RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 KIAA1683Q9H0B3 1180 aa32.89■■■□□ 2.86
LMO1-202ENST00000428101 Q3C1V9 767 aa32.88■■■□□ 2.85
LMO1-202ENST00000428101 U2AF1L4Q8WU68 220 aaKnown RBP32.87■■■□□ 2.85
LMO1-202ENST00000428101 ATP8A2Q9NTI2 1148 aa32.87■■■□□ 2.85
LMO1-202ENST00000428101 ECHDC1Q9NTX5 307 aa32.87■■■□□ 2.85
LMO1-202ENST00000428101 USP14P54578 494 aa32.86■■■□□ 2.85
LMO1-202ENST00000428101 SEPT2Q15019 361 aa32.86■■■□□ 2.85
LMO1-202ENST00000428101 UBE2Q1Q7Z7E8 422 aa32.86■■■□□ 2.85
LMO1-202ENST00000428101 SLC44A5Q8NCS7 719 aa32.86■■■□□ 2.85
LMO1-202ENST00000428101 ERVK-9P63128 1117 aa32.85■■■□□ 2.85
LMO1-202ENST00000428101 ERVK-24P63145 666 aa32.85■■■□□ 2.85
LMO1-202ENST00000428101 GTF3C2Q8WUA4 911 aaPredicted RBP32.85■■■□□ 2.85
LMO1-202ENST00000428101 DYNLL2Q96FJ2 89 aa32.85■■■□□ 2.85
LMO1-202ENST00000428101 MYH8P13535 1937 aa32.85■■■□□ 2.85
LMO1-202ENST00000428101 USP17L15C9J2P7 530 aa32.84■■■□□ 2.85
LMO1-202ENST00000428101 USP17L13C9JLJ4 530 aa32.84■■■□□ 2.85
LMO1-202ENST00000428101 USP17L11C9JVI0 530 aa32.84■■■□□ 2.85
LMO1-202ENST00000428101 USP17L18D6R9N7 530 aa32.84■■■□□ 2.85
LMO1-202ENST00000428101 USP17L22D6RA61 530 aa32.84■■■□□ 2.85
LMO1-202ENST00000428101 USP17L17D6RBQ6 530 aa32.84■■■□□ 2.85
LMO1-202ENST00000428101 USP17L19D6RCP7 530 aa32.84■■■□□ 2.85
LMO1-202ENST00000428101 USP17L20D6RJB6 530 aa32.84■■■□□ 2.85
LMO1-202ENST00000428101 SGPL1O95470 568 aa32.84■■■□□ 2.85
LMO1-202ENST00000428101 VCAM1P19320 739 aa32.84■■■□□ 2.85
LMO1-202ENST00000428101 USP17L24Q0WX57 530 aa32.84■■■□□ 2.85
LMO1-202ENST00000428101 CATSPERGQ6ZRH7 1159 aa32.84■■■□□ 2.85
LMO1-202ENST00000428101 PCDHB15Q9Y5E8 787 aa32.84■■■□□ 2.85
LMO1-202ENST00000428101 SMIM22K7EJ46 135 aa32.83■■■□□ 2.85
LMO1-202ENST00000428101 PUS7LQ9H0K6 701 aaKnown RBP32.83■■■□□ 2.85
LMO1-202ENST00000428101 PAK6Q9NQU5 681 aaPredicted RBP32.83■■■□□ 2.85
LMO1-202ENST00000428101 SWAP70Q9UH65 585 aa32.83■■■□□ 2.85
LMO1-202ENST00000428101 A0A1W2PRG0 241 aa32.82■■■□□ 2.84
LMO1-202ENST00000428101 MPHOSPH10O00566 681 aaKnown RBP32.82■■■□□ 2.84
LMO1-202ENST00000428101 ZSCAN25Q6NSZ9 544 aa32.82■■■□□ 2.84
LMO1-202ENST00000428101 PAGR1Q9BTK6 254 aa32.82■■■□□ 2.84
LMO1-202ENST00000428101 PORCNQ9H237 461 aa32.82■■■□□ 2.84
LMO1-202ENST00000428101 CYP2D7A0A087X1C5 515 aa32.81■■■□□ 2.84
LMO1-202ENST00000428101 CNMDO75829 334 aa32.81■■■□□ 2.84
LMO1-202ENST00000428101 C12orf60Q5U649 245 aa32.81■■■□□ 2.84
LMO1-202ENST00000428101 TSHZ3Q63HK5 1081 aa32.81■■■□□ 2.84
LMO1-202ENST00000428101 HMGCRP04035 888 aa32.8■■■□□ 2.84
LMO1-202ENST00000428101 MAPK4P31152 587 aa32.8■■■□□ 2.84
LMO1-202ENST00000428101 DEFB118Q96PH6 123 aa32.8■■■□□ 2.84
LMO1-202ENST00000428101 SLC4A4Q9Y6R1 1079 aa32.8■■■□□ 2.84
LMO1-202ENST00000428101 USP17L12C9JPN9 530 aa32.79■■■□□ 2.84
LMO1-202ENST00000428101 USP17L21D6R901 530 aa32.79■■■□□ 2.84
LMO1-202ENST00000428101 TRIM32Q13049 653 aa32.79■■■□□ 2.84
LMO1-202ENST00000428101 TMEM179Q6ZVK1 233 aa32.79■■■□□ 2.84
LMO1-202ENST00000428101 GCC1Q96CN9 775 aa32.79■■■□□ 2.84
LMO1-202ENST00000428101 NUDT12Q9BQG2 462 aa32.79■■■□□ 2.84
LMO1-202ENST00000428101 RABGAP1Q9Y3P9 1069 aa32.79■■■□□ 2.84
LMO1-202ENST00000428101 CYP2B6P20813 491 aa32.78■■■□□ 2.84
LMO1-202ENST00000428101 KBTBD3Q8NAB2 608 aa32.78■■■□□ 2.84
LMO1-202ENST00000428101 TRIB2Q92519 343 aa32.78■■■□□ 2.84
LMO1-202ENST00000428101 RPAP3Q9H6T3 665 aaPredicted RBP32.78■■■□□ 2.84
LMO1-202ENST00000428101 CEP290O15078 2479 aa32.78■■■□□ 2.84
LMO1-202ENST00000428101 AKR1B1P15121 316 aa32.77■■■□□ 2.84
LMO1-202ENST00000428101 RRP1P56182 461 aaKnown RBP32.77■■■□□ 2.84
LMO1-202ENST00000428101 LBX2Q6XYB7 198 aa32.77■■■□□ 2.84
LMO1-202ENST00000428101 GPR142Q7Z601 462 aa32.77■■■□□ 2.84
LMO1-202ENST00000428101 SIAH1Q8IUQ4 282 aa32.77■■■□□ 2.84
LMO1-202ENST00000428101 SOCS4Q8WXH5 440 aa32.77■■■□□ 2.84
LMO1-202ENST00000428101 USP6NLQ92738 828 aa32.77■■■□□ 2.84
LMO1-202ENST00000428101 GPATCH3Q96I76 525 aa32.77■■■□□ 2.84
LMO1-202ENST00000428101 CRISPLD2Q9H0B8 497 aa32.77■■■□□ 2.84
LMO1-202ENST00000428101 FARP2O94887 1054 aaPredicted RBP32.76■■■□□ 2.83
LMO1-202ENST00000428101 XRCC5P13010 732 aaKnown RBP32.76■■■□□ 2.83
LMO1-202ENST00000428101 CDK8P49336 464 aa32.76■■■□□ 2.83
LMO1-202ENST00000428101 CTR9Q6PD62 1173 aa32.76■■■□□ 2.83
LMO1-202ENST00000428101 STRBPQ96SI9 672 aaKnown RBP32.76■■■□□ 2.83
LMO1-202ENST00000428101 XRN2Q9H0D6 950 aaKnown RBP eCLIP32.76■■■□□ 2.83
LMO1-202ENST00000428101 TFRCP02786 760 aaKnown RBP32.75■■■□□ 2.83
LMO1-202ENST00000428101 KIAA1755Q5JYT7 1200 aa32.75■■■□□ 2.83
LMO1-202ENST00000428101 MORN1Q5T089 497 aa32.75■■■□□ 2.83
LMO1-202ENST00000428101 C16orf86Q6ZW13 317 aa32.75■■■□□ 2.83
LMO1-202ENST00000428101 PLEKHH3Q7Z736 793 aa32.75■■■□□ 2.83
LMO1-202ENST00000428101 SPDYE16A6NNV3 312 aaPredicted RBP32.74■■■□□ 2.83
LMO1-202ENST00000428101 CAPN2P17655 700 aa32.74■■■□□ 2.83
LMO1-202ENST00000428101 CLEC10AQ8IUN9 316 aa32.74■■■□□ 2.83
LMO1-202ENST00000428101 CCAR1Q8IX12 1150 aaKnown RBP32.74■■■□□ 2.83
LMO1-202ENST00000428101 AMOTL1Q8IY63 956 aa32.74■■■□□ 2.83
LMO1-202ENST00000428101 DDRGK1Q96HY6 314 aa32.74■■■□□ 2.83
LMO1-202ENST00000428101 BTBD7Q9P203 1132 aa32.74■■■□□ 2.83
LMO1-202ENST00000428101 RLFQ13129 1914 aa32.74■■■□□ 2.83
LMO1-202ENST00000428101 RPTORQ8N122 1335 aa32.74■■■□□ 2.83
LMO1-202ENST00000428101 H0YGN5 161 aa32.73■■■□□ 2.83
LMO1-202ENST00000428101 DPF3Q92784 378 aa32.73■■■□□ 2.83
LMO1-202ENST00000428101 OSBP2Q969R2 916 aa32.73■■■□□ 2.83
LMO1-202ENST00000428101 CCDC17Q96LX7 622 aa32.73■■■□□ 2.83
LMO1-202ENST00000428101 RNF113AO15541 343 aaKnown RBP32.71■■■□□ 2.83
LMO1-202ENST00000428101 CCNA1P78396 465 aa32.71■■■□□ 2.83
LMO1-202ENST00000428101 ICA1Q05084 483 aa32.71■■■□□ 2.83
LMO1-202ENST00000428101 HABP4Q5JVS0 413 aaKnown RBP32.71■■■□□ 2.83
LMO1-202ENST00000428101 MAP3K21Q5TCX8 1036 aa32.71■■■□□ 2.83
LMO1-202ENST00000428101 APPBP2Q92624 585 aa32.71■■■□□ 2.83
LMO1-202ENST00000428101 HMX1Q9NP08 348 aaPredicted RBP32.71■■■□□ 2.83
LMO1-202ENST00000428101 TMX2Q9Y320 296 aa32.71■■■□□ 2.83
LMO1-202ENST00000428101 GSG1L2A8MUP6 293 aa32.7■■■□□ 2.83
LMO1-202ENST00000428101 OTUD7AQ8TE49 926 aaPredicted RBP32.7■■■□□ 2.83
LMO1-202ENST00000428101 HTATIP2Q9BUP3 242 aa32.7■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms