RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 HMGCRP04035 888 aa21.35■■□□□ 1.01
COL1A2-202ENST00000461525 ERVK-9P63128 1117 aa21.35■■□□□ 1.01
COL1A2-202ENST00000461525 ERVK-24P63145 666 aa21.35■■□□□ 1.01
COL1A2-202ENST00000461525 EVX2Q03828 476 aa21.35■■□□□ 1.01
COL1A2-202ENST00000461525 USP17L24Q0WX57 530 aa21.35■■□□□ 1.01
COL1A2-202ENST00000461525 SLFNL1Q499Z3 407 aa21.35■■□□□ 1.01
COL1A2-202ENST00000461525 CCAR1Q8IX12 1150 aaKnown RBP21.35■■□□□ 1.01
COL1A2-202ENST00000461525 DEFB118Q96PH6 123 aa21.35■■□□□ 1.01
COL1A2-202ENST00000461525 MYH1P12882 1939 aa21.35■■□□□ 1.01
COL1A2-202ENST00000461525 PRKAB2O43741 272 aa21.34■■□□□ 1.01
COL1A2-202ENST00000461525 FARP2O94887 1054 aaPredicted RBP21.34■■□□□ 1.01
COL1A2-202ENST00000461525 CYP2D6P10635 497 aa21.34■■□□□ 1.01
COL1A2-202ENST00000461525 VCAM1P19320 739 aa21.34■■□□□ 1.01
COL1A2-202ENST00000461525 MAPK4P31152 587 aa21.34■■□□□ 1.01
COL1A2-202ENST00000461525 GUCY1A2P33402 732 aa21.34■■□□□ 1.01
COL1A2-202ENST00000461525 SEPT2Q15019 361 aa21.34■■□□□ 1.01
COL1A2-202ENST00000461525 UBE3CQ15386 1083 aa21.34■■□□□ 1.01
COL1A2-202ENST00000461525 ZSCAN25Q6NSZ9 544 aa21.34■■□□□ 1.01
COL1A2-202ENST00000461525 UBE2Q1Q7Z7E8 422 aa21.34■■□□□ 1.01
COL1A2-202ENST00000461525 SOCS4Q8WXH5 440 aa21.34■■□□□ 1.01
COL1A2-202ENST00000461525 PAK6Q9NQU5 681 aaPredicted RBP21.34■■□□□ 1.01
COL1A2-202ENST00000461525 ATP8A2Q9NTI2 1148 aa21.34■■□□□ 1.01
COL1A2-202ENST00000461525 SWAP70Q9UH65 585 aa21.34■■□□□ 1.01
COL1A2-202ENST00000461525 DDX60LQ5H9U9 1706 aaKnown RBP21.34■■□□□ 1.01
COL1A2-202ENST00000461525 CAPN2P17655 700 aa21.33■■□□□ 1.01
COL1A2-202ENST00000461525 SLC44A5Q8NCS7 719 aa21.33■■□□□ 1.01
COL1A2-202ENST00000461525 DDRGK1Q96HY6 314 aa21.33■■□□□ 1.01
COL1A2-202ENST00000461525 NUDT12Q9BQG2 462 aa21.33■■□□□ 1.01
COL1A2-202ENST00000461525 HTATIP2Q9BUP3 242 aa21.33■■□□□ 1.01
COL1A2-202ENST00000461525 ECHDC1Q9NTX5 307 aa21.33■■□□□ 1.01
COL1A2-202ENST00000461525 TFRCP02786 760 aaKnown RBP21.32■■□□□ 1
COL1A2-202ENST00000461525 CHGBP05060 677 aa21.32■■□□□ 1
COL1A2-202ENST00000461525 CYP2B6P20813 491 aa21.32■■□□□ 1
COL1A2-202ENST00000461525 Q3C1V9 767 aa21.32■■□□□ 1
COL1A2-202ENST00000461525 CATSPERGQ6ZRH7 1159 aa21.32■■□□□ 1
COL1A2-202ENST00000461525 AMOTL1Q8IY63 956 aa21.32■■□□□ 1
COL1A2-202ENST00000461525 DPF3Q92784 378 aa21.32■■□□□ 1
COL1A2-202ENST00000461525 GPATCH3Q96I76 525 aa21.32■■□□□ 1
COL1A2-202ENST00000461525 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.32■■□□□ 1
COL1A2-202ENST00000461525 PORCNQ9H237 461 aa21.32■■□□□ 1
COL1A2-202ENST00000461525 DCTPP1Q9H773 170 aa21.32■■□□□ 1
COL1A2-202ENST00000461525 CWC22Q9HCG8 908 aaKnown RBP21.32■■□□□ 1
COL1A2-202ENST00000461525 RABGAP1Q9Y3P9 1069 aa21.32■■□□□ 1
COL1A2-202ENST00000461525 NAV1Q8NEY1 1877 aa21.31■■□□□ 1
COL1A2-202ENST00000461525 H0YGN5 161 aa21.31■■□□□ 1
COL1A2-202ENST00000461525 HABP4Q5JVS0 413 aaKnown RBP21.31■■□□□ 1
COL1A2-202ENST00000461525 POTEEQ6S8J3 1075 aa21.31■■□□□ 1
COL1A2-202ENST00000461525 TMEM179Q6ZVK1 233 aa21.31■■□□□ 1
COL1A2-202ENST00000461525 DYNLL2Q96FJ2 89 aa21.31■■□□□ 1
COL1A2-202ENST00000461525 RPAP3Q9H6T3 665 aaPredicted RBP21.31■■□□□ 1
COL1A2-202ENST00000461525 CCNA1P78396 465 aa21.3■■□□□ 1
COL1A2-202ENST00000461525 GPR142Q7Z601 462 aa21.3■■□□□ 1
COL1A2-202ENST00000461525 PLEKHH3Q7Z736 793 aa21.3■■□□□ 1
COL1A2-202ENST00000461525 TRIB2Q92519 343 aa21.3■■□□□ 1
COL1A2-202ENST00000461525 HMX1Q9NP08 348 aaPredicted RBP21.3■■□□□ 1
COL1A2-202ENST00000461525 SLC4A4Q9Y6R1 1079 aa21.3■■□□□ 1
COL1A2-202ENST00000461525 XRCC5P13010 732 aaKnown RBP21.29■■□□□ 1
COL1A2-202ENST00000461525 TRIM32Q13049 653 aa21.29■■□□□ 1
COL1A2-202ENST00000461525 C12orf60Q5U649 245 aa21.29■■□□□ 1
COL1A2-202ENST00000461525 CRISPLD2Q9H0B8 497 aa21.29■■□□□ 1
COL1A2-202ENST00000461525 RPTORQ8N122 1335 aa21.29■■□□□ 1
COL1A2-202ENST00000461525 CYP2D7A0A087X1C5 515 aa21.28■■□□□ 1
COL1A2-202ENST00000461525 A0A1W2PRG0 241 aa21.28■■□□□ 1
COL1A2-202ENST00000461525 USP17L12C9JPN9 530 aa21.28■■□□□ 1
COL1A2-202ENST00000461525 USP17L21D6R901 530 aa21.28■■□□□ 1
COL1A2-202ENST00000461525 CNMDO75829 334 aa21.28■■□□□ 1
COL1A2-202ENST00000461525 ZKSCAN1P17029 563 aaPredicted RBP21.28■■□□□ 1
COL1A2-202ENST00000461525 RGS2P41220 211 aa21.28■■□□□ 1
COL1A2-202ENST00000461525 LBX2Q6XYB7 198 aa21.28■■□□□ 1
COL1A2-202ENST00000461525 TRMT44Q8IYL2 757 aaKnown RBP21.28■■□□□ 1
COL1A2-202ENST00000461525 PUS7LQ9H0K6 701 aaKnown RBP21.28■■□□□ 1
COL1A2-202ENST00000461525 SPDYE16A6NNV3 312 aaPredicted RBP21.27■■□□□ 1
COL1A2-202ENST00000461525 GLRX3O76003 335 aaKnown RBP21.27■■□□□ 1
COL1A2-202ENST00000461525 AKR1B1P15121 316 aa21.27■■□□□ 1
COL1A2-202ENST00000461525 CDK8P49336 464 aa21.27■■□□□ 1
COL1A2-202ENST00000461525 ICA1Q05084 483 aa21.27■■□□□ 1
COL1A2-202ENST00000461525 MORN1Q5T089 497 aa21.27■■□□□ 1
COL1A2-202ENST00000461525 WDR78Q5VTH9 848 aa21.27■■□□□ 1
COL1A2-202ENST00000461525 TSHZ3Q63HK5 1081 aa21.27■■□□□ 1
COL1A2-202ENST00000461525 KBTBD3Q8NAB2 608 aa21.27■■□□□ 1
COL1A2-202ENST00000461525 USP6NLQ92738 828 aa21.27■■□□□ 1
COL1A2-202ENST00000461525 CCDC17Q96LX7 622 aa21.27■■□□□ 1
COL1A2-202ENST00000461525 APBA2Q99767 749 aa21.27■■□□□ 1
COL1A2-202ENST00000461525 ARHGEF10LQ9HCE6 1279 aa21.27■■□□□ 1
COL1A2-202ENST00000461525 PRKAR2AP13861 404 aaKnown RBP21.26■□□□□ 0.99
COL1A2-202ENST00000461525 C16orf86Q6ZW13 317 aa21.26■□□□□ 0.99
COL1A2-202ENST00000461525 TANGO6Q9C0B7 1094 aa21.26■□□□□ 0.99
COL1A2-202ENST00000461525 SH2D4AQ9H788 454 aa21.26■□□□□ 0.99
COL1A2-202ENST00000461525 BTBD7Q9P203 1132 aa21.26■□□□□ 0.99
COL1A2-202ENST00000461525 DOCK3Q8IZD9 2030 aa21.26■□□□□ 0.99
COL1A2-202ENST00000461525 SMIM22K7EJ46 135 aa21.25■□□□□ 0.99
COL1A2-202ENST00000461525 CEP290O15078 2479 aa21.25■□□□□ 0.99
COL1A2-202ENST00000461525 MAP3K21Q5TCX8 1036 aa21.25■□□□□ 0.99
COL1A2-202ENST00000461525 CLEC10AQ8IUN9 316 aa21.25■□□□□ 0.99
COL1A2-202ENST00000461525 LPAR1Q92633 364 aa21.25■□□□□ 0.99
COL1A2-202ENST00000461525 ARPP21Q9UBL0 812 aaPredicted RBP21.25■□□□□ 0.99
COL1A2-202ENST00000461525 COLQQ9Y215 455 aaPredicted RBP21.25■□□□□ 0.99
COL1A2-202ENST00000461525 PCDHB15Q9Y5E8 787 aa21.25■□□□□ 0.99
COL1A2-202ENST00000461525 NR2E3Q9Y5X4 410 aa21.25■□□□□ 0.99
COL1A2-202ENST00000461525 MAP2K5Q13163 448 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms