RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 FEZ1Q99689 392 aa24.32■■□□□ 1.48
HLA-B-250ENST00000434333 MBD4O95243 580 aa24.31■■□□□ 1.48
HLA-B-250ENST00000434333 CABP5Q9NP86 173 aa24.31■■□□□ 1.48
HLA-B-250ENST00000434333 BAZ2AQ9UIF9 1905 aaKnown RBP24.3■■□□□ 1.48
HLA-B-250ENST00000434333 VCAM1P19320 739 aa24.3■■□□□ 1.48
HLA-B-250ENST00000434333 USP14P54578 494 aa24.3■■□□□ 1.48
HLA-B-250ENST00000434333 ERVK-9P63128 1117 aa24.3■■□□□ 1.48
HLA-B-250ENST00000434333 ERVK-24P63145 666 aa24.3■■□□□ 1.48
HLA-B-250ENST00000434333 SEPT2Q15019 361 aa24.3■■□□□ 1.48
HLA-B-250ENST00000434333 SLC44A5Q8NCS7 719 aa24.3■■□□□ 1.48
HLA-B-250ENST00000434333 DEFB118Q96PH6 123 aa24.3■■□□□ 1.48
HLA-B-250ENST00000434333 PORCNQ9H237 461 aa24.3■■□□□ 1.48
HLA-B-250ENST00000434333 USP17L15C9J2P7 530 aa24.29■■□□□ 1.48
HLA-B-250ENST00000434333 USP17L13C9JLJ4 530 aa24.29■■□□□ 1.48
HLA-B-250ENST00000434333 USP17L11C9JVI0 530 aa24.29■■□□□ 1.48
HLA-B-250ENST00000434333 USP17L18D6R9N7 530 aa24.29■■□□□ 1.48
HLA-B-250ENST00000434333 USP17L22D6RA61 530 aa24.29■■□□□ 1.48
HLA-B-250ENST00000434333 USP17L17D6RBQ6 530 aa24.29■■□□□ 1.48
HLA-B-250ENST00000434333 USP17L19D6RCP7 530 aa24.29■■□□□ 1.48
HLA-B-250ENST00000434333 USP17L20D6RJB6 530 aa24.29■■□□□ 1.48
HLA-B-250ENST00000434333 CNMDO75829 334 aa24.29■■□□□ 1.48
HLA-B-250ENST00000434333 HMGCRP04035 888 aa24.29■■□□□ 1.48
HLA-B-250ENST00000434333 USP17L24Q0WX57 530 aa24.29■■□□□ 1.48
HLA-B-250ENST00000434333 TRIM32Q13049 653 aa24.29■■□□□ 1.48
HLA-B-250ENST00000434333 UBE3CQ15386 1083 aa24.29■■□□□ 1.48
HLA-B-250ENST00000434333 CATSPERGQ6ZRH7 1159 aa24.29■■□□□ 1.48
HLA-B-250ENST00000434333 GTF3C2Q8WUA4 911 aaPredicted RBP24.29■■□□□ 1.48
HLA-B-250ENST00000434333 TRIB2Q92519 343 aa24.29■■□□□ 1.48
HLA-B-250ENST00000434333 PAGR1Q9BTK6 254 aa24.29■■□□□ 1.48
HLA-B-250ENST00000434333 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.29■■□□□ 1.48
HLA-B-250ENST00000434333 CRISPLD2Q9H0B8 497 aa24.29■■□□□ 1.48
HLA-B-250ENST00000434333 DCTPP1Q9H773 170 aa24.29■■□□□ 1.48
HLA-B-250ENST00000434333 A0A1W2PRG0 241 aa24.28■■□□□ 1.48
HLA-B-250ENST00000434333 SMIM22K7EJ46 135 aa24.28■■□□□ 1.48
HLA-B-250ENST00000434333 FARP2O94887 1054 aaPredicted RBP24.28■■□□□ 1.48
HLA-B-250ENST00000434333 HABP4Q5JVS0 413 aaKnown RBP24.28■■□□□ 1.48
HLA-B-250ENST00000434333 DYNLL2Q96FJ2 89 aa24.28■■□□□ 1.48
HLA-B-250ENST00000434333 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.28■■□□□ 1.48
HLA-B-250ENST00000434333 ATP8A2Q9NTI2 1148 aa24.28■■□□□ 1.48
HLA-B-250ENST00000434333 H0YGN5 161 aa24.27■■□□□ 1.48
HLA-B-250ENST00000434333 SOCS4Q8WXH5 440 aa24.27■■□□□ 1.48
HLA-B-250ENST00000434333 USP6NLQ92738 828 aa24.27■■□□□ 1.48
HLA-B-250ENST00000434333 MYH8P13535 1937 aa24.27■■□□□ 1.48
HLA-B-250ENST00000434333 CYP2B6P20813 491 aa24.26■■□□□ 1.47
HLA-B-250ENST00000434333 MAPK4P31152 587 aa24.26■■□□□ 1.47
HLA-B-250ENST00000434333 LBX2Q6XYB7 198 aa24.26■■□□□ 1.47
HLA-B-250ENST00000434333 GPR142Q7Z601 462 aa24.26■■□□□ 1.47
HLA-B-250ENST00000434333 NUDT12Q9BQG2 462 aa24.26■■□□□ 1.47
HLA-B-250ENST00000434333 PUS7LQ9H0K6 701 aaKnown RBP24.26■■□□□ 1.47
HLA-B-250ENST00000434333 ECHDC1Q9NTX5 307 aa24.26■■□□□ 1.47
HLA-B-250ENST00000434333 SWAP70Q9UH65 585 aa24.26■■□□□ 1.47
HLA-B-250ENST00000434333 RABGAP1Q9Y3P9 1069 aa24.26■■□□□ 1.47
HLA-B-250ENST00000434333 CYP2D7A0A087X1C5 515 aa24.25■■□□□ 1.47
HLA-B-250ENST00000434333 MORN1Q5T089 497 aa24.25■■□□□ 1.47
HLA-B-250ENST00000434333 C12orf60Q5U649 245 aa24.25■■□□□ 1.47
HLA-B-250ENST00000434333 RPAP3Q9H6T3 665 aaPredicted RBP24.25■■□□□ 1.47
HLA-B-250ENST00000434333 CEP290O15078 2479 aa24.24■■□□□ 1.47
HLA-B-250ENST00000434333 MPHOSPH10O00566 681 aaKnown RBP24.24■■□□□ 1.47
HLA-B-250ENST00000434333 XRCC5P13010 732 aaKnown RBP24.24■■□□□ 1.47
HLA-B-250ENST00000434333 CAPN2P17655 700 aa24.24■■□□□ 1.47
HLA-B-250ENST00000434333 MAP3K21Q5TCX8 1036 aa24.24■■□□□ 1.47
HLA-B-250ENST00000434333 TMEM179Q6ZVK1 233 aa24.24■■□□□ 1.47
HLA-B-250ENST00000434333 RPTORQ8N122 1335 aa24.24■■□□□ 1.47
HLA-B-250ENST00000434333 RLFQ13129 1914 aa24.23■■□□□ 1.47
HLA-B-250ENST00000434333 SPDYE16A6NNV3 312 aaPredicted RBP24.23■■□□□ 1.47
HLA-B-250ENST00000434333 USP17L12C9JPN9 530 aa24.23■■□□□ 1.47
HLA-B-250ENST00000434333 USP17L21D6R901 530 aa24.23■■□□□ 1.47
HLA-B-250ENST00000434333 TFRCP02786 760 aaKnown RBP24.23■■□□□ 1.47
HLA-B-250ENST00000434333 AKR1B1P15121 316 aa24.23■■□□□ 1.47
HLA-B-250ENST00000434333 KIAA1755Q5JYT7 1200 aa24.23■■□□□ 1.47
HLA-B-250ENST00000434333 PLEKHH3Q7Z736 793 aa24.23■■□□□ 1.47
HLA-B-250ENST00000434333 CLEC10AQ8IUN9 316 aa24.23■■□□□ 1.47
HLA-B-250ENST00000434333 SIAH1Q8IUQ4 282 aa24.23■■□□□ 1.47
HLA-B-250ENST00000434333 DPF3Q92784 378 aa24.23■■□□□ 1.47
HLA-B-250ENST00000434333 HTATIP2Q9BUP3 242 aa24.23■■□□□ 1.47
HLA-B-250ENST00000434333 BTBD7Q9P203 1132 aa24.23■■□□□ 1.47
HLA-B-250ENST00000434333 COLQQ9Y215 455 aaPredicted RBP24.23■■□□□ 1.47
HLA-B-250ENST00000434333 A0A0G2JMZ2 1700 aa24.22■■□□□ 1.47
HLA-B-250ENST00000434333 TSHZ3Q63HK5 1081 aa24.22■■□□□ 1.47
HLA-B-250ENST00000434333 ZSCAN25Q6NSZ9 544 aa24.22■■□□□ 1.47
HLA-B-250ENST00000434333 HMX1Q9NP08 348 aaPredicted RBP24.22■■□□□ 1.47
HLA-B-250ENST00000434333 PCDHB15Q9Y5E8 787 aa24.22■■□□□ 1.47
HLA-B-250ENST00000434333 SLC4A4Q9Y6R1 1079 aa24.22■■□□□ 1.47
HLA-B-250ENST00000434333 CDK8P49336 464 aa24.21■■□□□ 1.47
HLA-B-250ENST00000434333 C16orf86Q6ZW13 317 aa24.21■■□□□ 1.47
HLA-B-250ENST00000434333 KBTBD3Q8NAB2 608 aa24.21■■□□□ 1.47
HLA-B-250ENST00000434333 ALPK3Q96L96 1907 aa24.2■■□□□ 1.46
HLA-B-250ENST00000434333 PRKAR2AP13861 404 aaKnown RBP24.2■■□□□ 1.46
HLA-B-250ENST00000434333 CCL14Q16627 93 aa24.2■■□□□ 1.46
HLA-B-250ENST00000434333 CTR9Q6PD62 1173 aa24.2■■□□□ 1.46
HLA-B-250ENST00000434333 CCAR1Q8IX12 1150 aaKnown RBP24.2■■□□□ 1.46
HLA-B-250ENST00000434333 DIS3LQ8TF46 1054 aaKnown RBP24.2■■□□□ 1.46
HLA-B-250ENST00000434333 RGS2P41220 211 aa24.19■■□□□ 1.46
HLA-B-250ENST00000434333 MNX1P50219 401 aaPredicted RBP24.19■■□□□ 1.46
HLA-B-250ENST00000434333 CCNA1P78396 465 aa24.19■■□□□ 1.46
HLA-B-250ENST00000434333 PAWRQ96IZ0 340 aaKnown RBP24.19■■□□□ 1.46
HLA-B-250ENST00000434333 CCDC17Q96LX7 622 aa24.19■■□□□ 1.46
HLA-B-250ENST00000434333 STRBPQ96SI9 672 aaKnown RBP24.19■■□□□ 1.46
HLA-B-250ENST00000434333 APBA2Q99767 749 aa24.19■■□□□ 1.46
HLA-B-250ENST00000434333 TMX2Q9Y320 296 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms