RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 ZNF444Q8N0Y2 327 aaPredicted RBP11.66□□□□□ -0.54
DDB1-202ENST00000414411 ESR2Q92731 530 aa11.66□□□□□ -0.54
DDB1-202ENST00000414411 KLRG1Q96E93 195 aa11.66□□□□□ -0.54
DDB1-202ENST00000414411 CCDC17Q96LX7 622 aa11.66□□□□□ -0.54
DDB1-202ENST00000414411 RANBP6O60518 1105 aaKnown RBP11.66□□□□□ -0.54
DDB1-202ENST00000414411 TOMM70O94826 608 aa11.66□□□□□ -0.54
DDB1-202ENST00000414411 PSMA5P28066 241 aa11.66□□□□□ -0.54
DDB1-202ENST00000414411 AK2P54819 239 aa11.66□□□□□ -0.54
DDB1-202ENST00000414411 ANTXR2P58335 489 aa11.66□□□□□ -0.54
DDB1-202ENST00000414411 JAG1P78504 1218 aa11.66□□□□□ -0.54
DDB1-202ENST00000414411 TFAP4Q01664 338 aa11.66□□□□□ -0.54
DDB1-202ENST00000414411 MAP3K11Q16584 847 aa11.66□□□□□ -0.54
DDB1-202ENST00000414411 CERKLQ49MI3 558 aaPredicted RBP11.66□□□□□ -0.54
DDB1-202ENST00000414411 CYB5R4Q7L1T6 521 aa11.66□□□□□ -0.54
DDB1-202ENST00000414411 DHX32Q7L7V1 743 aaKnown RBP11.66□□□□□ -0.54
DDB1-202ENST00000414411 NEDD1Q8NHV4 660 aa11.66□□□□□ -0.54
DDB1-202ENST00000414411 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.66□□□□□ -0.54
DDB1-202ENST00000414411 TRIM34Q9BYJ4 488 aa11.66□□□□□ -0.54
DDB1-202ENST00000414411 ZNF341Q9BYN7 854 aa11.66□□□□□ -0.54
DDB1-202ENST00000414411 FZD1Q9UP38 647 aa11.66□□□□□ -0.54
DDB1-202ENST00000414411 PASKQ96RG2 1323 aa11.65□□□□□ -0.54
DDB1-202ENST00000414411 PRPF40AO75400 957 aaKnown RBP11.65□□□□□ -0.54
DDB1-202ENST00000414411 CPA1P15085 419 aa11.65□□□□□ -0.54
DDB1-202ENST00000414411 AKR1B1P15121 316 aa11.65□□□□□ -0.54
DDB1-202ENST00000414411 CASTP20810 708 aaKnown RBP11.65□□□□□ -0.54
DDB1-202ENST00000414411 CAP2P40123 477 aa11.65□□□□□ -0.54
DDB1-202ENST00000414411 ZNF445P59923 1031 aa11.65□□□□□ -0.54
DDB1-202ENST00000414411 FAM47AQ5JRC9 791 aa11.65□□□□□ -0.54
DDB1-202ENST00000414411 RRP12Q5JTH9 1297 aaKnown RBP11.65□□□□□ -0.54
DDB1-202ENST00000414411 RUFY3Q7L099 469 aa11.65□□□□□ -0.54
DDB1-202ENST00000414411 RALYLQ86SE5 291 aaKnown RBP11.65□□□□□ -0.54
DDB1-202ENST00000414411 RBM46Q8TBY0 533 aaKnown RBP11.65□□□□□ -0.54
DDB1-202ENST00000414411 TOMM22Q9NS69 142 aa11.65□□□□□ -0.54
DDB1-202ENST00000414411 TCP11L1Q9NUJ3 509 aa11.65□□□□□ -0.54
DDB1-202ENST00000414411 LIMCH1Q9UPQ0 1083 aa11.65□□□□□ -0.54
DDB1-202ENST00000414411 GREB1LQ9C091 1923 aaPredicted RBP11.65□□□□□ -0.54
DDB1-202ENST00000414411 WDR19Q8NEZ3 1342 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 PPP1R12BO60237 982 aaPredicted RBP11.64□□□□□ -0.55
DDB1-202ENST00000414411 CTNND1O60716 968 aaKnown RBP11.64□□□□□ -0.55
DDB1-202ENST00000414411 GUCY1A2P33402 732 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 MCM5P33992 734 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 NF2P35240 595 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 NOVP48745 357 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 NUBP1P53384 320 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 SHROOM1Q2M3G4 852 aaPredicted RBP11.64□□□□□ -0.55
DDB1-202ENST00000414411 FOXD4L5Q5VV16 416 aaPredicted RBP11.64□□□□□ -0.55
DDB1-202ENST00000414411 CST9Q5W186 159 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 CAVIN1Q6NZI2 390 aaKnown RBP11.64□□□□□ -0.55
DDB1-202ENST00000414411 BLOC1S2Q6QNY1 142 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 SMC1BQ8NDV3 1235 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 SPDYE1Q8NFV5 336 aaPredicted RBP11.64□□□□□ -0.55
DDB1-202ENST00000414411 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.64□□□□□ -0.55
DDB1-202ENST00000414411 GPT2Q8TD30 523 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 FOXD4L4Q8WXT5 416 aaPredicted RBP11.64□□□□□ -0.55
DDB1-202ENST00000414411 CHAMP1Q96JM3 812 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 IL17RBQ9NRM6 502 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 PLIN4Q96Q06 1357 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 TRPM7Q96QT4 1865 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 WDR33Q9C0J8 1336 aaKnown RBP11.64□□□□□ -0.55
DDB1-202ENST00000414411 IGKV6D-41A0A0C4DH26 115 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 TSPY3P0CV98 308 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 TSPY8P0CW00 308 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 RPS6KB1P23443 525 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 INPP5BP32019 993 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 CHST3Q7LGC8 479 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 FBXL16Q8N461 479 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 IGDCC4Q8TDY8 1250 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 MTA3Q9BTC8 594 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 ALDH8A1Q9H2A2 487 aaPredicted RBP11.64□□□□□ -0.55
DDB1-202ENST00000414411 CYP46A1Q9Y6A2 500 aa11.64□□□□□ -0.55
DDB1-202ENST00000414411 PAPPA2Q9BXP8 1791 aa11.63□□□□□ -0.55
DDB1-202ENST00000414411 TSPY2A6NKD2 308 aa11.63□□□□□ -0.55
DDB1-202ENST00000414411 PRC1O43663 620 aa11.63□□□□□ -0.55
DDB1-202ENST00000414411 NMT2O60551 498 aa11.63□□□□□ -0.55
DDB1-202ENST00000414411 GDF11O95390 407 aa11.63□□□□□ -0.55
DDB1-202ENST00000414411 MAP3K9P80192 1104 aa11.63□□□□□ -0.55
DDB1-202ENST00000414411 PDE4CQ08493 712 aa11.63□□□□□ -0.55
DDB1-202ENST00000414411 PRKG1Q13976 671 aa11.63□□□□□ -0.55
DDB1-202ENST00000414411 SEC23AQ15436 765 aa11.63□□□□□ -0.55
DDB1-202ENST00000414411 ABCB5Q2M3G0 1257 aa11.63□□□□□ -0.55
DDB1-202ENST00000414411 ZSCAN23Q3MJ62 389 aa11.63□□□□□ -0.55
DDB1-202ENST00000414411 LDLRAD1Q5T700 205 aa11.63□□□□□ -0.55
DDB1-202ENST00000414411 RCSD1Q6JBY9 416 aa11.63□□□□□ -0.55
DDB1-202ENST00000414411 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.63□□□□□ -0.55
DDB1-202ENST00000414411 ZKSCAN4Q969J2 545 aaPredicted RBP11.63□□□□□ -0.55
DDB1-202ENST00000414411 RNF25Q96BH1 459 aaPredicted RBP11.63□□□□□ -0.55
DDB1-202ENST00000414411 WRNIP1Q96S55 665 aa11.63□□□□□ -0.55
DDB1-202ENST00000414411 AGXT2Q9BYV1 514 aa11.63□□□□□ -0.55
DDB1-202ENST00000414411 GINM1Q9NU53 330 aa11.63□□□□□ -0.55
DDB1-202ENST00000414411 GH2P01242 217 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 NCLP19338 710 aaKnown RBP11.62□□□□□ -0.55
DDB1-202ENST00000414411 FKBP1BP68106 108 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 NOL9Q5SY16 702 aaKnown RBP11.62□□□□□ -0.55
DDB1-202ENST00000414411 TMEM179Q6ZVK1 233 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 MOB2Q70IA6 237 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 SIAH1Q8IUQ4 282 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 ANKS1AQ92625 1134 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 TCEANC2Q96MN5 208 aa11.62□□□□□ -0.55
DDB1-202ENST00000414411 ZSCAN10Q96SZ4 725 aaPredicted RBP11.62□□□□□ -0.55
DDB1-202ENST00000414411 ANGEL1Q9UNK9 670 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms