RNA–Protein interactions for RNA: ENST00000461283.5

RBM39-221, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 2,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-221ENST00000461283 ZKSCAN5Q9Y2L8 839 aa3.8□□□□□ -1.8
RBM39-221ENST00000461283 PCDHB5Q9Y5E4 795 aa3.8□□□□□ -1.8
RBM39-221ENST00000461283 MAPK8IP3Q9UPT6 1336 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 USP47Q96K76 1375 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 IBTKQ9P2D0 1353 aaPredicted RBP3.79□□□□□ -1.8
RBM39-221ENST00000461283 MAFGO15525 162 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 KCNQ2O43526 872 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 F13A1P00488 732 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 TFE3P19532 575 aaPredicted RBP3.79□□□□□ -1.8
RBM39-221ENST00000461283 CDC27P30260 824 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 VPS72Q15906 364 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 PEAR1Q5VY43 1037 aaPredicted RBP3.79□□□□□ -1.8
RBM39-221ENST00000461283 CNNM4Q6P4Q7 775 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 TPH2Q8IWU9 490 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 GPATCH11Q8N954 259 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 MYRIPQ8NFW9 859 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 TNPO1Q92973 898 aaKnown RBP3.79□□□□□ -1.8
RBM39-221ENST00000461283 CLUHP3Q96NS8 147 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 YIPF4Q9BSR8 244 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 TYW1Q9NV66 732 aaKnown RBP3.79□□□□□ -1.8
RBM39-221ENST00000461283 TAGLN3Q9UI15 199 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 C1orf167Q5SNV9 1468 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 MAP3K5Q99683 1374 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 ABCC5O15440 1437 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 GREM1O60565 184 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 NR3C2P08235 984 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 GRNP28799 593 aaKnown RBP3.79□□□□□ -1.8
RBM39-221ENST00000461283 IDH3AP50213 366 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 EIF6P56537 245 aaKnown RBP3.79□□□□□ -1.8
RBM39-221ENST00000461283 SKOR1P84550 965 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 OS9Q13438 667 aaPredicted RBP3.79□□□□□ -1.8
RBM39-221ENST00000461283 IDI1Q13907 227 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 GRIN2CQ14957 1233 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 PPP1R26Q5T8A7 1209 aaPredicted RBP3.79□□□□□ -1.8
RBM39-221ENST00000461283 RNF180Q86T96 592 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 UNC5CLQ8IV45 518 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 CNPY4Q8N129 248 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 KDF1Q8NAX2 398 aaPredicted RBP3.79□□□□□ -1.8
RBM39-221ENST00000461283 PARD3BQ8TEW8 1205 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 CHAC2Q8WUX2 184 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 LEO1Q8WVC0 666 aaPredicted RBP3.79□□□□□ -1.8
RBM39-221ENST00000461283 NKD1Q969G9 470 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 SNX27Q96L92 541 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 AGBL1Q96MI9 1066 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 NOC4LQ9BVI4 516 aaKnown RBP3.79□□□□□ -1.8
RBM39-221ENST00000461283 TARS2Q9BW92 718 aaKnown RBP3.79□□□□□ -1.8
RBM39-221ENST00000461283 PRR14Q9BWN1 585 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 CCDC113Q9H0I3 377 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 ZMYM5Q9UJ78 669 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 FAM50BQ9Y247 325 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 CHMP3Q9Y3E7 222 aa3.79□□□□□ -1.8
RBM39-221ENST00000461283 RPGRIP1LQ68CZ1 1315 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 COL14A1Q05707 1796 aaKnown RBP3.78□□□□□ -1.8
RBM39-221ENST00000461283 ANKRD30BQ9BXX2 1392 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 KNDC1Q76NI1 1749 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 NRDCO43847 1150 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 PGRP06401 933 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 MCM5P33992 734 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 PHKA2P46019 1235 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 CLCQ05315 142 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 RASGRF1Q13972 1273 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 SKOR2Q2VWA4 1001 aaPredicted RBP3.78□□□□□ -1.8
RBM39-221ENST00000461283 THSD4Q6ZMP0 1018 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 NLRP13Q86W25 1043 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 CHPFQ8IZ52 775 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 SNX29Q8TEQ0 813 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 HHIPQ96QV1 700 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 RSRP1Q9BUV0 290 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 NT5C1AQ9BXI3 368 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 OXCT2Q9BYC2 517 aaPredicted RBP3.78□□□□□ -1.8
RBM39-221ENST00000461283 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.78□□□□□ -1.8
RBM39-221ENST00000461283 EHD4Q9H223 541 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 ZNF395Q9H8N7 513 aaPredicted RBP3.78□□□□□ -1.8
RBM39-221ENST00000461283 UPF2Q9HAU5 1272 aaKnown RBP3.78□□□□□ -1.8
RBM39-221ENST00000461283 BRMS1Q9HCU9 246 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 RTCBQ9Y3I0 505 aaKnown RBP3.78□□□□□ -1.8
RBM39-221ENST00000461283 KCNMB2Q9Y691 235 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 GLI3P10071 1580 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 USP32Q8NFA0 1604 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 SBNO1A3KN83 1393 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 ARHGEF10O15013 1369 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 TNS1Q9HBL0 1735 aaKnown RBP3.78□□□□□ -1.8
RBM39-221ENST00000461283 BRWD3Q6RI45 1802 aa3.78□□□□□ -1.8
RBM39-221ENST00000461283 VSTM5A8MXK1 200 aa3.78□□□□□ -1.81
RBM39-221ENST00000461283 MEN1O00255 615 aa3.78□□□□□ -1.81
RBM39-221ENST00000461283 NPHP1O15259 732 aa3.78□□□□□ -1.81
RBM39-221ENST00000461283 HSP90AB1P08238 724 aaKnown RBP3.78□□□□□ -1.81
RBM39-221ENST00000461283 GSTT1P30711 240 aa3.78□□□□□ -1.81
RBM39-221ENST00000461283 KCNJ4P48050 445 aa3.78□□□□□ -1.81
RBM39-221ENST00000461283 LIG3P49916 1009 aa3.78□□□□□ -1.81
RBM39-221ENST00000461283 PABPC4Q13310 644 aaKnown RBP eCLIP3.78□□□□□ -1.817e-8■■■■□ 22.3
RBM39-221ENST00000461283 R3HDM1Q15032 1099 aaKnown RBP3.78□□□□□ -1.81
RBM39-221ENST00000461283 RAB3GAP1Q15042 981 aa3.78□□□□□ -1.81
RBM39-221ENST00000461283 ZYXQ15942 572 aaKnown RBP3.78□□□□□ -1.81
RBM39-221ENST00000461283 TM4SF20Q53R12 229 aa3.78□□□□□ -1.81
RBM39-221ENST00000461283 PLA2G2CQ5R387 149 aa3.78□□□□□ -1.81
RBM39-221ENST00000461283 DUSP27Q5VZP5 1158 aa3.78□□□□□ -1.81
RBM39-221ENST00000461283 MPRIPQ6WCQ1 1025 aa3.78□□□□□ -1.81
RBM39-221ENST00000461283 DEFB132Q7Z7B7 95 aa3.78□□□□□ -1.81
RBM39-221ENST00000461283 THAP3Q8WTV1 239 aaPredicted RBP3.78□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms