RNA–Protein interactions for RNA: ENST00000457839.6

MBD1-210, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-210ENST00000457839 STAG2Q8N3U4 1231 aa18.91■□□□□ 0.62
MBD1-210ENST00000457839 RNF26Q9BY78 433 aaPredicted RBP18.91■□□□□ 0.62
MBD1-210ENST00000457839 YDJCA8MPS7 323 aa18.91■□□□□ 0.62
MBD1-210ENST00000457839 CALM1P0DP23 149 aa18.91■□□□□ 0.62
MBD1-210ENST00000457839 CALM2P0DP24 149 aa18.91■□□□□ 0.62
MBD1-210ENST00000457839 CALM3P0DP25 149 aa18.91■□□□□ 0.62
MBD1-210ENST00000457839 U2AF2P26368 475 aaKnown RBP eCLIP18.91■□□□□ 0.623e-7■■□□□ 12.2
MBD1-210ENST00000457839 MARCKSP29966 332 aaPredicted RBP18.91■□□□□ 0.62
MBD1-210ENST00000457839 KIAA2012Q0VF49 1180 aa18.91■□□□□ 0.62
MBD1-210ENST00000457839 SF3A1Q15459 793 aaKnown RBP18.91■□□□□ 0.62
MBD1-210ENST00000457839 ATL3Q6DD88 541 aa18.91■□□□□ 0.62
MBD1-210ENST00000457839 NUP62CLQ9H1M0 184 aa18.91■□□□□ 0.62
MBD1-210ENST00000457839 MYH1P12882 1939 aa18.9■□□□□ 0.62
MBD1-210ENST00000457839 C10orf71Q711Q0 1435 aa18.9■□□□□ 0.62
MBD1-210ENST00000457839 TCP10Q12799 353 aa18.9■□□□□ 0.62
MBD1-210ENST00000457839 ANO1Q5XXA6 986 aa18.9■□□□□ 0.62
MBD1-210ENST00000457839 DGKHQ86XP1 1220 aa18.9■□□□□ 0.62
MBD1-210ENST00000457839 POLR3EQ9NVU0 708 aa18.9■□□□□ 0.62
MBD1-210ENST00000457839 RBM28Q9NW13 759 aaKnown RBP18.9■□□□□ 0.62
MBD1-210ENST00000457839 SNED1Q8TER0 1413 aa18.9■□□□□ 0.62
MBD1-210ENST00000457839 DDX60LQ5H9U9 1706 aaKnown RBP18.9■□□□□ 0.62
MBD1-210ENST00000457839 PPP2R5BQ15173 497 aa18.9■□□□□ 0.62
MBD1-210ENST00000457839 HHIPL2Q6UWX4 724 aa18.9■□□□□ 0.62
MBD1-210ENST00000457839 CLEC10AQ8IUN9 316 aa18.89■□□□□ 0.61
MBD1-210ENST00000457839 TMEM47Q9BQJ4 181 aa18.89■□□□□ 0.61
MBD1-210ENST00000457839 ZNF277Q9NRM2 450 aaPredicted RBP18.89■□□□□ 0.61
MBD1-210ENST00000457839 PPP1R1BQ9UD71 204 aaPredicted RBP18.89■□□□□ 0.61
MBD1-210ENST00000457839 DLEC1Q9Y238 1755 aa18.89■□□□□ 0.61
MBD1-210ENST00000457839 CNTNAP5Q8WYK1 1306 aa18.89■□□□□ 0.61
MBD1-210ENST00000457839 QSER1Q2KHR3 1735 aa18.89■□□□□ 0.61
MBD1-210ENST00000457839 SPTLC2O15270 562 aa18.89■□□□□ 0.61
MBD1-210ENST00000457839 GOLGA8HP0CJ92 632 aa18.89■□□□□ 0.61
MBD1-210ENST00000457839 NOSTRINQ8IVI9 506 aa18.89■□□□□ 0.61
MBD1-210ENST00000457839 TNMDQ9H2S6 317 aa18.89■□□□□ 0.61
MBD1-210ENST00000457839 CPVLQ9H3G5 476 aa18.89■□□□□ 0.61
MBD1-210ENST00000457839 PRPF3O43395 683 aaKnown RBP18.88■□□□□ 0.61
MBD1-210ENST00000457839 ATP2B1P20020 1258 aa18.88■□□□□ 0.61
MBD1-210ENST00000457839 EIF6P56537 245 aaKnown RBP18.88■□□□□ 0.61
MBD1-210ENST00000457839 CEP95Q96GE4 821 aa18.88■□□□□ 0.61
MBD1-210ENST00000457839 ZNF287Q9HBT7 754 aa18.88■□□□□ 0.61
MBD1-210ENST00000457839 A0A1B0GVL5 298 aa18.88■□□□□ 0.61
MBD1-210ENST00000457839 FAM205CA6NFA0 338 aa18.88■□□□□ 0.61
MBD1-210ENST00000457839 SAFBQ15424 915 aaKnown RBP eCLIP18.88■□□□□ 0.61
MBD1-210ENST00000457839 FSIP1Q8NA03 581 aa18.88■□□□□ 0.61
MBD1-210ENST00000457839 FAM196BA6NMK8 535 aa18.87■□□□□ 0.61
MBD1-210ENST00000457839 RAD17O75943 681 aa18.87■□□□□ 0.61
MBD1-210ENST00000457839 ZDHHC15Q96MV8 337 aa18.87■□□□□ 0.61
MBD1-210ENST00000457839 OSBPL5Q9H0X9 879 aaPredicted RBP18.87■□□□□ 0.61
MBD1-210ENST00000457839 MYH6P13533 1939 aa18.87■□□□□ 0.61
MBD1-210ENST00000457839 LETM1O95202 739 aaPredicted RBP18.86■□□□□ 0.61
MBD1-210ENST00000457839 TOB1P50616 345 aaPredicted RBP18.86■□□□□ 0.61
MBD1-210ENST00000457839 SNW1Q13573 536 aaKnown RBP18.86■□□□□ 0.61
MBD1-210ENST00000457839 FUCA2Q9BTY2 467 aa18.86■□□□□ 0.61
MBD1-210ENST00000457839 YEATS4O95619 227 aa18.86■□□□□ 0.61
MBD1-210ENST00000457839 GABPAQ06546 454 aa18.86■□□□□ 0.61
MBD1-210ENST00000457839 MAP3K11Q16584 847 aa18.86■□□□□ 0.61
MBD1-210ENST00000457839 SLC35G1Q2M3R5 365 aa18.86■□□□□ 0.61
MBD1-210ENST00000457839 NOM1Q5C9Z4 860 aaKnown RBP18.86■□□□□ 0.61
MBD1-210ENST00000457839 EARS2Q5JPH6 523 aaKnown RBP18.86■□□□□ 0.61
MBD1-210ENST00000457839 NEDD1Q8NHV4 660 aa18.86■□□□□ 0.61
MBD1-210ENST00000457839 CLSTN2Q9H4D0 955 aa18.86■□□□□ 0.61
MBD1-210ENST00000457839 TCP11L1Q9NUJ3 509 aa18.86■□□□□ 0.61
MBD1-210ENST00000457839 DDX19AQ9NUU7 478 aaKnown RBP18.86■□□□□ 0.61
MBD1-210ENST00000457839 MAD2L2Q9UI95 211 aa18.86■□□□□ 0.61
MBD1-210ENST00000457839 ADAMTS3O15072 1205 aa18.85■□□□□ 0.61
MBD1-210ENST00000457839 AKR1B1P15121 316 aa18.85■□□□□ 0.61
MBD1-210ENST00000457839 CCDC93Q567U6 631 aa18.85■□□□□ 0.61
MBD1-210ENST00000457839 ADALQ6DHV7 355 aa18.85■□□□□ 0.61
MBD1-210ENST00000457839 KCNG4Q8TDN1 519 aa18.85■□□□□ 0.61
MBD1-210ENST00000457839 SLC16A10Q8TF71 515 aa18.85■□□□□ 0.61
MBD1-210ENST00000457839 ANKS1AQ92625 1134 aa18.85■□□□□ 0.61
MBD1-210ENST00000457839 ERCC4Q92889 916 aaPredicted RBP18.85■□□□□ 0.61
MBD1-210ENST00000457839 MAP3K14Q99558 947 aa18.85■□□□□ 0.61
MBD1-210ENST00000457839 CABP5Q9NP86 173 aa18.85■□□□□ 0.61
MBD1-210ENST00000457839 SERPINB13Q9UIV8 391 aa18.85■□□□□ 0.61
MBD1-210ENST00000457839 KIF5BP33176 963 aa18.85■□□□□ 0.61
MBD1-210ENST00000457839 SLC39A14Q15043 492 aa18.85■□□□□ 0.61
MBD1-210ENST00000457839 CC2D2BQ6DHV5 1058 aa18.85■□□□□ 0.61
MBD1-210ENST00000457839 NDUFA8P51970 172 aa18.84■□□□□ 0.61
MBD1-210ENST00000457839 PTPAQ15257 358 aa18.84■□□□□ 0.61
MBD1-210ENST00000457839 CCDC73Q6ZRK6 1079 aa18.84■□□□□ 0.61
MBD1-210ENST00000457839 KLHL34Q8N239 644 aa18.84■□□□□ 0.61
MBD1-210ENST00000457839 LARGE2Q8N3Y3 721 aa18.84■□□□□ 0.61
MBD1-210ENST00000457839 GPKOWQ92917 476 aaPredicted RBP eCLIP18.84■□□□□ 0.61
MBD1-210ENST00000457839 CLIC6Q96NY7 704 aa18.84■□□□□ 0.61
MBD1-210ENST00000457839 PHF20Q9BVI0 1012 aa18.84■□□□□ 0.61
MBD1-210ENST00000457839 TDRD3Q9H7E2 651 aaKnown RBP18.84■□□□□ 0.61
MBD1-210ENST00000457839 SHROOM1Q2M3G4 852 aaPredicted RBP18.84■□□□□ 0.61
MBD1-210ENST00000457839 AXDND1Q5T1B0 1012 aaPredicted RBP18.84■□□□□ 0.61
MBD1-210ENST00000457839 USP17L2Q6R6M4 530 aa18.84■□□□□ 0.61
MBD1-210ENST00000457839 RGS22Q8NE09 1264 aa18.84■□□□□ 0.61
MBD1-210ENST00000457839 SUPT20HQ8NEM7 779 aa18.84■□□□□ 0.61
MBD1-210ENST00000457839 ENGASEQ8NFI3 743 aa18.84■□□□□ 0.61
MBD1-210ENST00000457839 FOXP1Q9H334 677 aaPredicted RBP18.84■□□□□ 0.61
MBD1-210ENST00000457839 ZBTB12Q9Y330 459 aaPredicted RBP18.84■□□□□ 0.61
MBD1-210ENST00000457839 FOCADQ5VW36 1801 aa18.84■□□□□ 0.61
MBD1-210ENST00000457839 DDTLA6NHG4 134 aaPredicted RBP18.83■□□□□ 0.61
MBD1-210ENST00000457839 CYTH3O43739 400 aa18.83■□□□□ 0.61
MBD1-210ENST00000457839 MRPS27Q92552 414 aaKnown RBP18.83■□□□□ 0.61
MBD1-210ENST00000457839 FAM198AQ9UFP1 575 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms