RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 MTFR1Q15390 333 aa15.99■□□□□ 0.15
SDF4-203ENST00000403997 LRRFIP1Q32MZ4 808 aaKnown RBP15.99■□□□□ 0.15
SDF4-203ENST00000403997 C12orf60Q5U649 245 aa15.99■□□□□ 0.15
SDF4-203ENST00000403997 PRPF38BQ5VTL8 546 aaKnown RBP15.99■□□□□ 0.15
SDF4-203ENST00000403997 SLAIN1Q8ND83 568 aa15.99■□□□□ 0.15
SDF4-203ENST00000403997 APPBP2Q92624 585 aa15.99■□□□□ 0.15
SDF4-203ENST00000403997 OSBP2Q969R2 916 aa15.99■□□□□ 0.15
SDF4-203ENST00000403997 MORF4L1Q9UBU8 362 aa15.99■□□□□ 0.15
SDF4-203ENST00000403997 NAV1Q8NEY1 1877 aa15.99■□□□□ 0.15
SDF4-203ENST00000403997 USP17L15C9J2P7 530 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 USP17L13C9JLJ4 530 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 USP17L11C9JVI0 530 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 USP17L18D6R9N7 530 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 USP17L22D6RA61 530 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 USP17L17D6RBQ6 530 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 USP17L19D6RCP7 530 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 USP17L20D6RJB6 530 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 SMIM22K7EJ46 135 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 CDK8P49336 464 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 UBXN2AP68543 259 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 USP17L24Q0WX57 530 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 HDAC1Q13547 482 aaPredicted RBP15.98■□□□□ 0.15
SDF4-203ENST00000403997 CTR9Q6PD62 1173 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 TMEM179Q6ZVK1 233 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 GPRC5AQ8NFJ5 357 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 PI4K2BQ8TCG2 481 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 GCC1Q96CN9 775 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 C12orf42Q96LP6 360 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 RBPJLQ9UBG7 517 aa15.98■□□□□ 0.15
SDF4-203ENST00000403997 MGAMO43451 1857 aa15.97■□□□□ 0.15
SDF4-203ENST00000403997 PEX10O60683 326 aa15.97■□□□□ 0.15
SDF4-203ENST00000403997 ELNP15502 786 aa15.97■□□□□ 0.15
SDF4-203ENST00000403997 MX1P20591 662 aa15.97■□□□□ 0.15
SDF4-203ENST00000403997 IRF5Q13568 498 aa15.97■□□□□ 0.15
SDF4-203ENST00000403997 AAMPQ13685 434 aa15.97■□□□□ 0.15
SDF4-203ENST00000403997 GTF3C2Q8WUA4 911 aaPredicted RBP15.97■□□□□ 0.15
SDF4-203ENST00000403997 CCDC17Q96LX7 622 aa15.97■□□□□ 0.15
SDF4-203ENST00000403997 PAGR1Q9BTK6 254 aa15.97■□□□□ 0.15
SDF4-203ENST00000403997 TXNRD2Q9NNW7 524 aa15.97■□□□□ 0.15
SDF4-203ENST00000403997 DDX60LQ5H9U9 1706 aaKnown RBP15.97■□□□□ 0.15
SDF4-203ENST00000403997 MYH7P12883 1935 aa15.96■□□□□ 0.15
SDF4-203ENST00000403997 DOCK3Q8IZD9 2030 aa15.96■□□□□ 0.15
SDF4-203ENST00000403997 A0A1W2PRG0 241 aa15.96■□□□□ 0.15
SDF4-203ENST00000403997 GSG1L2A8MUP6 293 aa15.96■□□□□ 0.15
SDF4-203ENST00000403997 CCL5P13501 91 aa15.96■□□□□ 0.15
SDF4-203ENST00000403997 AKR1B1P15121 316 aa15.96■□□□□ 0.15
SDF4-203ENST00000403997 VCAM1P19320 739 aa15.96■□□□□ 0.15
SDF4-203ENST00000403997 CATSPERGQ6ZRH7 1159 aa15.96■□□□□ 0.15
SDF4-203ENST00000403997 C16orf86Q6ZW13 317 aa15.96■□□□□ 0.15
SDF4-203ENST00000403997 CCAR1Q8IX12 1150 aaKnown RBP15.96■□□□□ 0.15
SDF4-203ENST00000403997 PXYLP1Q8TE99 480 aa15.96■□□□□ 0.15
SDF4-203ENST00000403997 FSD1Q9BTV5 496 aa15.96■□□□□ 0.15
SDF4-203ENST00000403997 RNF208Q9H0X6 261 aa15.96■□□□□ 0.15
SDF4-203ENST00000403997 BAZ2AQ9UIF9 1905 aaKnown RBP15.96■□□□□ 0.14
SDF4-203ENST00000403997 GPAA1O43292 621 aa15.95■□□□□ 0.14
SDF4-203ENST00000403997 APPP05067 770 aa15.95■□□□□ 0.14
SDF4-203ENST00000403997 ERVK-9P63128 1117 aa15.95■□□□□ 0.14
SDF4-203ENST00000403997 ERVK-24P63145 666 aa15.95■□□□□ 0.14
SDF4-203ENST00000403997 Q3C1V9 767 aa15.95■□□□□ 0.14
SDF4-203ENST00000403997 GIMAP6Q6P9H5 292 aa15.95■□□□□ 0.14
SDF4-203ENST00000403997 STK11IPQ8N1F8 1099 aa15.95■□□□□ 0.14
SDF4-203ENST00000403997 RPAP3Q9H6T3 665 aaPredicted RBP15.95■□□□□ 0.14
SDF4-203ENST00000403997 ARPP21Q9UBL0 812 aaPredicted RBP15.95■□□□□ 0.14
SDF4-203ENST00000403997 TNRC18O15417 2968 aaPredicted RBP15.94■□□□□ 0.14
SDF4-203ENST00000403997 MINDY4BA8MYZ0 360 aa15.94■□□□□ 0.14
SDF4-203ENST00000403997 M0R2C6 588 aa15.94■□□□□ 0.14
SDF4-203ENST00000403997 INHAP05111 366 aa15.94■□□□□ 0.14
SDF4-203ENST00000403997 GNAT2P19087 354 aa15.94■□□□□ 0.14
SDF4-203ENST00000403997 MAPK4P31152 587 aa15.94■□□□□ 0.14
SDF4-203ENST00000403997 ICA1Q05084 483 aa15.94■□□□□ 0.14
SDF4-203ENST00000403997 SBK1Q52WX2 424 aa15.94■□□□□ 0.14
SDF4-203ENST00000403997 POTEEQ6S8J3 1075 aa15.94■□□□□ 0.14
SDF4-203ENST00000403997 RWDD1Q9H446 243 aaPredicted RBP15.94■□□□□ 0.14
SDF4-203ENST00000403997 ARHGEF10LQ9HCE6 1279 aa15.94■□□□□ 0.14
SDF4-203ENST00000403997 GJD2Q9UKL4 321 aa15.94■□□□□ 0.14
SDF4-203ENST00000403997 RABGAP1Q9Y3P9 1069 aa15.94■□□□□ 0.14
SDF4-203ENST00000403997 PATL2C9JE40 543 aaKnown RBP15.93■□□□□ 0.14
SDF4-203ENST00000403997 GJB1P08034 283 aa15.93■□□□□ 0.14
SDF4-203ENST00000403997 TDO2P48775 406 aa15.93■□□□□ 0.14
SDF4-203ENST00000403997 ATP2B2Q01814 1243 aa15.93■□□□□ 0.14
SDF4-203ENST00000403997 CLEC10AQ8IUN9 316 aa15.93■□□□□ 0.14
SDF4-203ENST00000403997 SIAH1Q8IUQ4 282 aa15.93■□□□□ 0.14
SDF4-203ENST00000403997 EXOC6Q8TAG9 804 aa15.93■□□□□ 0.14
SDF4-203ENST00000403997 NKX2-3Q8TAU0 364 aa15.93■□□□□ 0.14
SDF4-203ENST00000403997 NUDT12Q9BQG2 462 aa15.93■□□□□ 0.14
SDF4-203ENST00000403997 UNC93B1Q9H1C4 597 aa15.93■□□□□ 0.14
SDF4-203ENST00000403997 MKNK2Q9HBH9 465 aa15.93■□□□□ 0.14
SDF4-203ENST00000403997 CWC22Q9HCG8 908 aaKnown RBP15.93■□□□□ 0.14
SDF4-203ENST00000403997 SALL3Q9BXA9 1300 aa15.93■□□□□ 0.14
SDF4-203ENST00000403997 BRCA2P51587 3418 aa15.93■□□□□ 0.14
SDF4-203ENST00000403997 MKI67P46013 3256 aaKnown RBP15.92■□□□□ 0.14
SDF4-203ENST00000403997 CYP2B6P20813 491 aa15.92■□□□□ 0.14
SDF4-203ENST00000403997 GJA8P48165 433 aa15.92■□□□□ 0.14
SDF4-203ENST00000403997 PDE1AP54750 535 aa15.92■□□□□ 0.14
SDF4-203ENST00000403997 CCNA1P78396 465 aa15.92■□□□□ 0.14
SDF4-203ENST00000403997 COG2Q14746 738 aa15.92■□□□□ 0.14
SDF4-203ENST00000403997 SEC62Q99442 399 aaKnown RBP15.92■□□□□ 0.14
SDF4-203ENST00000403997 TANGO6Q9C0B7 1094 aa15.92■□□□□ 0.14
SDF4-203ENST00000403997 LNPKQ9C0E8 428 aa15.92■□□□□ 0.14
SDF4-203ENST00000403997 PORCNQ9H237 461 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms