RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 TMEM179Q6ZVK1 233 aa26.93■■□□□ 1.9
TRAF4-207ENST00000461195 PLEKHM2Q8IWE5 1019 aa26.93■■□□□ 1.9
TRAF4-207ENST00000461195 CCDC17Q96LX7 622 aa26.93■■□□□ 1.9
TRAF4-207ENST00000461195 ASCC2Q9H1I8 757 aaPredicted RBP26.93■■□□□ 1.9
TRAF4-207ENST00000461195 EMILIN3Q9NT22 766 aa26.93■■□□□ 1.9
TRAF4-207ENST00000461195 MGAMO43451 1857 aa26.92■■□□□ 1.9
TRAF4-207ENST00000461195 HOXA7P31268 230 aaPredicted RBP26.92■■□□□ 1.9
TRAF4-207ENST00000461195 TDO2P48775 406 aa26.92■■□□□ 1.9
TRAF4-207ENST00000461195 USP14P54578 494 aa26.92■■□□□ 1.9
TRAF4-207ENST00000461195 TICAM2Q86XR7 235 aa26.92■■□□□ 1.9
TRAF4-207ENST00000461195 KIAA1683Q9H0B3 1180 aa26.92■■□□□ 1.9
TRAF4-207ENST00000461195 OSBPL3Q9H4L5 887 aa26.92■■□□□ 1.9
TRAF4-207ENST00000461195 EPB41L4AQ9HCS5 686 aaPredicted RBP26.92■■□□□ 1.9
TRAF4-207ENST00000461195 ECM2O94769 699 aaPredicted RBP26.91■■□□□ 1.9
TRAF4-207ENST00000461195 FMNL1O95466 1100 aaPredicted RBP26.91■■□□□ 1.9
TRAF4-207ENST00000461195 CTGFP29279 349 aa26.91■■□□□ 1.9
TRAF4-207ENST00000461195 GCLCP48506 637 aaPredicted RBP26.91■■□□□ 1.9
TRAF4-207ENST00000461195 IRX3P78415 501 aaPredicted RBP26.91■■□□□ 1.9
TRAF4-207ENST00000461195 ZYXQ15942 572 aaKnown RBP26.91■■□□□ 1.9
TRAF4-207ENST00000461195 ACER1Q8TDN7 264 aa26.91■■□□□ 1.9
TRAF4-207ENST00000461195 TRIM47Q96LD4 638 aa26.91■■□□□ 1.9
TRAF4-207ENST00000461195 C12orf42Q96LP6 360 aa26.91■■□□□ 1.9
TRAF4-207ENST00000461195 NACAP1Q9BZK3 213 aa26.91■■□□□ 1.9
TRAF4-207ENST00000461195 MINDY4BA8MYZ0 360 aa26.9■■□□□ 1.9
TRAF4-207ENST00000461195 TRIM6-TRIM34B2RNG4 842 aa26.9■■□□□ 1.9
TRAF4-207ENST00000461195 AKR1B1P15121 316 aa26.9■■□□□ 1.9
TRAF4-207ENST00000461195 PRMT2P55345 433 aa26.9■■□□□ 1.9
TRAF4-207ENST00000461195 IFNL3Q8IZI9 196 aa26.9■■□□□ 1.9
TRAF4-207ENST00000461195 ANKRD13CQ8N6S4 541 aa26.9■■□□□ 1.9
TRAF4-207ENST00000461195 HOXD10P28358 340 aa26.89■■□□□ 1.9
TRAF4-207ENST00000461195 FCGRTP55899 365 aa26.89■■□□□ 1.9
TRAF4-207ENST00000461195 PRPF38BQ5VTL8 546 aaKnown RBP26.89■■□□□ 1.9
TRAF4-207ENST00000461195 PTCH2Q9Y6C5 1203 aa26.89■■□□□ 1.9
TRAF4-207ENST00000461195 HTTP42858 3142 aa26.88■■□□□ 1.89
TRAF4-207ENST00000461195 ROBO3Q96MS0 1386 aa26.88■■□□□ 1.89
TRAF4-207ENST00000461195 FAM110CQ1W6H9 321 aa26.88■■□□□ 1.89
TRAF4-207ENST00000461195 RILPL2Q969X0 211 aa26.88■■□□□ 1.89
TRAF4-207ENST00000461195 HELLSQ9NRZ9 838 aa26.88■■□□□ 1.89
TRAF4-207ENST00000461195 CCDC129Q6ZRS4 1044 aa26.87■■□□□ 1.89
TRAF4-207ENST00000461195 P2RX7Q99572 595 aaKnown RBP26.87■■□□□ 1.89
TRAF4-207ENST00000461195 SRRDQ9UH36 339 aa26.87■■□□□ 1.89
TRAF4-207ENST00000461195 NAPBQ9H115 298 aa26.86■■□□□ 1.89
TRAF4-207ENST00000461195 MKNK2Q9HBH9 465 aa26.86■■□□□ 1.89
TRAF4-207ENST00000461195 ARHGEF10LQ9HCE6 1279 aa26.86■■□□□ 1.89
TRAF4-207ENST00000461195 PCDH10Q9P2E7 1040 aa26.86■■□□□ 1.89
TRAF4-207ENST00000461195 A0A1W2PRG0 241 aa26.85■■□□□ 1.89
TRAF4-207ENST00000461195 USP17L15C9J2P7 530 aa26.85■■□□□ 1.89
TRAF4-207ENST00000461195 USP17L13C9JLJ4 530 aa26.85■■□□□ 1.89
TRAF4-207ENST00000461195 USP17L11C9JVI0 530 aa26.85■■□□□ 1.89
TRAF4-207ENST00000461195 USP17L18D6R9N7 530 aa26.85■■□□□ 1.89
TRAF4-207ENST00000461195 USP17L22D6RA61 530 aa26.85■■□□□ 1.89
TRAF4-207ENST00000461195 USP17L17D6RBQ6 530 aa26.85■■□□□ 1.89
TRAF4-207ENST00000461195 USP17L19D6RCP7 530 aa26.85■■□□□ 1.89
TRAF4-207ENST00000461195 USP17L20D6RJB6 530 aa26.85■■□□□ 1.89
TRAF4-207ENST00000461195 VCAM1P19320 739 aa26.85■■□□□ 1.89
TRAF4-207ENST00000461195 HERVK_113P62684 666 aa26.85■■□□□ 1.89
TRAF4-207ENST00000461195 ICA1Q05084 483 aa26.85■■□□□ 1.89
TRAF4-207ENST00000461195 USP17L24Q0WX57 530 aa26.85■■□□□ 1.89
TRAF4-207ENST00000461195 STK11IPQ8N1F8 1099 aa26.85■■□□□ 1.89
TRAF4-207ENST00000461195 SLC9C1Q4G0N8 1177 aa26.84■■□□□ 1.89
TRAF4-207ENST00000461195 MCMDC2Q4G0Z9 681 aa26.84■■□□□ 1.89
TRAF4-207ENST00000461195 GTF3C2Q8WUA4 911 aaPredicted RBP26.84■■□□□ 1.89
TRAF4-207ENST00000461195 ARMC5Q96C12 935 aa26.84■■□□□ 1.89
TRAF4-207ENST00000461195 FAM227BQ96M60 508 aa26.84■■□□□ 1.89
TRAF4-207ENST00000461195 SH2D4AQ9H788 454 aa26.84■■□□□ 1.89
TRAF4-207ENST00000461195 ZNF287Q9HBT7 754 aa26.84■■□□□ 1.89
TRAF4-207ENST00000461195 MYPNQ86TC9 1320 aa26.84■■□□□ 1.89
TRAF4-207ENST00000461195 RASA1P20936 1047 aa26.83■■□□□ 1.89
TRAF4-207ENST00000461195 NBPF11Q86T75 865 aa26.83■■□□□ 1.89
TRAF4-207ENST00000461195 CLEC10AQ8IUN9 316 aa26.83■■□□□ 1.89
TRAF4-207ENST00000461195 KANSL2Q9H9L4 492 aa26.83■■□□□ 1.89
TRAF4-207ENST00000461195 MORF4L1Q9UBU8 362 aa26.83■■□□□ 1.89
TRAF4-207ENST00000461195 A0A0D9SFI3 127 aa26.82■■□□□ 1.88
TRAF4-207ENST00000461195 TNPO2O14787 897 aaKnown RBP26.82■■□□□ 1.88
TRAF4-207ENST00000461195 CATSPERGQ6ZRH7 1159 aa26.82■■□□□ 1.88
TRAF4-207ENST00000461195 SIAH1Q8IUQ4 282 aa26.82■■□□□ 1.88
TRAF4-207ENST00000461195 TMX2Q9Y320 296 aa26.82■■□□□ 1.88
TRAF4-207ENST00000461195 GREB1LQ9C091 1923 aaPredicted RBP26.82■■□□□ 1.88
TRAF4-207ENST00000461195 FOXP2O15409 715 aa26.81■■□□□ 1.88
TRAF4-207ENST00000461195 SLC3A2P08195 630 aaKnown RBP26.81■■□□□ 1.88
TRAF4-207ENST00000461195 PRKCZQ05513 592 aa26.81■■□□□ 1.88
TRAF4-207ENST00000461195 NMIQ13287 307 aaPredicted RBP26.81■■□□□ 1.88
TRAF4-207ENST00000461195 RAET1EQ8TD07 263 aa26.81■■□□□ 1.88
TRAF4-207ENST00000461195 RPAP3Q9H6T3 665 aaPredicted RBP26.81■■□□□ 1.88
TRAF4-207ENST00000461195 EEF2P13639 858 aaKnown RBP26.8■■□□□ 1.88
TRAF4-207ENST00000461195 SDSP20132 328 aa26.8■■□□□ 1.88
TRAF4-207ENST00000461195 PDE4AP27815 886 aa26.8■■□□□ 1.88
TRAF4-207ENST00000461195 PPARAQ07869 468 aa26.8■■□□□ 1.88
TRAF4-207ENST00000461195 ZNF444Q8N0Y2 327 aaPredicted RBP26.8■■□□□ 1.88
TRAF4-207ENST00000461195 GPRC5AQ8NFJ5 357 aa26.8■■□□□ 1.88
TRAF4-207ENST00000461195 COA7Q96BR5 231 aa26.8■■□□□ 1.88
TRAF4-207ENST00000461195 ATP2B2Q01814 1243 aa26.79■■□□□ 1.88
TRAF4-207ENST00000461195 PDE4BQ07343 736 aa26.79■■□□□ 1.88
TRAF4-207ENST00000461195 VPS53Q5VIR6 699 aa26.79■■□□□ 1.88
TRAF4-207ENST00000461195 LPAR1Q92633 364 aa26.79■■□□□ 1.88
TRAF4-207ENST00000461195 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.79■■□□□ 1.88
TRAF4-207ENST00000461195 VCPKMTQ9H867 229 aa26.79■■□□□ 1.88
TRAF4-207ENST00000461195 TXNRD2Q9NNW7 524 aa26.79■■□□□ 1.88
TRAF4-207ENST00000461195 RBPJLQ9UBG7 517 aa26.79■■□□□ 1.88
TRAF4-207ENST00000461195 GABRQQ9UN88 632 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms