RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 ZKSCAN1P17029 563 aaPredicted RBP19.59■□□□□ 0.73
COL18A1-205ENST00000423214 TRMT44Q8IYL2 757 aaKnown RBP19.59■□□□□ 0.73
COL18A1-205ENST00000423214 DIS3LQ8TF46 1054 aaKnown RBP19.59■□□□□ 0.73
COL18A1-205ENST00000423214 KIF1BPQ96EK5 621 aa19.59■□□□□ 0.73
COL18A1-205ENST00000423214 C12orf42Q96LP6 360 aa19.59■□□□□ 0.73
COL18A1-205ENST00000423214 DNAJC2Q99543 621 aaKnown RBP19.59■□□□□ 0.73
COL18A1-205ENST00000423214 ZNF236Q9UL36 1845 aa19.58■□□□□ 0.73
COL18A1-205ENST00000423214 USP17L15C9J2P7 530 aa19.58■□□□□ 0.72
COL18A1-205ENST00000423214 USP17L13C9JLJ4 530 aa19.58■□□□□ 0.72
COL18A1-205ENST00000423214 USP17L11C9JVI0 530 aa19.58■□□□□ 0.72
COL18A1-205ENST00000423214 USP17L18D6R9N7 530 aa19.58■□□□□ 0.72
COL18A1-205ENST00000423214 USP17L22D6RA61 530 aa19.58■□□□□ 0.72
COL18A1-205ENST00000423214 USP17L17D6RBQ6 530 aa19.58■□□□□ 0.72
COL18A1-205ENST00000423214 USP17L19D6RCP7 530 aa19.58■□□□□ 0.72
COL18A1-205ENST00000423214 USP17L20D6RJB6 530 aa19.58■□□□□ 0.72
COL18A1-205ENST00000423214 IFIT2P09913 472 aaKnown RBP19.58■□□□□ 0.72
COL18A1-205ENST00000423214 PRKAR2AP13861 404 aaKnown RBP19.58■□□□□ 0.72
COL18A1-205ENST00000423214 RGS2P41220 211 aa19.58■□□□□ 0.72
COL18A1-205ENST00000423214 USP17L24Q0WX57 530 aa19.58■□□□□ 0.72
COL18A1-205ENST00000423214 SLC9C2Q5TAH2 1124 aa19.58■□□□□ 0.72
COL18A1-205ENST00000423214 GPR142Q7Z601 462 aa19.58■□□□□ 0.72
COL18A1-205ENST00000423214 RIOK1Q9BRS2 568 aaKnown RBP19.58■□□□□ 0.72
COL18A1-205ENST00000423214 RBPJLQ9UBG7 517 aa19.58■□□□□ 0.72
COL18A1-205ENST00000423214 DDX19BQ9UMR2 479 aa19.58■□□□□ 0.72
COL18A1-205ENST00000423214 COL11A1P12107 1806 aaPredicted RBP19.58■□□□□ 0.72
COL18A1-205ENST00000423214 XRCC5P13010 732 aaKnown RBP19.57■□□□□ 0.72
COL18A1-205ENST00000423214 PDE6AP16499 860 aa19.57■□□□□ 0.72
COL18A1-205ENST00000423214 CCNA1P78396 465 aa19.57■□□□□ 0.72
COL18A1-205ENST00000423214 PLEKHH3Q7Z736 793 aa19.57■□□□□ 0.72
COL18A1-205ENST00000423214 APBA2Q99767 749 aa19.57■□□□□ 0.72
COL18A1-205ENST00000423214 KIAA1683Q9H0B3 1180 aa19.57■□□□□ 0.72
COL18A1-205ENST00000423214 PORCNQ9H237 461 aa19.57■□□□□ 0.72
COL18A1-205ENST00000423214 SZT2Q5T011 3432 aa19.57■□□□□ 0.72
COL18A1-205ENST00000423214 RLFQ13129 1914 aa19.57■□□□□ 0.72
COL18A1-205ENST00000423214 GOLIM4O00461 696 aa19.56■□□□□ 0.72
COL18A1-205ENST00000423214 GLRX3O76003 335 aaKnown RBP19.56■□□□□ 0.72
COL18A1-205ENST00000423214 VCAM1P19320 739 aa19.56■□□□□ 0.72
COL18A1-205ENST00000423214 SHMT1P34896 483 aa19.56■□□□□ 0.72
COL18A1-205ENST00000423214 PLCD1P51178 756 aa19.56■□□□□ 0.72
COL18A1-205ENST00000423214 WDR78Q5VTH9 848 aa19.56■□□□□ 0.72
COL18A1-205ENST00000423214 RPAP2Q8IXW5 612 aaPredicted RBP19.56■□□□□ 0.72
COL18A1-205ENST00000423214 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.56■□□□□ 0.72
COL18A1-205ENST00000423214 NBPF3Q9H094 633 aa19.56■□□□□ 0.72
COL18A1-205ENST00000423214 MCM9Q9NXL9 1143 aa19.56■□□□□ 0.72
COL18A1-205ENST00000423214 RABGAP1Q9Y3P9 1069 aa19.56■□□□□ 0.72
COL18A1-205ENST00000423214 ZNF532Q9HCE3 1301 aa19.55■□□□□ 0.72
COL18A1-205ENST00000423214 ZNFX1Q9P2E3 1918 aaKnown RBP19.55■□□□□ 0.72
COL18A1-205ENST00000423214 MPHOSPH10O00566 681 aaKnown RBP19.55■□□□□ 0.72
COL18A1-205ENST00000423214 Q3C1V9 767 aa19.55■□□□□ 0.72
COL18A1-205ENST00000423214 MAP3K21Q5TCX8 1036 aa19.55■□□□□ 0.72
COL18A1-205ENST00000423214 C7orf61Q8IZ16 206 aa19.55■□□□□ 0.72
COL18A1-205ENST00000423214 COG6Q9Y2V7 657 aa19.55■□□□□ 0.72
COL18A1-205ENST00000423214 ACER1Q8TDN7 264 aa19.54■□□□□ 0.72
COL18A1-205ENST00000423214 CHMP4BQ9H444 224 aaKnown RBP19.54■□□□□ 0.72
COL18A1-205ENST00000423214 C11orf49Q9H6J7 331 aa19.54■□□□□ 0.72
COL18A1-205ENST00000423214 A0A1W2PPC1 479 aa19.53■□□□□ 0.72
COL18A1-205ENST00000423214 RAB11FIP3O75154 756 aa19.53■□□□□ 0.72
COL18A1-205ENST00000423214 CCL14Q16627 93 aa19.53■□□□□ 0.72
COL18A1-205ENST00000423214 MORN1Q5T089 497 aa19.53■□□□□ 0.72
COL18A1-205ENST00000423214 CATSPERGQ6ZRH7 1159 aa19.53■□□□□ 0.72
COL18A1-205ENST00000423214 SDR42E1Q8WUS8 393 aa19.53■□□□□ 0.72
COL18A1-205ENST00000423214 PRO3102Q9H379 93 aa19.53■□□□□ 0.72
COL18A1-205ENST00000423214 RPAP3Q9H6T3 665 aaPredicted RBP19.53■□□□□ 0.72
COL18A1-205ENST00000423214 OGDHLQ9ULD0 1010 aa19.53■□□□□ 0.72
COL18A1-205ENST00000423214 IVNS1ABPQ9Y6Y0 642 aa19.53■□□□□ 0.72
COL18A1-205ENST00000423214 PLXNA1Q9UIW2 1896 aa19.53■□□□□ 0.72
COL18A1-205ENST00000423214 GABPAQ06546 454 aa19.52■□□□□ 0.72
COL18A1-205ENST00000423214 CACNB2Q08289 660 aaPredicted RBP19.52■□□□□ 0.72
COL18A1-205ENST00000423214 MAP2K5Q13163 448 aa19.52■□□□□ 0.72
COL18A1-205ENST00000423214 SEPT2Q15019 361 aa19.52■□□□□ 0.72
COL18A1-205ENST00000423214 LCORLQ8N3X6 602 aa19.52■□□□□ 0.72
COL18A1-205ENST00000423214 USP6NLQ92738 828 aa19.52■□□□□ 0.72
COL18A1-205ENST00000423214 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.52■□□□□ 0.727e-10■■■■□ 25.1
COL18A1-205ENST00000423214 PAG1Q9NWQ8 432 aa19.52■□□□□ 0.72
COL18A1-205ENST00000423214 MYH4Q9Y623 1939 aa19.51■□□□□ 0.71
COL18A1-205ENST00000423214 TCRBV5S4A2TA0A5A2 114 aa19.51■□□□□ 0.71
COL18A1-205ENST00000423214 SPDYE16A6NNV3 312 aaPredicted RBP19.51■□□□□ 0.71
COL18A1-205ENST00000423214 CNMDO75829 334 aa19.51■□□□□ 0.71
COL18A1-205ENST00000423214 LBX2Q6XYB7 198 aa19.51■□□□□ 0.71
COL18A1-205ENST00000423214 EDC3Q96F86 508 aaKnown RBP19.51■□□□□ 0.71
COL18A1-205ENST00000423214 TANGO6Q9C0B7 1094 aa19.51■□□□□ 0.71
COL18A1-205ENST00000423214 DCP1AQ9NPI6 582 aaPredicted RBP19.51■□□□□ 0.71
COL18A1-205ENST00000423214 CCND3P30281 292 aaPredicted RBP19.5■□□□□ 0.71
COL18A1-205ENST00000423214 GUCY1A2P33402 732 aa19.5■□□□□ 0.71
COL18A1-205ENST00000423214 MFSD14CQ5VZR4 134 aa19.5■□□□□ 0.71
COL18A1-205ENST00000423214 POTEEQ6S8J3 1075 aa19.5■□□□□ 0.71
COL18A1-205ENST00000423214 AMOTL1Q8IY63 956 aa19.5■□□□□ 0.71
COL18A1-205ENST00000423214 BOLA2Q9H3K6 86 aa19.5■□□□□ 0.71
COL18A1-205ENST00000423214 ARMT1Q9H993 441 aa19.5■□□□□ 0.71
COL18A1-205ENST00000423214 ZBTB40Q9NUA8 1239 aa19.5■□□□□ 0.71
COL18A1-205ENST00000423214 STAP2Q9UGK3 403 aa19.5■□□□□ 0.71
COL18A1-205ENST00000423214 SWAP70Q9UH65 585 aa19.5■□□□□ 0.71
COL18A1-205ENST00000423214 ZMYND8Q9ULU4 1186 aaPredicted RBP19.5■□□□□ 0.71
COL18A1-205ENST00000423214 SLC15A5A6NIM6 579 aa19.49■□□□□ 0.71
COL18A1-205ENST00000423214 MBD4O95243 580 aa19.49■□□□□ 0.71
COL18A1-205ENST00000423214 EVX2Q03828 476 aa19.49■□□□□ 0.71
COL18A1-205ENST00000423214 TMEM179Q6ZVK1 233 aa19.49■□□□□ 0.71
COL18A1-205ENST00000423214 SIRT2Q8IXJ6 389 aa19.49■□□□□ 0.71
COL18A1-205ENST00000423214 DDRGK1Q96HY6 314 aa19.49■□□□□ 0.71
COL18A1-205ENST00000423214 BTBD7Q9P203 1132 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms