RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 SEPT2Q15019 361 aa30.72■■■□□ 2.51
SMDT1-202ENST00000422252 SHISA4Q96DD7 197 aa30.72■■■□□ 2.51
SMDT1-202ENST00000422252 DYNLL2Q96FJ2 89 aa30.72■■■□□ 2.51
SMDT1-202ENST00000422252 PUS7LQ9H0K6 701 aaKnown RBP30.72■■■□□ 2.51
SMDT1-202ENST00000422252 RBPJLQ9UBG7 517 aa30.72■■■□□ 2.51
SMDT1-202ENST00000422252 DOCK3Q8IZD9 2030 aa30.72■■■□□ 2.51
SMDT1-202ENST00000422252 USP17L15C9J2P7 530 aa30.71■■■□□ 2.51
SMDT1-202ENST00000422252 USP17L13C9JLJ4 530 aa30.71■■■□□ 2.51
SMDT1-202ENST00000422252 USP17L11C9JVI0 530 aa30.71■■■□□ 2.51
SMDT1-202ENST00000422252 USP17L18D6R9N7 530 aa30.71■■■□□ 2.51
SMDT1-202ENST00000422252 USP17L22D6RA61 530 aa30.71■■■□□ 2.51
SMDT1-202ENST00000422252 USP17L17D6RBQ6 530 aa30.71■■■□□ 2.51
SMDT1-202ENST00000422252 USP17L19D6RCP7 530 aa30.71■■■□□ 2.51
SMDT1-202ENST00000422252 USP17L20D6RJB6 530 aa30.71■■■□□ 2.51
SMDT1-202ENST00000422252 PEX10O60683 326 aa30.71■■■□□ 2.51
SMDT1-202ENST00000422252 GJA8P48165 433 aa30.71■■■□□ 2.51
SMDT1-202ENST00000422252 USP17L24Q0WX57 530 aa30.71■■■□□ 2.51
SMDT1-202ENST00000422252 TSHZ3Q63HK5 1081 aa30.71■■■□□ 2.51
SMDT1-202ENST00000422252 AMOTL1Q8IY63 956 aa30.71■■■□□ 2.51
SMDT1-202ENST00000422252 SLC44A5Q8NCS7 719 aa30.71■■■□□ 2.51
SMDT1-202ENST00000422252 DDRGK1Q96HY6 314 aa30.71■■■□□ 2.51
SMDT1-202ENST00000422252 UNC93B1Q9H1C4 597 aa30.71■■■□□ 2.51
SMDT1-202ENST00000422252 GJD2Q9UKL4 321 aa30.71■■■□□ 2.51
SMDT1-202ENST00000422252 SLC4A4Q9Y6R1 1079 aa30.71■■■□□ 2.51
SMDT1-202ENST00000422252 KBTBD3Q8NAB2 608 aa30.7■■■□□ 2.51
SMDT1-202ENST00000422252 VCAM1P19320 739 aa30.69■■■□□ 2.5
SMDT1-202ENST00000422252 ERVK-9P63128 1117 aa30.69■■■□□ 2.5
SMDT1-202ENST00000422252 ERVK-24P63145 666 aa30.69■■■□□ 2.5
SMDT1-202ENST00000422252 C12orf60Q5U649 245 aa30.69■■■□□ 2.5
SMDT1-202ENST00000422252 CATSPERGQ6ZRH7 1159 aa30.69■■■□□ 2.5
SMDT1-202ENST00000422252 PAGR1Q9BTK6 254 aa30.69■■■□□ 2.5
SMDT1-202ENST00000422252 USP17L12C9JPN9 530 aa30.68■■■□□ 2.5
SMDT1-202ENST00000422252 USP17L21D6R901 530 aa30.68■■■□□ 2.5
SMDT1-202ENST00000422252 TMEM179Q6ZVK1 233 aa30.68■■■□□ 2.5
SMDT1-202ENST00000422252 BAZ2AQ9UIF9 1905 aaKnown RBP30.68■■■□□ 2.5
SMDT1-202ENST00000422252 CYP2D7A0A087X1C5 515 aa30.67■■■□□ 2.5
SMDT1-202ENST00000422252 Q3C1V9 767 aa30.67■■■□□ 2.5
SMDT1-202ENST00000422252 POTEEQ6S8J3 1075 aa30.67■■■□□ 2.5
SMDT1-202ENST00000422252 YTHDC1Q96MU7 727 aaKnown RBP30.67■■■□□ 2.5
SMDT1-202ENST00000422252 MAPK4P31152 587 aa30.66■■■□□ 2.5
SMDT1-202ENST00000422252 U2AF1L4Q8WU68 220 aaKnown RBP30.66■■■□□ 2.5
SMDT1-202ENST00000422252 RABGAP1Q9Y3P9 1069 aa30.66■■■□□ 2.5
SMDT1-202ENST00000422252 TTC41PQ6P2S7 1318 aa30.66■■■□□ 2.5
SMDT1-202ENST00000422252 A0A1W2PRG0 241 aa30.65■■■□□ 2.5
SMDT1-202ENST00000422252 CDK8P49336 464 aa30.65■■■□□ 2.5
SMDT1-202ENST00000422252 CTR9Q6PD62 1173 aa30.65■■■□□ 2.5
SMDT1-202ENST00000422252 CCAR1Q8IX12 1150 aaKnown RBP30.65■■■□□ 2.5
SMDT1-202ENST00000422252 STRBPQ96SI9 672 aaKnown RBP30.65■■■□□ 2.5
SMDT1-202ENST00000422252 CRBNQ96SW2 442 aa30.65■■■□□ 2.5
SMDT1-202ENST00000422252 RPAP3Q9H6T3 665 aaPredicted RBP30.65■■■□□ 2.5
SMDT1-202ENST00000422252 SMIM22K7EJ46 135 aa30.64■■■□□ 2.5
SMDT1-202ENST00000422252 RNF113AO15541 343 aaKnown RBP30.64■■■□□ 2.5
SMDT1-202ENST00000422252 HMGCRP04035 888 aa30.64■■■□□ 2.5
SMDT1-202ENST00000422252 AKR1B1P15121 316 aa30.64■■■□□ 2.5
SMDT1-202ENST00000422252 C16orf86Q6ZW13 317 aa30.64■■■□□ 2.5
SMDT1-202ENST00000422252 SOCS4Q8WXH5 440 aa30.64■■■□□ 2.5
SMDT1-202ENST00000422252 APPBP2Q92624 585 aa30.64■■■□□ 2.5
SMDT1-202ENST00000422252 CCDC17Q96LX7 622 aa30.64■■■□□ 2.5
SMDT1-202ENST00000422252 NUDT12Q9BQG2 462 aa30.64■■■□□ 2.5
SMDT1-202ENST00000422252 PORCNQ9H237 461 aa30.64■■■□□ 2.5
SMDT1-202ENST00000422252 ERC2O15083 957 aa30.63■■■□□ 2.49
SMDT1-202ENST00000422252 CNMDO75829 334 aa30.63■■■□□ 2.49
SMDT1-202ENST00000422252 SGPL1O95470 568 aa30.63■■■□□ 2.49
SMDT1-202ENST00000422252 ZFYP08048 801 aaPredicted RBP30.63■■■□□ 2.49
SMDT1-202ENST00000422252 LBX2Q6XYB7 198 aa30.63■■■□□ 2.49
SMDT1-202ENST00000422252 OSBP2Q969R2 916 aa30.63■■■□□ 2.49
SMDT1-202ENST00000422252 PAK6Q9NQU5 681 aaPredicted RBP30.63■■■□□ 2.49
SMDT1-202ENST00000422252 ARPP21Q9UBL0 812 aaPredicted RBP30.63■■■□□ 2.49
SMDT1-202ENST00000422252 MYH8P13535 1937 aa30.63■■■□□ 2.49
SMDT1-202ENST00000422252 PLXNB2O15031 1838 aa30.62■■■□□ 2.49
SMDT1-202ENST00000422252 GPR142Q7Z601 462 aa30.62■■■□□ 2.49
SMDT1-202ENST00000422252 CYP2B6P20813 491 aa30.61■■■□□ 2.49
SMDT1-202ENST00000422252 CCNA1P78396 465 aa30.61■■■□□ 2.49
SMDT1-202ENST00000422252 ICA1Q05084 483 aa30.61■■■□□ 2.49
SMDT1-202ENST00000422252 PI4K2BQ8TCG2 481 aa30.61■■■□□ 2.49
SMDT1-202ENST00000422252 OTUD7AQ8TE49 926 aaPredicted RBP30.61■■■□□ 2.49
SMDT1-202ENST00000422252 DEFB118Q96PH6 123 aa30.61■■■□□ 2.49
SMDT1-202ENST00000422252 CAPN2P17655 700 aa30.6■■■□□ 2.49
SMDT1-202ENST00000422252 LRRFIP1Q32MZ4 808 aaKnown RBP30.6■■■□□ 2.49
SMDT1-202ENST00000422252 GIMAP6Q6P9H5 292 aa30.6■■■□□ 2.49
SMDT1-202ENST00000422252 PLEKHH3Q7Z736 793 aa30.6■■■□□ 2.49
SMDT1-202ENST00000422252 UBE2Q1Q7Z7E8 422 aa30.6■■■□□ 2.49
SMDT1-202ENST00000422252 CLEC10AQ8IUN9 316 aa30.6■■■□□ 2.49
SMDT1-202ENST00000422252 ARHGEF10LQ9HCE6 1279 aa30.6■■■□□ 2.49
SMDT1-202ENST00000422252 SPDYE16A6NNV3 312 aaPredicted RBP30.59■■■□□ 2.49
SMDT1-202ENST00000422252 GSG1L2A8MUP6 293 aa30.59■■■□□ 2.49
SMDT1-202ENST00000422252 GLRX3O76003 335 aaKnown RBP30.59■■■□□ 2.49
SMDT1-202ENST00000422252 XRCC5P13010 732 aaKnown RBP30.59■■■□□ 2.49
SMDT1-202ENST00000422252 SIAH1Q8IUQ4 282 aa30.59■■■□□ 2.49
SMDT1-202ENST00000422252 TRIB2Q92519 343 aa30.59■■■□□ 2.49
SMDT1-202ENST00000422252 SH2D4AQ9H788 454 aa30.59■■■□□ 2.49
SMDT1-202ENST00000422252 CWC22Q9HCG8 908 aaKnown RBP30.59■■■□□ 2.49
SMDT1-202ENST00000422252 SBK1Q52WX2 424 aa30.58■■■□□ 2.49
SMDT1-202ENST00000422252 MORN1Q5T089 497 aa30.58■■■□□ 2.49
SMDT1-202ENST00000422252 USP6NLQ92738 828 aa30.58■■■□□ 2.49
SMDT1-202ENST00000422252 GCC1Q96CN9 775 aa30.58■■■□□ 2.49
SMDT1-202ENST00000422252 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.58■■■□□ 2.49
SMDT1-202ENST00000422252 BTBD7Q9P203 1132 aa30.58■■■□□ 2.49
SMDT1-202ENST00000422252 TMX2Q9Y320 296 aa30.58■■■□□ 2.49
SMDT1-202ENST00000422252 RPTORQ8N122 1335 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms