RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 ADCY3O60266 1144 aa19.27■□□□□ 0.68
SGCE-208ENST00000450385 GLRX3O76003 335 aaKnown RBP19.27■□□□□ 0.68
SGCE-208ENST00000450385 GNAT2P19087 354 aa19.27■□□□□ 0.68
SGCE-208ENST00000450385 FLT3LGP49771 235 aa19.27■□□□□ 0.68
SGCE-208ENST00000450385 HDAC1Q13547 482 aaPredicted RBP19.27■□□□□ 0.68
SGCE-208ENST00000450385 C12orf60Q5U649 245 aa19.27■□□□□ 0.68
SGCE-208ENST00000450385 PRPF38BQ5VTL8 546 aaKnown RBP19.27■□□□□ 0.68
SGCE-208ENST00000450385 LBX2Q6XYB7 198 aa19.27■□□□□ 0.68
SGCE-208ENST00000450385 SH3TC2Q8TF17 1288 aa19.27■□□□□ 0.68
SGCE-208ENST00000450385 P2RX7Q99572 595 aaKnown RBP19.27■□□□□ 0.68
SGCE-208ENST00000450385 FEZ1Q99689 392 aa19.27■□□□□ 0.68
SGCE-208ENST00000450385 GJB1P08034 283 aa19.26■□□□□ 0.67
SGCE-208ENST00000450385 MAPK4P31152 587 aa19.26■□□□□ 0.67
SGCE-208ENST00000450385 APPBP2Q92624 585 aa19.26■□□□□ 0.67
SGCE-208ENST00000450385 SH2D4AQ9H788 454 aa19.26■□□□□ 0.67
SGCE-208ENST00000450385 SLC4A4Q9Y6R1 1079 aa19.26■□□□□ 0.67
SGCE-208ENST00000450385 RNF113AO15541 343 aaKnown RBP19.25■□□□□ 0.67
SGCE-208ENST00000450385 EN2P19622 333 aaPredicted RBP19.25■□□□□ 0.67
SGCE-208ENST00000450385 SBK1Q52WX2 424 aa19.25■□□□□ 0.67
SGCE-208ENST00000450385 CATSPERGQ6ZRH7 1159 aa19.25■□□□□ 0.67
SGCE-208ENST00000450385 TRMT44Q8IYL2 757 aaKnown RBP19.25■□□□□ 0.67
SGCE-208ENST00000450385 STRBPQ96SI9 672 aaKnown RBP19.25■□□□□ 0.67
SGCE-208ENST00000450385 ARPP21Q9UBL0 812 aaPredicted RBP19.25■□□□□ 0.67
SGCE-208ENST00000450385 BIN2Q9UBW5 565 aaPredicted RBP19.25■□□□□ 0.67
SGCE-208ENST00000450385 GABRQQ9UN88 632 aa19.25■□□□□ 0.67
SGCE-208ENST00000450385 RABGAP1Q9Y3P9 1069 aa19.25■□□□□ 0.67
SGCE-208ENST00000450385 USP17L12C9JPN9 530 aa19.24■□□□□ 0.67
SGCE-208ENST00000450385 USP17L21D6R901 530 aa19.24■□□□□ 0.67
SGCE-208ENST00000450385 XRCC5P13010 732 aaKnown RBP19.24■□□□□ 0.67
SGCE-208ENST00000450385 GJA8P48165 433 aa19.24■□□□□ 0.67
SGCE-208ENST00000450385 CCNA1P78396 465 aa19.24■□□□□ 0.67
SGCE-208ENST00000450385 C16orf86Q6ZW13 317 aa19.24■□□□□ 0.67
SGCE-208ENST00000450385 LPAR1Q92633 364 aa19.24■□□□□ 0.67
SGCE-208ENST00000450385 PUS7LQ9H0K6 701 aaKnown RBP19.24■□□□□ 0.67
SGCE-208ENST00000450385 ZNF287Q9HBT7 754 aa19.24■□□□□ 0.67
SGCE-208ENST00000450385 HOXC10Q9NYD6 342 aa19.24■□□□□ 0.67
SGCE-208ENST00000450385 GJD2Q9UKL4 321 aa19.24■□□□□ 0.67
SGCE-208ENST00000450385 GUCY1A2P33402 732 aa19.23■□□□□ 0.67
SGCE-208ENST00000450385 ERVK-9P63128 1117 aa19.23■□□□□ 0.67
SGCE-208ENST00000450385 ERVK-24P63145 666 aa19.23■□□□□ 0.67
SGCE-208ENST00000450385 SOCS4Q8WXH5 440 aa19.23■□□□□ 0.67
SGCE-208ENST00000450385 ARHGEF10LQ9HCE6 1279 aa19.23■□□□□ 0.67
SGCE-208ENST00000450385 RBPJLQ9UBG7 517 aa19.23■□□□□ 0.67
SGCE-208ENST00000450385 MPHOSPH10O00566 681 aaKnown RBP19.22■□□□□ 0.67
SGCE-208ENST00000450385 PRKAB2O43741 272 aa19.22■□□□□ 0.67
SGCE-208ENST00000450385 CCL5P13501 91 aa19.22■□□□□ 0.67
SGCE-208ENST00000450385 CDK8P49336 464 aa19.22■□□□□ 0.67
SGCE-208ENST00000450385 SEPT2Q15019 361 aa19.22■□□□□ 0.67
SGCE-208ENST00000450385 SHROOM1Q2M3G4 852 aaPredicted RBP19.22■□□□□ 0.67
SGCE-208ENST00000450385 CTR9Q6PD62 1173 aa19.22■□□□□ 0.67
SGCE-208ENST00000450385 CCAR1Q8IX12 1150 aaKnown RBP19.22■□□□□ 0.67
SGCE-208ENST00000450385 RNF208Q9H0X6 261 aa19.22■□□□□ 0.67
SGCE-208ENST00000450385 KANSL2Q9H9L4 492 aa19.22■□□□□ 0.67
SGCE-208ENST00000450385 VCAM1P19320 739 aa19.21■□□□□ 0.67
SGCE-208ENST00000450385 MX1P20591 662 aa19.21■□□□□ 0.67
SGCE-208ENST00000450385 MB21D1Q8N884 522 aa19.21■□□□□ 0.67
SGCE-208ENST00000450385 PI4K2BQ8TCG2 481 aa19.21■□□□□ 0.67
SGCE-208ENST00000450385 ACER1Q8TDN7 264 aa19.21■□□□□ 0.67
SGCE-208ENST00000450385 CRBNQ96SW2 442 aa19.21■□□□□ 0.67
SGCE-208ENST00000450385 NUDT12Q9BQG2 462 aa19.21■□□□□ 0.67
SGCE-208ENST00000450385 STAP2Q9UGK3 403 aa19.21■□□□□ 0.67
SGCE-208ENST00000450385 TMX2Q9Y320 296 aa19.21■□□□□ 0.67
SGCE-208ENST00000450385 PATL2C9JE40 543 aaKnown RBP19.2■□□□□ 0.66
SGCE-208ENST00000450385 COG2Q14746 738 aa19.2■□□□□ 0.66
SGCE-208ENST00000450385 MTFR1Q15390 333 aa19.2■□□□□ 0.66
SGCE-208ENST00000450385 OSBP2Q969R2 916 aa19.2■□□□□ 0.66
SGCE-208ENST00000450385 NACAP1Q9BZK3 213 aa19.2■□□□□ 0.66
SGCE-208ENST00000450385 GSG1L2A8MUP6 293 aa19.19■□□□□ 0.66
SGCE-208ENST00000450385 ECM2O94769 699 aaPredicted RBP19.19■□□□□ 0.66
SGCE-208ENST00000450385 SGPL1O95470 568 aa19.19■□□□□ 0.66
SGCE-208ENST00000450385 HMGCRP04035 888 aa19.19■□□□□ 0.66
SGCE-208ENST00000450385 SLFNL1Q499Z3 407 aa19.19■□□□□ 0.66
SGCE-208ENST00000450385 ANKRD45Q5TZF3 282 aa19.19■□□□□ 0.66
SGCE-208ENST00000450385 RWDD1Q9H446 243 aaPredicted RBP19.19■□□□□ 0.66
SGCE-208ENST00000450385 TXNRD2Q9NNW7 524 aa19.19■□□□□ 0.66
SGCE-208ENST00000450385 GPAA1O43292 621 aa19.18■□□□□ 0.66
SGCE-208ENST00000450385 INHAP05111 366 aa19.18■□□□□ 0.66
SGCE-208ENST00000450385 CYP2D6P10635 497 aa19.18■□□□□ 0.66
SGCE-208ENST00000450385 ICA1Q05084 483 aa19.18■□□□□ 0.66
SGCE-208ENST00000450385 ZYXQ15942 572 aaKnown RBP19.18■□□□□ 0.66
SGCE-208ENST00000450385 PLEKHH3Q7Z736 793 aa19.18■□□□□ 0.66
SGCE-208ENST00000450385 DYNLL2Q96FJ2 89 aa19.18■□□□□ 0.66
SGCE-208ENST00000450385 RPAP3Q9H6T3 665 aaPredicted RBP19.18■□□□□ 0.66
SGCE-208ENST00000450385 PAK6Q9NQU5 681 aaPredicted RBP19.18■□□□□ 0.66
SGCE-208ENST00000450385 SALL3Q9BXA9 1300 aa19.18■□□□□ 0.66
SGCE-208ENST00000450385 ROBO3Q96MS0 1386 aa19.18■□□□□ 0.66
SGCE-208ENST00000450385 PLXNB2O15031 1838 aa19.17■□□□□ 0.66
SGCE-208ENST00000450385 A0A1W2PRG0 241 aa19.17■□□□□ 0.66
SGCE-208ENST00000450385 STRNO43815 780 aa19.17■□□□□ 0.66
SGCE-208ENST00000450385 Q3C1V9 767 aa19.17■□□□□ 0.66
SGCE-208ENST00000450385 USP6NLQ92738 828 aa19.17■□□□□ 0.66
SGCE-208ENST00000450385 EVI5LQ96CN4 794 aa19.17■□□□□ 0.66
SGCE-208ENST00000450385 VCPKMTQ9H867 229 aa19.17■□□□□ 0.66
SGCE-208ENST00000450385 MKNK2Q9HBH9 465 aa19.17■□□□□ 0.66
SGCE-208ENST00000450385 SYNPO2Q9UMS6 1093 aa19.17■□□□□ 0.66
SGCE-208ENST00000450385 RPTORQ8N122 1335 aa19.17■□□□□ 0.66
SGCE-208ENST00000450385 WDR46O15213 610 aaKnown RBP19.16■□□□□ 0.66
SGCE-208ENST00000450385 SLC3A2P08195 630 aaKnown RBP19.16■□□□□ 0.66
SGCE-208ENST00000450385 AKR1B1P15121 316 aa19.16■□□□□ 0.66
SGCE-208ENST00000450385 ELNP15502 786 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms