RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 HSP90AB2PQ58FF8 381 aa8.23□□□□□ -1.09
SPEN-202ENST00000438066 FERMT3Q86UX7 667 aa8.23□□□□□ -1.09
SPEN-202ENST00000438066 MICALL1Q8N3F8 863 aa8.23□□□□□ -1.09
SPEN-202ENST00000438066 JDP2Q8WYK2 163 aa8.23□□□□□ -1.09
SPEN-202ENST00000438066 LACRTQ9GZZ8 138 aa8.23□□□□□ -1.09
SPEN-202ENST00000438066 FAN1Q9Y2M0 1017 aa8.23□□□□□ -1.09
SPEN-202ENST00000438066 ADGRB1O14514 1584 aa8.23□□□□□ -1.09
SPEN-202ENST00000438066 SPATA31D1Q6ZQQ2 1576 aa8.23□□□□□ -1.09
SPEN-202ENST00000438066 VIL1P09327 827 aaKnown RBP8.23□□□□□ -1.09
SPEN-202ENST00000438066 CPB1P15086 417 aa8.23□□□□□ -1.09
SPEN-202ENST00000438066 CNGA1P29973 690 aa8.23□□□□□ -1.09
SPEN-202ENST00000438066 EVA1CP58658 441 aa8.23□□□□□ -1.09
SPEN-202ENST00000438066 ZSCAN1Q8NBB4 408 aa8.23□□□□□ -1.09
SPEN-202ENST00000438066 TM9SF2Q99805 663 aa8.23□□□□□ -1.09
SPEN-202ENST00000438066 ATXN7L1Q9ULK2 861 aaPredicted RBP8.23□□□□□ -1.09
SPEN-202ENST00000438066 ADGRF5Q8IZF2 1346 aa8.22□□□□□ -1.09
SPEN-202ENST00000438066 ESRRAP11474 423 aaPredicted RBP8.22□□□□□ -1.09
SPEN-202ENST00000438066 PTPRAP18433 802 aa8.22□□□□□ -1.09
SPEN-202ENST00000438066 ODR4Q5SWX8 454 aa8.22□□□□□ -1.09
SPEN-202ENST00000438066 EEPD1Q7L9B9 569 aa8.22□□□□□ -1.09
SPEN-202ENST00000438066 PDZD3Q86UT5 571 aa8.22□□□□□ -1.09
SPEN-202ENST00000438066 FAM35AQ86V20 835 aa8.22□□□□□ -1.09
SPEN-202ENST00000438066 IER2Q9BTL4 223 aa8.22□□□□□ -1.09
SPEN-202ENST00000438066 ZC3H12CQ9C0D7 883 aaKnown RBP8.22□□□□□ -1.09
SPEN-202ENST00000438066 PLA2G2EQ9NZK7 142 aa8.22□□□□□ -1.09
SPEN-202ENST00000438066 PRR12Q9ULL5 1215 aa8.22□□□□□ -1.09
SPEN-202ENST00000438066 KDM5AP29375 1690 aaKnown RBP8.21□□□□□ -1.09
SPEN-202ENST00000438066 SLC35F4A4IF30 521 aa8.21□□□□□ -1.09
SPEN-202ENST00000438066 UPK3BL1B0FP48 263 aa8.21□□□□□ -1.09
SPEN-202ENST00000438066 UPK3BL2E5RIL1 263 aa8.21□□□□□ -1.09
SPEN-202ENST00000438066 HTR3BO95264 441 aa8.21□□□□□ -1.09
SPEN-202ENST00000438066 FAM153BP0C7A2 387 aa8.21□□□□□ -1.09
SPEN-202ENST00000438066 FGFR3P22607 806 aa8.21□□□□□ -1.09
SPEN-202ENST00000438066 ZYXQ15942 572 aaKnown RBP8.21□□□□□ -1.09
SPEN-202ENST00000438066 PCSK7Q16549 785 aa8.21□□□□□ -1.09
SPEN-202ENST00000438066 SYT9Q86SS6 491 aa8.21□□□□□ -1.09
SPEN-202ENST00000438066 JAMLQ86YT9 394 aa8.21□□□□□ -1.09
SPEN-202ENST00000438066 TRIM22Q8IYM9 498 aa8.21□□□□□ -1.09
SPEN-202ENST00000438066 TMEM40Q8WWA1 233 aa8.21□□□□□ -1.09
SPEN-202ENST00000438066 GTPBP3Q969Y2 492 aaKnown RBP8.21□□□□□ -1.09
SPEN-202ENST00000438066 SH2B1Q9NRF2 756 aaPredicted RBP8.21□□□□□ -1.09
SPEN-202ENST00000438066 TYW1Q9NV66 732 aaKnown RBP8.21□□□□□ -1.09
SPEN-202ENST00000438066 TRIM33Q9UPN9 1127 aa8.21□□□□□ -1.09
SPEN-202ENST00000438066 PLAAQ9Y263 795 aa8.21□□□□□ -1.09
SPEN-202ENST00000438066 CORINQ9Y5Q5 1042 aa8.21□□□□□ -1.09
SPEN-202ENST00000438066 EIF3AQ14152 1382 aaKnown RBP8.21□□□□□ -1.1
SPEN-202ENST00000438066 RPGRIP1LQ68CZ1 1315 aa8.21□□□□□ -1.1
SPEN-202ENST00000438066 ZFYVE9O95405 1425 aa8.21□□□□□ -1.1
SPEN-202ENST00000438066 ARHGEF28Q8N1W1 1705 aaKnown RBP8.21□□□□□ -1.1
SPEN-202ENST00000438066 AVPP01185 164 aa8.2□□□□□ -1.1
SPEN-202ENST00000438066 LRRFIP1Q32MZ4 808 aaKnown RBP8.2□□□□□ -1.1
SPEN-202ENST00000438066 VHLLQ6RSH7 139 aa8.2□□□□□ -1.1
SPEN-202ENST00000438066 FMNL3Q8IVF7 1028 aa8.2□□□□□ -1.1
SPEN-202ENST00000438066 SYNPOQ8N3V7 929 aa8.2□□□□□ -1.1
SPEN-202ENST00000438066 PRPF38AQ8NAV1 312 aaKnown RBP8.2□□□□□ -1.1
SPEN-202ENST00000438066 ZSWIM2Q8NEG5 633 aa8.2□□□□□ -1.1
SPEN-202ENST00000438066 FAM126AQ9BYI3 521 aaPredicted RBP8.2□□□□□ -1.1
SPEN-202ENST00000438066 HOMER2Q9NSB8 354 aa8.2□□□□□ -1.1
SPEN-202ENST00000438066 PCDHB10Q9UN67 800 aa8.2□□□□□ -1.1
SPEN-202ENST00000438066 PCDHA4Q9UN74 947 aa8.2□□□□□ -1.1
SPEN-202ENST00000438066 PDZRN3Q9UPQ7 1066 aa8.2□□□□□ -1.1
SPEN-202ENST00000438066 QRICH2Q9H0J4 1663 aa8.2□□□□□ -1.1
SPEN-202ENST00000438066 FAM86C2PA6NEL3 165 aa8.2□□□□□ -1.1
SPEN-202ENST00000438066 MEIS3P2A8K0S8 358 aa8.2□□□□□ -1.1
SPEN-202ENST00000438066 GSTP1P09211 210 aaKnown RBP8.2□□□□□ -1.1
SPEN-202ENST00000438066 IKBKEQ14164 716 aa8.2□□□□□ -1.1
SPEN-202ENST00000438066 KRT26Q7Z3Y9 468 aa8.2□□□□□ -1.1
SPEN-202ENST00000438066 DHX37Q8IY37 1157 aaKnown RBP8.2□□□□□ -1.1
SPEN-202ENST00000438066 ACSBG1Q96GR2 724 aa8.2□□□□□ -1.1
SPEN-202ENST00000438066 KTN1Q86UP2 1357 aaKnown RBP8.19□□□□□ -1.1
SPEN-202ENST00000438066 FAM177BA6PVY3 158 aa8.19□□□□□ -1.1
SPEN-202ENST00000438066 IRS4O14654 1257 aaPredicted RBP8.19□□□□□ -1.1
SPEN-202ENST00000438066 SELPP16109 830 aa8.19□□□□□ -1.1
SPEN-202ENST00000438066 CDKN1CP49918 316 aaPredicted RBP8.19□□□□□ -1.1
SPEN-202ENST00000438066 CTBSQ01459 385 aa8.19□□□□□ -1.1
SPEN-202ENST00000438066 WIPI1Q5MNZ9 446 aaPredicted RBP8.19□□□□□ -1.1
SPEN-202ENST00000438066 FAM182BQ5T319 152 aa8.19□□□□□ -1.1
SPEN-202ENST00000438066 HGSNATQ68CP4 663 aa8.19□□□□□ -1.1
SPEN-202ENST00000438066 DDX54Q8TDD1 881 aaKnown RBP8.19□□□□□ -1.1
SPEN-202ENST00000438066 ZNF669Q96BR6 464 aaPredicted RBP8.19□□□□□ -1.1
SPEN-202ENST00000438066 ZNF837Q96EG3 531 aaPredicted RBP8.19□□□□□ -1.1
SPEN-202ENST00000438066 SPATA9Q9BWV2 254 aa8.19□□□□□ -1.1
SPEN-202ENST00000438066 SMG9Q9H0W8 520 aaKnown RBP8.19□□□□□ -1.1
SPEN-202ENST00000438066 ACRP10323 421 aa8.18□□□□□ -1.1
SPEN-202ENST00000438066 MYCLP1P12525 358 aaPredicted RBP8.18□□□□□ -1.1
SPEN-202ENST00000438066 TMF1P82094 1093 aa8.18□□□□□ -1.1
SPEN-202ENST00000438066 CCDC184Q52MB2 194 aa8.18□□□□□ -1.1
SPEN-202ENST00000438066 TMEM67Q5HYA8 995 aa8.18□□□□□ -1.1
SPEN-202ENST00000438066 PERM1Q5SV97 790 aa8.18□□□□□ -1.1
SPEN-202ENST00000438066 UNC5AQ6ZN44 842 aa8.18□□□□□ -1.1
SPEN-202ENST00000438066 NIM1KQ8IY84 436 aa8.18□□□□□ -1.1
SPEN-202ENST00000438066 CCDC155Q8N6L0 562 aa8.18□□□□□ -1.1
SPEN-202ENST00000438066 CEP89Q96ST8 783 aa8.18□□□□□ -1.1
SPEN-202ENST00000438066 ADAM19Q9H013 955 aa8.18□□□□□ -1.1
SPEN-202ENST00000438066 ATP8A1Q9Y2Q0 1164 aa8.18□□□□□ -1.1
SPEN-202ENST00000438066 ASXL1Q8IXJ9 1541 aa8.18□□□□□ -1.1
SPEN-202ENST00000438066 LTBP3Q9NS15 1303 aa8.18□□□□□ -1.1
SPEN-202ENST00000438066 GFRA2O00451 464 aa8.17□□□□□ -1.1
SPEN-202ENST00000438066 MAP4K4O95819 1239 aaPredicted RBP8.17□□□□□ -1.1
SPEN-202ENST00000438066 EPHA1P21709 976 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms