RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 FGRP09769 529 aa19.51■□□□□ 0.71
TSPAN4-208ENST00000409531 PSMA5P28066 241 aa19.51■□□□□ 0.71
TSPAN4-208ENST00000409531 CAP2P40123 477 aa19.51■□□□□ 0.71
TSPAN4-208ENST00000409531 CDK8P49336 464 aa19.51■□□□□ 0.71
TSPAN4-208ENST00000409531 RALYLQ86SE5 291 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-208ENST00000409531 RASEFQ8IZ41 740 aa19.51■□□□□ 0.71
TSPAN4-208ENST00000409531 NCOA7Q8NI08 942 aa19.51■□□□□ 0.71
TSPAN4-208ENST00000409531 TOMM22Q9NS69 142 aa19.51■□□□□ 0.71
TSPAN4-208ENST00000409531 HMGB1P09429 215 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-208ENST00000409531 EVX2Q03828 476 aa19.51■□□□□ 0.71
TSPAN4-208ENST00000409531 NOM1Q5C9Z4 860 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-208ENST00000409531 ZNF444Q8N0Y2 327 aaPredicted RBP19.51■□□□□ 0.71
TSPAN4-208ENST00000409531 STK11IPQ8N1F8 1099 aa19.51■□□□□ 0.71
TSPAN4-208ENST00000409531 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.51■□□□□ 0.71
TSPAN4-208ENST00000409531 SMIM22K7EJ46 135 aa19.5■□□□□ 0.71
TSPAN4-208ENST00000409531 RRP1BQ14684 758 aaKnown RBP19.5■□□□□ 0.71
TSPAN4-208ENST00000409531 TATDN1Q6P1N9 297 aa19.5■□□□□ 0.71
TSPAN4-208ENST00000409531 ESR2Q92731 530 aa19.5■□□□□ 0.71
TSPAN4-208ENST00000409531 IL17RAQ96F46 866 aa19.5■□□□□ 0.71
TSPAN4-208ENST00000409531 CCDC17Q96LX7 622 aa19.5■□□□□ 0.71
TSPAN4-208ENST00000409531 DNAJC18Q9H819 358 aa19.5■□□□□ 0.71
TSPAN4-208ENST00000409531 AFG3L2Q9Y4W6 797 aa19.5■□□□□ 0.71
TSPAN4-208ENST00000409531 GPR25O00155 361 aa19.49■□□□□ 0.71
TSPAN4-208ENST00000409531 SHMT1P34896 483 aa19.49■□□□□ 0.71
TSPAN4-208ENST00000409531 RRP12Q5JTH9 1297 aaKnown RBP19.49■□□□□ 0.71
TSPAN4-208ENST00000409531 SLC44A5Q8NCS7 719 aa19.49■□□□□ 0.71
TSPAN4-208ENST00000409531 NEK1Q96PY6 1258 aa19.49■□□□□ 0.71
TSPAN4-208ENST00000409531 TM6SF1Q9BZW5 370 aa19.49■□□□□ 0.71
TSPAN4-208ENST00000409531 R3HDMLQ9H3Y0 253 aa19.49■□□□□ 0.71
TSPAN4-208ENST00000409531 ZCCHC17Q9NP64 241 aaKnown RBP19.49■□□□□ 0.71
TSPAN4-208ENST00000409531 TAF6LQ9Y6J9 622 aa19.49■□□□□ 0.71
TSPAN4-208ENST00000409531 ATAD5Q96QE3 1844 aa19.48■□□□□ 0.71
TSPAN4-208ENST00000409531 NEDD4P46934 1319 aa19.48■□□□□ 0.71
TSPAN4-208ENST00000409531 PRDM1O75626 825 aa19.48■□□□□ 0.71
TSPAN4-208ENST00000409531 ASNSP08243 561 aa19.48■□□□□ 0.71
TSPAN4-208ENST00000409531 MLLT1Q03111 559 aaPredicted RBP19.48■□□□□ 0.71
TSPAN4-208ENST00000409531 CERKLQ49MI3 558 aaPredicted RBP19.48■□□□□ 0.71
TSPAN4-208ENST00000409531 STOX1Q6ZVD7 989 aa19.48■□□□□ 0.71
TSPAN4-208ENST00000409531 FAM43AQ8N2R8 423 aa19.48■□□□□ 0.71
TSPAN4-208ENST00000409531 JAKMIP1Q96N16 626 aaKnown RBP19.48■□□□□ 0.71
TSPAN4-208ENST00000409531 GINM1Q9NU53 330 aa19.48■□□□□ 0.71
TSPAN4-208ENST00000409531 TSPY2A6NKD2 308 aa19.47■□□□□ 0.71
TSPAN4-208ENST00000409531 USP17L5A8MUK1 530 aa19.47■□□□□ 0.71
TSPAN4-208ENST00000409531 B4E1Z4 1266 aa19.47■□□□□ 0.71
TSPAN4-208ENST00000409531 BTBD19C9JJ37 291 aa19.47■□□□□ 0.71
TSPAN4-208ENST00000409531 RANBP6O60518 1105 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-208ENST00000409531 RASA1P20936 1047 aa19.47■□□□□ 0.71
TSPAN4-208ENST00000409531 BLOC1S2Q6QNY1 142 aa19.47■□□□□ 0.71
TSPAN4-208ENST00000409531 IL27Q8NEV9 243 aa19.47■□□□□ 0.71
TSPAN4-208ENST00000409531 TBC1D2Q9BYX2 928 aa19.47■□□□□ 0.71
TSPAN4-208ENST00000409531 CASP8AP2Q9UKL3 1982 aa19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 DOCK1Q14185 1865 aa19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 KDM4AO75164 1064 aa19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 TSPY3P0CV98 308 aa19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 TSPY8P0CW00 308 aa19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 CASTP20810 708 aaKnown RBP19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 MCM5P33992 734 aa19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 CRHR2Q13324 411 aa19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 ADCK5Q3MIX3 580 aa19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 FASTKD5Q7L8L6 764 aaKnown RBP19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 CCDC84Q86UT8 332 aaPredicted RBP19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 IQCA1Q86XH1 822 aa19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 ZNF296Q8WUU4 475 aaPredicted RBP19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 ZFYVE28Q9HCC9 887 aa19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 CABP5Q9NP86 173 aa19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 INCENPQ9NQS7 918 aa19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 CYP46A1Q9Y6A2 500 aa19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 TACC3Q9Y6A5 838 aa19.46■□□□□ 0.71
TSPAN4-208ENST00000409531 A0A0G2JLL6 359 aaPredicted RBP19.45■□□□□ 0.7
TSPAN4-208ENST00000409531 JAG1P78504 1218 aa19.45■□□□□ 0.7
TSPAN4-208ENST00000409531 TFAP4Q01664 338 aa19.45■□□□□ 0.7
TSPAN4-208ENST00000409531 SPP2Q13103 211 aa19.45■□□□□ 0.7
TSPAN4-208ENST00000409531 MOGSQ13724 837 aa19.45■□□□□ 0.7
TSPAN4-208ENST00000409531 TAF1CQ15572 869 aaPredicted RBP19.45■□□□□ 0.7
TSPAN4-208ENST00000409531 CCDC178Q5BJE1 867 aa19.45■□□□□ 0.7
TSPAN4-208ENST00000409531 PPP4R3BQ5MIZ7 849 aa19.45■□□□□ 0.7
TSPAN4-208ENST00000409531 PRRT2Q7Z6L0 340 aaPredicted RBP19.45■□□□□ 0.7
TSPAN4-208ENST00000409531 ANKRD23Q86SG2 305 aa19.45■□□□□ 0.7
TSPAN4-208ENST00000409531 ZNF280CQ8ND82 737 aa19.45■□□□□ 0.7
TSPAN4-208ENST00000409531 MTA3Q9BTC8 594 aa19.45■□□□□ 0.7
TSPAN4-208ENST00000409531 AS3MTQ9HBK9 375 aa19.45■□□□□ 0.7
TSPAN4-208ENST00000409531 GREB1LQ9C091 1923 aaPredicted RBP19.45■□□□□ 0.7
TSPAN4-208ENST00000409531 WDR19Q8NEZ3 1342 aa19.45■□□□□ 0.7
TSPAN4-208ENST00000409531 PLIN4Q96Q06 1357 aa19.44■□□□□ 0.7
TSPAN4-208ENST00000409531 TRIM75PA6NK02 468 aa19.44■□□□□ 0.7
TSPAN4-208ENST00000409531 FKTNO75072 461 aa19.44■□□□□ 0.7
TSPAN4-208ENST00000409531 SART3Q15020 963 aaKnown RBP19.44■□□□□ 0.7
TSPAN4-208ENST00000409531 ABCB5Q2M3G0 1257 aa19.44■□□□□ 0.7
TSPAN4-208ENST00000409531 TMEM179Q6ZVK1 233 aa19.44■□□□□ 0.7
TSPAN4-208ENST00000409531 RUFY3Q7L099 469 aa19.44■□□□□ 0.7
TSPAN4-208ENST00000409531 DHX32Q7L7V1 743 aaKnown RBP19.44■□□□□ 0.7
TSPAN4-208ENST00000409531 MB21D2Q8IYB1 491 aaPredicted RBP19.44■□□□□ 0.7
TSPAN4-208ENST00000409531 NEDD1Q8NHV4 660 aa19.44■□□□□ 0.7
TSPAN4-208ENST00000409531 WDR18Q9BV38 432 aa19.44■□□□□ 0.7
TSPAN4-208ENST00000409531 ZSWIM6Q9HCJ5 1215 aa19.44■□□□□ 0.7
TSPAN4-208ENST00000409531 ZSWIM5Q9P217 1185 aa19.44■□□□□ 0.7
TSPAN4-208ENST00000409531 PDHXO00330 501 aa19.43■□□□□ 0.7
TSPAN4-208ENST00000409531 MPHOSPH10O00566 681 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-208ENST00000409531 GDF11O95390 407 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms