC1B-206ENST00000461780 G3BP1Q13283 466 aaKnown RBP eCLIP18.62■□□□□ 0.57
PPARGC1B-206ENST00000461780 USP17L2Q6R6M4 530 aa18.62■□□□□ 0.57
PPARGC1B-206ENST00000461780 CATSPERGQ6ZRH7 1159 aa18.62■□□□□ 0.57
PPARGC1B-206ENST00000461780 GTF3C2Q8WUA4 911 aaPredicted RBP18.62■□□□□ 0.57
PPARGC1B-206ENST00000461780 PAGR1Q9BTK6 254 aa18.62■□□□□ 0.57
PPARGC1B-206ENST00000461780 BTBD7Q9P203 1132 aa18.62■□□□□ 0.57
PPARGC1B-206ENST00000461780 SAP30BPQ9UHR5 308 aaKnown RBP18.62■□□□□ 0.57
PPARGC1B-206ENST00000461780 DBNLQ9UJU6 430 aaKnown RBP18.62■□□□□ 0.57
PPARGC1B-206ENST00000461780 MDM2Q00987 491 aaPredicted RBP18.61■□□□□ 0.57
PPARGC1B-206ENST00000461780 ATF7IPQ6VMQ6 1270 aa18.61■□□□□ 0.57
PPARGC1B-206ENST00000461780 NPLOC4Q8TAT6 608 aa18.61■□□□□ 0.57
PPARGC1B-206ENST00000461780 ACER1Q8TDN7 264 aa18.61■□□□□ 0.57
PPARGC1B-206ENST00000461780 COL25A1Q9BXS0 654 aaPredicted RBP18.61■□□□□ 0.57
PPARGC1B-206ENST00000461780 EHD4Q9H223 541 aa18.61■□□□□ 0.57
PPARGC1B-206ENST00000461780 TLR7Q9NYK1 1049 aaKnown RBP18.61■□□□□ 0.57
PPARGC1B-206ENST00000461780 BCAR3O75815 825 aa18.6■□□□□ 0.57
PPARGC1B-206ENST00000461780 PTPREP23469 700 aa18.6■□□□□ 0.57
PPARGC1B-206ENST00000461780 PDE3AQ14432 1141 aa18.6■□□□□ 0.57
PPARGC1B-206ENST00000461780 GRB14Q14449 540 aa18.6■□□□□ 0.57
PPARGC1B-206ENST00000461780 EDC3Q96F86 508 aaKnown RBP18.6■□□□□ 0.57
PPARGC1B-206ENST00000461780 KIAA1683Q9H0B3 1180 aa18.6■□□□□ 0.57
PPARGC1B-206ENST00000461780 COL11A1P12107 1806 aaPredicted RBP18.6■□□□□ 0.57
PPARGC1B-206ENST00000461780 TTC28Q96AY4 2481 aa18.6■□□□□ 0.57
PPARGC1B-206ENST00000461780 SLC15A5A6NIM6 579 aa18.59■□□□□ 0.57
PPARGC1B-206ENST00000461780 USP17L15C9J2P7 530 aa18.59■□□□□ 0.57
PPARGC1B-206ENST00000461780 USP17L13C9JLJ4 530 aa18.59■□□□□ 0.57
PPARGC1B-206ENST00000461780 USP17L11C9JVI0 530 aa18.59■□□□□ 0.57
PPARGC1B-206ENST00000461780 USP17L18D6R9N7 530 aa18.59■□□□□ 0.57
PPARGC1B-206ENST00000461780 USP17L22D6RA61 530 aa18.59■□□□□ 0.57
PPARGC1B-206ENST00000461780 USP17L17D6RBQ6 530 aa18.59■□□□□ 0.57
PPARGC1B-206ENST00000461780 USP17L19D6RCP7 530 aa18.59■□□□□ 0.57
PPARGC1B-206ENST00000461780 USP17L20D6RJB6 530 aa18.59■□□□□ 0.57
PPARGC1B-206ENST00000461780 VCAM1P19320 739 aa18.59■□□□□ 0.57
PPARGC1B-206ENST00000461780 ATP8B2P98198 1209 aa18.59■□□□□ 0.57
PPARGC1B-206ENST00000461780 USP17L24Q0WX57 530 aa18.59■□□□□ 0.57
PPARGC1B-206ENST00000461780 CRACR2BQ8N4Y2 399 aaPredicted RBP18.59■□□□□ 0.57
PPARGC1B-206ENST00000461780 NOP58Q9Y2X3 529 aaKnown RBP18.59■□□□□ 0.57
PPARGC1B-206ENST00000461780 NDUFB9Q9Y6M9 179 aa18.59■□□□□ 0.57
PPARGC1B-206ENST00000461780 MYH8P13535 1937 aa18.59■□□□□ 0.57
PPARGC1B-206ENST00000461780 SPDYE16A6NNV3 312 aaPredicted RBP18.58■□□□□ 0.56
PPARGC1B-206ENST00000461780 CYBAP13498 195 aa18.58■□□□□ 0.56
PPARGC1B-206ENST00000461780 SHMT1P34896 483 aa18.58■□□□□ 0.56
PPARGC1B-206ENST00000461780 EVX2Q03828 476 aa18.58■□□□□ 0.56
PPARGC1B-206ENST00000461780 TTC39AQ5SRH9 613 aa18.58■□□□□ 0.56
PPARGC1B-206ENST00000461780 EAF2Q96CJ1 260 aaPredicted RBP18.58■□□□□ 0.56
PPARGC1B-206ENST00000461780 NOL10Q9BSC4 688 aaKnown RBP18.58■□□□□ 0.56
PPARGC1B-206ENST00000461780 DDX20Q9UHI6 824 aaKnown RBP18.58■□□□□ 0.56
PPARGC1B-206ENST00000461780 GABPAQ06546 454 aa18.57■□□□□ 0.56
PPARGC1B-206ENST00000461780 CCDC158Q5M9N0 1113 aa18.57■□□□□ 0.56
PPARGC1B-206ENST00000461780 TMEM57Q8N5G2 664 aa18.57■□□□□ 0.56
PPARGC1B-206ENST00000461780 LPAR1Q92633 364 aa18.57■□□□□ 0.56
PPARGC1B-206ENST00000461780 ANTXR1Q9H6X2 564 aa18.57■□□□□ 0.56
PPARGC1B-206ENST00000461780 MUC3AQ02505 3323 aa18.57■□□□□ 0.56
PPARGC1B-206ENST00000461780 PLXNA1Q9UIW2 1896 aa18.56■□□□□ 0.56
PPARGC1B-206ENST00000461780 A0A1W2PRG0 241 aa18.56■□□□□ 0.56
PPARGC1B-206ENST00000461780 CYP7A1P22680 504 aa18.56■□□□□ 0.56
PPARGC1B-206ENST00000461780 CYP2C19P33261 490 aa18.56■□□□□ 0.56
PPARGC1B-206ENST00000461780 PLCD1P51178 756 aa18.56■□□□□ 0.56
PPARGC1B-206ENST00000461780 ZYXQ15942 572 aaKnown RBP18.56■□□□□ 0.56
PPARGC1B-206ENST00000461780 CLUAP1Q96AJ1 413 aa18.56■□□□□ 0.56
PPARGC1B-206ENST00000461780 RIOK1Q9BRS2 568 aaKnown RBP18.56■□□□□ 0.56
PPARGC1B-206ENST00000461780 SENP6Q9GZR1 1112 aaPredicted RBP18.56■□□□□ 0.56
PPARGC1B-206ENST00000461780 SERPINB13Q9UIV8 391 aa18.56■□□□□ 0.56
PPARGC1B-206ENST00000461780 DNM1LO00429 736 aa18.55■□□□□ 0.56
PPARGC1B-206ENST00000461780 HLA-DOAP06340 250 aa18.55■□□□□ 0.56
PPARGC1B-206ENST00000461780 SNX17Q15036 470 aa18.55■□□□□ 0.56
PPARGC1B-206ENST00000461780 KIAA1755Q5JYT7 1200 aa18.55■□□□□ 0.56
PPARGC1B-206ENST00000461780 MIGA1Q8NAN2 632 aa18.55■□□□□ 0.56
PPARGC1B-206ENST00000461780 BAZ2AQ9UIF9 1905 aaKnown RBP18.55■□□□□ 0.56
PPARGC1B-206ENST00000461780 MFSD14CQ5VZR4 134 aa18.54■□□□□ 0.56
PPARGC1B-206ENST00000461780 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.54■□□□□ 0.564e-6■■■■■ 40.8
PPARGC1B-206ENST00000461780 IPO8O15397 1037 aaKnown RBP18.53■□□□□ 0.56
PPARGC1B-206ENST00000461780 MSCO60682 206 aa18.53■□□□□ 0.56
PPARGC1B-206ENST00000461780 USP14P54578 494 aa18.53■□□□□ 0.56
PPARGC1B-206ENST00000461780 RTP1P59025 263 aa18.53■□□□□ 0.56
PPARGC1B-206ENST00000461780 CCNA1P78396 465 aa18.53■□□□□ 0.56
PPARGC1B-206ENST00000461780 CERKLQ49MI3 558 aaPredicted RBP18.53■□□□□ 0.56
PPARGC1B-206ENST00000461780 SIAH1Q8IUQ4 282 aa18.53■□□□□ 0.56
PPARGC1B-206ENST00000461780 MOV10L1Q9BXT6 1211 aaKnown RBP18.53■□□□□ 0.56
PPARGC1B-206ENST00000461780 TRIM34Q9BYJ4 488 aa18.53■□□□□ 0.56
PPARGC1B-206ENST00000461780 CCDC8Q9H0W5 538 aaPredicted RBP18.53■□□□□ 0.56
PPARGC1B-206ENST00000461780 RPAP3Q9H6T3 665 aaPredicted RBP18.53■□□□□ 0.56
PPARGC1B-206ENST00000461780 COBLO75128 1261 aa18.52■□□□□ 0.56
PPARGC1B-206ENST00000461780 SURF6O75683 361 aaKnown RBP18.52■□□□□ 0.56
PPARGC1B-206ENST00000461780 ATN1P54259 1190 aaPredicted RBP18.52■□□□□ 0.56
PPARGC1B-206ENST00000461780 ABCB5Q2M3G0 1257 aa18.52■□□□□ 0.56
PPARGC1B-206ENST00000461780 C9orf50Q5SZB4 431 aa18.52■□□□□ 0.56
PPARGC1B-206ENST00000461780 OLFML2BQ68BL8 750 aa18.52■□□□□ 0.56
PPARGC1B-206ENST00000461780 SLC39A5Q6ZMH5 540 aa18.52■□□□□ 0.56
PPARGC1B-206ENST00000461780 MAGEB6Q8N7X4 407 aa18.52■□□□□ 0.56
PPARGC1B-206ENST00000461780 C1orf115Q9H7X2 142 aa18.52■□□□□ 0.56
PPARGC1B-206ENST00000461780 IDH1O75874 414 aaKnown RBP18.51■□□□□ 0.55
PPARGC1B-206ENST00000461780 GLRX3O76003 335 aaKnown RBP18.51■□□□□ 0.55
PPARGC1B-206ENST00000461780 ATP2B2Q01814 1243 aa18.51■□□□□ 0.55
PPARGC1B-206ENST00000461780 SEPT2Q15019 361 aa18.51■□□□□ 0.55
PPARGC1B-206ENST00000461780 RAB3GAP1Q15042 981 aa18.51■□□□□ 0.55
PPARGC1B-206ENST00000461780 SHHQ15465 462 aa18.51■□□□□ 0.55
PPARGC1B-206ENST00000461780 GJC2Q5T442 439 aaPredicted RBP18.51■□□□□ 0.55
PPARGC1B-206ENST00000461780 CCAR1Q8IX12 1150 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms