RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 GPRC5AQ8NFJ5 357 aa18.78■□□□□ 0.6
ACTB-202ENST00000414620 DEFB118Q96PH6 123 aa18.78■□□□□ 0.6
ACTB-202ENST00000414620 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.78■□□□□ 0.68e-19■□□□□ 10.2
ACTB-202ENST00000414620 PARP14Q460N5 1801 aa18.78■□□□□ 0.6
ACTB-202ENST00000414620 FRMPD3Q5JV73 1810 aa18.77■□□□□ 0.6
ACTB-202ENST00000414620 FARP2O94887 1054 aaPredicted RBP18.77■□□□□ 0.6
ACTB-202ENST00000414620 SGPL1O95470 568 aa18.77■□□□□ 0.6
ACTB-202ENST00000414620 ERVK-9P63128 1117 aa18.77■□□□□ 0.6
ACTB-202ENST00000414620 ERVK-24P63145 666 aa18.77■□□□□ 0.6
ACTB-202ENST00000414620 TRIM32Q13049 653 aa18.77■□□□□ 0.6
ACTB-202ENST00000414620 Q3C1V9 767 aa18.77■□□□□ 0.6
ACTB-202ENST00000414620 GCC1Q96CN9 775 aa18.77■□□□□ 0.6
ACTB-202ENST00000414620 DYNLL2Q96FJ2 89 aa18.77■□□□□ 0.6
ACTB-202ENST00000414620 C12orf42Q96LP6 360 aa18.77■□□□□ 0.6
ACTB-202ENST00000414620 RBPJLQ9UBG7 517 aa18.77■□□□□ 0.6
ACTB-202ENST00000414620 GJD2Q9UKL4 321 aa18.77■□□□□ 0.6
ACTB-202ENST00000414620 RLFQ13129 1914 aa18.76■□□□□ 0.59
ACTB-202ENST00000414620 HMGCRP04035 888 aa18.76■□□□□ 0.59
ACTB-202ENST00000414620 VCAM1P19320 739 aa18.76■□□□□ 0.59
ACTB-202ENST00000414620 USP14P54578 494 aa18.76■□□□□ 0.59
ACTB-202ENST00000414620 TSHZ3Q63HK5 1081 aa18.76■□□□□ 0.59
ACTB-202ENST00000414620 POTEEQ6S8J3 1075 aa18.76■□□□□ 0.59
ACTB-202ENST00000414620 DPF3Q92784 378 aa18.76■□□□□ 0.59
ACTB-202ENST00000414620 KIAA1683Q9H0B3 1180 aa18.76■□□□□ 0.59
ACTB-202ENST00000414620 PORCNQ9H237 461 aa18.76■□□□□ 0.59
ACTB-202ENST00000414620 COL11A1P12107 1806 aaPredicted RBP18.76■□□□□ 0.59
ACTB-202ENST00000414620 A0A0G2JMZ2 1700 aa18.75■□□□□ 0.59
ACTB-202ENST00000414620 CYP2D7A0A087X1C5 515 aa18.75■□□□□ 0.59
ACTB-202ENST00000414620 USP17L15C9J2P7 530 aa18.75■□□□□ 0.59
ACTB-202ENST00000414620 USP17L13C9JLJ4 530 aa18.75■□□□□ 0.59
ACTB-202ENST00000414620 USP17L11C9JVI0 530 aa18.75■□□□□ 0.59
ACTB-202ENST00000414620 USP17L18D6R9N7 530 aa18.75■□□□□ 0.59
ACTB-202ENST00000414620 USP17L22D6RA61 530 aa18.75■□□□□ 0.59
ACTB-202ENST00000414620 USP17L17D6RBQ6 530 aa18.75■□□□□ 0.59
ACTB-202ENST00000414620 USP17L19D6RCP7 530 aa18.75■□□□□ 0.59
ACTB-202ENST00000414620 USP17L20D6RJB6 530 aa18.75■□□□□ 0.59
ACTB-202ENST00000414620 SMIM22K7EJ46 135 aa18.75■□□□□ 0.59
ACTB-202ENST00000414620 TFRCP02786 760 aaKnown RBP18.75■□□□□ 0.59
ACTB-202ENST00000414620 USP17L24Q0WX57 530 aa18.75■□□□□ 0.59
ACTB-202ENST00000414620 CLEC10AQ8IUN9 316 aa18.75■□□□□ 0.59
ACTB-202ENST00000414620 CCAR1Q8IX12 1150 aaKnown RBP18.75■□□□□ 0.59
ACTB-202ENST00000414620 TRIB2Q92519 343 aa18.75■□□□□ 0.59
ACTB-202ENST00000414620 NUDT12Q9BQG2 462 aa18.75■□□□□ 0.59
ACTB-202ENST00000414620 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.75■□□□□ 0.594e-14■■■□□ 15.2
ACTB-202ENST00000414620 PAK6Q9NQU5 681 aaPredicted RBP18.75■□□□□ 0.59
ACTB-202ENST00000414620 H0YGN5 161 aa18.74■□□□□ 0.59
ACTB-202ENST00000414620 CNMDO75829 334 aa18.74■□□□□ 0.59
ACTB-202ENST00000414620 HABP4Q5JVS0 413 aaKnown RBP18.74■□□□□ 0.59
ACTB-202ENST00000414620 CATSPERGQ6ZRH7 1159 aa18.74■□□□□ 0.59
ACTB-202ENST00000414620 UBE2Q1Q7Z7E8 422 aa18.74■□□□□ 0.59
ACTB-202ENST00000414620 GTF3C2Q8WUA4 911 aaPredicted RBP18.74■□□□□ 0.59
ACTB-202ENST00000414620 RPAP3Q9H6T3 665 aaPredicted RBP18.74■□□□□ 0.59
ACTB-202ENST00000414620 CWC22Q9HCG8 908 aaKnown RBP18.74■□□□□ 0.59
ACTB-202ENST00000414620 A0A1W2PRG0 241 aa18.73■□□□□ 0.59
ACTB-202ENST00000414620 MAPK4P31152 587 aa18.73■□□□□ 0.59
ACTB-202ENST00000414620 UBE3CQ15386 1083 aa18.73■□□□□ 0.59
ACTB-202ENST00000414620 WDR78Q5VTH9 848 aa18.73■□□□□ 0.59
ACTB-202ENST00000414620 GPR142Q7Z601 462 aa18.73■□□□□ 0.59
ACTB-202ENST00000414620 SOCS4Q8WXH5 440 aa18.73■□□□□ 0.59
ACTB-202ENST00000414620 PUS7LQ9H0K6 701 aaKnown RBP18.73■□□□□ 0.59
ACTB-202ENST00000414620 ATP8A2Q9NTI2 1148 aa18.73■□□□□ 0.59
ACTB-202ENST00000414620 ECHDC1Q9NTX5 307 aa18.73■□□□□ 0.59
ACTB-202ENST00000414620 SLC4A4Q9Y6R1 1079 aa18.73■□□□□ 0.59
ACTB-202ENST00000414620 AKR1B1P15121 316 aa18.72■□□□□ 0.59
ACTB-202ENST00000414620 PLEKHH3Q7Z736 793 aa18.72■□□□□ 0.59
ACTB-202ENST00000414620 HTATIP2Q9BUP3 242 aa18.72■□□□□ 0.59
ACTB-202ENST00000414620 DCTPP1Q9H773 170 aa18.72■□□□□ 0.59
ACTB-202ENST00000414620 SWAP70Q9UH65 585 aa18.72■□□□□ 0.59
ACTB-202ENST00000414620 GREB1LQ9C091 1923 aaPredicted RBP18.72■□□□□ 0.59
ACTB-202ENST00000414620 MYH4Q9Y623 1939 aa18.72■□□□□ 0.59
ACTB-202ENST00000414620 USP17L12C9JPN9 530 aa18.71■□□□□ 0.59
ACTB-202ENST00000414620 USP17L21D6R901 530 aa18.71■□□□□ 0.59
ACTB-202ENST00000414620 ZSCAN25Q6NSZ9 544 aa18.71■□□□□ 0.59
ACTB-202ENST00000414620 TMEM179Q6ZVK1 233 aa18.71■□□□□ 0.59
ACTB-202ENST00000414620 AMOTL1Q8IY63 956 aa18.71■□□□□ 0.59
ACTB-202ENST00000414620 DIS3LQ8TF46 1054 aaKnown RBP18.71■□□□□ 0.59
ACTB-202ENST00000414620 HMX1Q9NP08 348 aaPredicted RBP18.71■□□□□ 0.59
ACTB-202ENST00000414620 COLQQ9Y215 455 aaPredicted RBP18.71■□□□□ 0.59
ACTB-202ENST00000414620 RABGAP1Q9Y3P9 1069 aa18.71■□□□□ 0.59
ACTB-202ENST00000414620 RPTORQ8N122 1335 aa18.71■□□□□ 0.59
ACTB-202ENST00000414620 ZNFX1Q9P2E3 1918 aaKnown RBP18.7■□□□□ 0.58
ACTB-202ENST00000414620 SPDYE16A6NNV3 312 aaPredicted RBP18.7■□□□□ 0.58
ACTB-202ENST00000414620 PRKAR2AP13861 404 aaKnown RBP18.7■□□□□ 0.58
ACTB-202ENST00000414620 ZKSCAN1P17029 563 aaPredicted RBP18.7■□□□□ 0.58
ACTB-202ENST00000414620 CCL14Q16627 93 aa18.7■□□□□ 0.58
ACTB-202ENST00000414620 C12orf60Q5U649 245 aa18.7■□□□□ 0.58
ACTB-202ENST00000414620 DDRGK1Q96HY6 314 aa18.7■□□□□ 0.58
ACTB-202ENST00000414620 GPATCH3Q96I76 525 aa18.7■□□□□ 0.58
ACTB-202ENST00000414620 TANGO6Q9C0B7 1094 aa18.7■□□□□ 0.58
ACTB-202ENST00000414620 CRISPLD2Q9H0B8 497 aa18.7■□□□□ 0.58
ACTB-202ENST00000414620 BTBD7Q9P203 1132 aa18.7■□□□□ 0.58
ACTB-202ENST00000414620 RGS2P41220 211 aa18.69■□□□□ 0.58
ACTB-202ENST00000414620 CDK8P49336 464 aa18.69■□□□□ 0.58
ACTB-202ENST00000414620 ICA1Q05084 483 aa18.69■□□□□ 0.58
ACTB-202ENST00000414620 KIAA1755Q5JYT7 1200 aa18.69■□□□□ 0.58
ACTB-202ENST00000414620 MORN1Q5T089 497 aa18.69■□□□□ 0.58
ACTB-202ENST00000414620 STK11IPQ8N1F8 1099 aa18.69■□□□□ 0.58
ACTB-202ENST00000414620 PAWRQ96IZ0 340 aaKnown RBP18.69■□□□□ 0.58
ACTB-202ENST00000414620 PCDHB15Q9Y5E8 787 aa18.69■□□□□ 0.58
ACTB-202ENST00000414620 ZNF236Q9UL36 1845 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms