RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 PGRP06401 933 aa8.38□□□□□ -1.07
LINC00458-202ENST00000427299 ZSCAN22P10073 491 aaPredicted RBP8.38□□□□□ -1.07
LINC00458-202ENST00000427299 ETV3P41162 512 aa8.38□□□□□ -1.07
LINC00458-202ENST00000427299 GAB4Q2WGN9 574 aa8.38□□□□□ -1.07
LINC00458-202ENST00000427299 SLC6A19Q695T7 634 aa8.38□□□□□ -1.07
LINC00458-202ENST00000427299 EPB41L4BQ9H329 900 aa8.38□□□□□ -1.07
LINC00458-202ENST00000427299 KCNK12Q9HB15 430 aa8.38□□□□□ -1.07
LINC00458-202ENST00000427299 CD320Q9NPF0 282 aa8.38□□□□□ -1.07
LINC00458-202ENST00000427299 WASH4PA8MWX3 477 aa8.37□□□□□ -1.07
LINC00458-202ENST00000427299 HPXP02790 462 aa8.37□□□□□ -1.07
LINC00458-202ENST00000427299 MED14OSP0DP75 135 aa8.37□□□□□ -1.07
LINC00458-202ENST00000427299 LIG3P49916 1009 aa8.37□□□□□ -1.07
LINC00458-202ENST00000427299 ERVFC1P60507 584 aa8.37□□□□□ -1.07
LINC00458-202ENST00000427299 DUSP15Q9H1R2 295 aaPredicted RBP8.37□□□□□ -1.07
LINC00458-202ENST00000427299 DCP1AQ9NPI6 582 aaPredicted RBP8.37□□□□□ -1.07
LINC00458-202ENST00000427299 PRPF40AO75400 957 aaKnown RBP8.36□□□□□ -1.07
LINC00458-202ENST00000427299 LMNB1P20700 586 aa8.36□□□□□ -1.07
LINC00458-202ENST00000427299 HK2P52789 917 aa8.36□□□□□ -1.07
LINC00458-202ENST00000427299 KCNA1Q09470 495 aa8.36□□□□□ -1.07
LINC00458-202ENST00000427299 MCATQ8IVS2 390 aaKnown RBP8.36□□□□□ -1.07
LINC00458-202ENST00000427299 MYLIPQ8WY64 445 aa8.36□□□□□ -1.07
LINC00458-202ENST00000427299 KRTAP4-5Q9BYR2 181 aa8.36□□□□□ -1.07
LINC00458-202ENST00000427299 MIR1-1HGQ9H1L0 117 aa8.36□□□□□ -1.07
LINC00458-202ENST00000427299 NPIPB6E9PJ23 425 aa8.35□□□□□ -1.07
LINC00458-202ENST00000427299 AMIGO3Q86WK7 504 aa8.35□□□□□ -1.07
LINC00458-202ENST00000427299 CREG2Q8IUH2 290 aa8.35□□□□□ -1.07
LINC00458-202ENST00000427299 ACSF2Q96CM8 615 aaPredicted RBP8.35□□□□□ -1.07
LINC00458-202ENST00000427299 ADAMTS10Q9H324 1103 aa8.35□□□□□ -1.07
LINC00458-202ENST00000427299 SP110Q9HB58 689 aa8.35□□□□□ -1.07
LINC00458-202ENST00000427299 ADAM30Q9UKF2 790 aa8.35□□□□□ -1.07
LINC00458-202ENST00000427299 AK5Q9Y6K8 562 aa8.35□□□□□ -1.07
LINC00458-202ENST00000427299 TMEM253P0C7T8 217 aa8.34□□□□□ -1.07
LINC00458-202ENST00000427299 SRFP11831 508 aa8.34□□□□□ -1.07
LINC00458-202ENST00000427299 TFE3P19532 575 aaPredicted RBP8.34□□□□□ -1.07
LINC00458-202ENST00000427299 GLDCP23378 1020 aa8.34□□□□□ -1.07
LINC00458-202ENST00000427299 PDE4BQ07343 736 aa8.34□□□□□ -1.07
LINC00458-202ENST00000427299 TRIM26Q12899 539 aaPredicted RBP8.34□□□□□ -1.07
LINC00458-202ENST00000427299 MAP3K11Q16584 847 aa8.34□□□□□ -1.07
LINC00458-202ENST00000427299 TSNAXIP1Q2TAA8 658 aa8.34□□□□□ -1.07
LINC00458-202ENST00000427299 PPP1R13LQ8WUF5 828 aa8.34□□□□□ -1.07
LINC00458-202ENST00000427299 CEP131Q9UPN4 1083 aa8.34□□□□□ -1.07
LINC00458-202ENST00000427299 TPP2P29144 1249 aaPredicted RBP8.33□□□□□ -1.08
LINC00458-202ENST00000427299 RPL6Q02878 288 aaKnown RBP8.33□□□□□ -1.08
LINC00458-202ENST00000427299 KCNA10Q16322 511 aa8.33□□□□□ -1.08
LINC00458-202ENST00000427299 LILRA6Q6PI73 481 aa8.33□□□□□ -1.08
LINC00458-202ENST00000427299 ATG14Q6ZNE5 492 aa8.33□□□□□ -1.08
LINC00458-202ENST00000427299 TRIT1Q9H3H1 467 aaKnown RBP8.33□□□□□ -1.08
LINC00458-202ENST00000427299 RNF19AQ9NV58 838 aa8.33□□□□□ -1.08
LINC00458-202ENST00000427299 ETV2O00321 342 aaPredicted RBP8.32□□□□□ -1.08
LINC00458-202ENST00000427299 TRHRP34981 398 aaPredicted RBP8.32□□□□□ -1.08
LINC00458-202ENST00000427299 TTLL10Q6ZVT0 673 aa8.32□□□□□ -1.08
LINC00458-202ENST00000427299 DTWD2Q8NBA8 298 aa8.32□□□□□ -1.08
LINC00458-202ENST00000427299 GPR62Q9BZJ7 368 aa8.32□□□□□ -1.08
LINC00458-202ENST00000427299 MEI1Q5TIA1 1274 aa8.31□□□□□ -1.08
LINC00458-202ENST00000427299 CYB5D2Q8WUJ1 264 aa8.31□□□□□ -1.08
LINC00458-202ENST00000427299 SLC26A8Q96RN1 970 aa8.31□□□□□ -1.08
LINC00458-202ENST00000427299 DUSP9Q99956 384 aaKnown RBP8.31□□□□□ -1.08
LINC00458-202ENST00000427299 RNF32Q9H0A6 362 aa8.31□□□□□ -1.08
LINC00458-202ENST00000427299 RAPGEFL1Q9UHV5 662 aa8.31□□□□□ -1.08
LINC00458-202ENST00000427299 DUSP13Q9UII6 198 aa8.31□□□□□ -1.08
LINC00458-202ENST00000427299 TCAF2A6NFQ2 919 aa8.3□□□□□ -1.08
LINC00458-202ENST00000427299 ZGLP1P0C6A0 271 aa8.3□□□□□ -1.08
LINC00458-202ENST00000427299 TSPYL5Q86VY4 417 aaPredicted RBP8.3□□□□□ -1.08
LINC00458-202ENST00000427299 PDZD8Q8NEN9 1154 aa8.3□□□□□ -1.08
LINC00458-202ENST00000427299 GPATCH2Q9NW75 528 aa8.3□□□□□ -1.08
LINC00458-202ENST00000427299 SMG5Q9UPR3 1016 aaKnown RBP8.3□□□□□ -1.08
LINC00458-202ENST00000427299 EGR3Q06889 387 aa8.29□□□□□ -1.08
LINC00458-202ENST00000427299 C19orf44Q9H6X5 657 aa8.29□□□□□ -1.08
LINC00458-202ENST00000427299 TLR6Q9Y2C9 796 aa8.29□□□□□ -1.08
LINC00458-202ENST00000427299 CORINQ9Y5Q5 1042 aa8.29□□□□□ -1.08
LINC00458-202ENST00000427299 RLBP1P12271 317 aa8.28□□□□□ -1.08
LINC00458-202ENST00000427299 LINC00310P59036 64 aa8.28□□□□□ -1.08
LINC00458-202ENST00000427299 TIGD5Q53EQ6 642 aa8.28□□□□□ -1.08
LINC00458-202ENST00000427299 LCE5AQ5TCM9 118 aa8.28□□□□□ -1.08
LINC00458-202ENST00000427299 CIAPIN1Q6FI81 312 aa8.28□□□□□ -1.08
LINC00458-202ENST00000427299 JARID2Q92833 1246 aaPredicted RBP8.28□□□□□ -1.08
LINC00458-202ENST00000427299 NOC4LQ9BVI4 516 aaKnown RBP8.28□□□□□ -1.08
LINC00458-202ENST00000427299 UPK3BL1B0FP48 263 aa8.27□□□□□ -1.09
LINC00458-202ENST00000427299 UPK3BL2E5RIL1 263 aa8.27□□□□□ -1.09
LINC00458-202ENST00000427299 TMEM201Q5SNT2 666 aa8.27□□□□□ -1.09
LINC00458-202ENST00000427299 LILRA2Q8N149 483 aa8.27□□□□□ -1.09
LINC00458-202ENST00000427299 PHC3Q8NDX5 983 aa8.27□□□□□ -1.09
LINC00458-202ENST00000427299 KCNN1Q92952 543 aa8.27□□□□□ -1.09
LINC00458-202ENST00000427299 KCNH3Q9ULD8 1083 aa8.27□□□□□ -1.09
LINC00458-202ENST00000427299 PCDHA11Q9Y5I1 949 aa8.27□□□□□ -1.09
LINC00458-202ENST00000427299 PLCG1P19174 1290 aa8.26□□□□□ -1.09
LINC00458-202ENST00000427299 ST13P50502 369 aaKnown RBP8.26□□□□□ -1.09
LINC00458-202ENST00000427299 NR0B2Q15466 257 aa8.26□□□□□ -1.09
LINC00458-202ENST00000427299 CCDC84Q86UT8 332 aaPredicted RBP8.26□□□□□ -1.09
LINC00458-202ENST00000427299 IRF2BP1Q8IU81 584 aa8.26□□□□□ -1.09
LINC00458-202ENST00000427299 OXR1Q8N573 874 aa8.26□□□□□ -1.09
LINC00458-202ENST00000427299 FAM13CQ8NE31 585 aa8.26□□□□□ -1.09
LINC00458-202ENST00000427299 RNF141Q8WVD5 230 aa8.26□□□□□ -1.09
LINC00458-202ENST00000427299 NCANO14594 1321 aa8.26□□□□□ -1.09
LINC00458-202ENST00000427299 FITM1A5D6W6 292 aa8.25□□□□□ -1.09
LINC00458-202ENST00000427299 LRRN2O75325 713 aa8.25□□□□□ -1.09
LINC00458-202ENST00000427299 CILPO75339 1184 aa8.25□□□□□ -1.09
LINC00458-202ENST00000427299 LTKP29376 864 aa8.25□□□□□ -1.09
LINC00458-202ENST00000427299 YARSP54577 528 aaKnown RBP8.25□□□□□ -1.09
LINC00458-202ENST00000427299 SLFN12Q8IYM2 578 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms