RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 PCDHAC2Q9Y5I4 1007 aa13.82□□□□□ -0.2
GTF2A2-202ENST00000396060 DDX49Q9Y6V7 483 aaKnown RBP13.82□□□□□ -0.2
GTF2A2-202ENST00000396060 TOP1P11387 765 aaKnown RBP13.81□□□□□ -0.2
GTF2A2-202ENST00000396060 SMARCA1P28370 1054 aa13.81□□□□□ -0.2
GTF2A2-202ENST00000396060 SHMT1P34896 483 aa13.81□□□□□ -0.2
GTF2A2-202ENST00000396060 GNAQP50148 359 aa13.81□□□□□ -0.2
GTF2A2-202ENST00000396060 GSE1Q14687 1217 aa13.81□□□□□ -0.2
GTF2A2-202ENST00000396060 GRM4Q14833 912 aa13.81□□□□□ -0.2
GTF2A2-202ENST00000396060 ZFPM1Q8IX07 1006 aa13.81□□□□□ -0.2
GTF2A2-202ENST00000396060 PNMA1Q8ND90 353 aa13.81□□□□□ -0.2
GTF2A2-202ENST00000396060 CTCFLQ8NI51 663 aaPredicted RBP13.81□□□□□ -0.2
GTF2A2-202ENST00000396060 PHKBQ93100 1093 aa13.81□□□□□ -0.2
GTF2A2-202ENST00000396060 TMEM47Q9BQJ4 181 aa13.81□□□□□ -0.2
GTF2A2-202ENST00000396060 RBM27Q9P2N5 1060 aaKnown RBP13.81□□□□□ -0.2
GTF2A2-202ENST00000396060 CFAP45Q9UL16 551 aa13.81□□□□□ -0.2
GTF2A2-202ENST00000396060 BCS1LQ9Y276 419 aa13.81□□□□□ -0.2
GTF2A2-202ENST00000396060 FZD9O00144 591 aa13.8□□□□□ -0.2
GTF2A2-202ENST00000396060 ZNF280AP59817 542 aaPredicted RBP13.8□□□□□ -0.2
GTF2A2-202ENST00000396060 DLGAP5Q15398 846 aa13.8□□□□□ -0.2
GTF2A2-202ENST00000396060 SLC4A8Q2Y0W8 1093 aa13.8□□□□□ -0.2
GTF2A2-202ENST00000396060 SPDYE2Q495Y8 402 aa13.8□□□□□ -0.2
GTF2A2-202ENST00000396060 KRT40Q6A162 431 aa13.8□□□□□ -0.2
GTF2A2-202ENST00000396060 TATDN1Q6P1N9 297 aa13.8□□□□□ -0.2
GTF2A2-202ENST00000396060 SH3BP5LQ7L8J4 393 aa13.8□□□□□ -0.2
GTF2A2-202ENST00000396060 KLHL34Q8N239 644 aa13.8□□□□□ -0.2
GTF2A2-202ENST00000396060 GPT2Q8TD30 523 aa13.8□□□□□ -0.2
GTF2A2-202ENST00000396060 LZTS2Q9BRK4 669 aa13.8□□□□□ -0.2
GTF2A2-202ENST00000396060 SLC26A6Q9BXS9 759 aa13.8□□□□□ -0.2
GTF2A2-202ENST00000396060 TDRD3Q9H7E2 651 aaKnown RBP13.8□□□□□ -0.2
GTF2A2-202ENST00000396060 PPP1R1BQ9UD71 204 aaPredicted RBP13.8□□□□□ -0.2
GTF2A2-202ENST00000396060 U2AF2P26368 475 aaKnown RBP eCLIP13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 UBE2HP62256 183 aa13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 KIF23Q02241 960 aaPredicted RBP13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 FAM177A1Q8N128 213 aaPredicted RBP13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 DPF2Q92785 391 aa13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 ZNF396Q96N95 335 aaPredicted RBP13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 MTMR4Q9NYA4 1195 aa13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 ZNF70Q9UC06 446 aaPredicted RBP13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 RCOR1Q9UKL0 485 aa13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 GREB1LQ9C091 1923 aaPredicted RBP13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 PALM3A6NDB9 673 aaPredicted RBP13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 DDTLA6NHG4 134 aaPredicted RBP13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 NCLP19338 710 aaKnown RBP13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 PKN1Q16512 942 aa13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 FAM83AQ86UY5 434 aa13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 SRBD1Q8N5C6 995 aaKnown RBP13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 NLGN2Q8NFZ4 835 aa13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 FAM151AQ8WW52 585 aa13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 TMOD2Q9NZR1 351 aa13.79□□□□□ -0.2
GTF2A2-202ENST00000396060 SIPA1L1O43166 1804 aa13.78□□□□□ -0.2
GTF2A2-202ENST00000396060 PPFIA3O75145 1194 aa13.78□□□□□ -0.2
GTF2A2-202ENST00000396060 AKR1B1P15121 316 aa13.78□□□□□ -0.2
GTF2A2-202ENST00000396060 GUCY1A2P33402 732 aa13.78□□□□□ -0.2
GTF2A2-202ENST00000396060 AKAP17AQ02040 695 aaKnown RBP13.78□□□□□ -0.2
GTF2A2-202ENST00000396060 TRIM29Q14134 588 aa13.78□□□□□ -0.2
GTF2A2-202ENST00000396060 FOXD4L6Q3SYB3 417 aaPredicted RBP13.78□□□□□ -0.2
GTF2A2-202ENST00000396060 OTUD7BQ6GQQ9 843 aa13.78□□□□□ -0.2
GTF2A2-202ENST00000396060 FAM173BQ6P4H8 233 aa13.78□□□□□ -0.2
GTF2A2-202ENST00000396060 FOXD4L3Q6VB84 417 aaPredicted RBP13.78□□□□□ -0.2
GTF2A2-202ENST00000396060 LEO1Q8WVC0 666 aaPredicted RBP13.78□□□□□ -0.2
GTF2A2-202ENST00000396060 MKL1Q969V6 931 aa13.78□□□□□ -0.2
GTF2A2-202ENST00000396060 CEP95Q96GE4 821 aa13.78□□□□□ -0.2
GTF2A2-202ENST00000396060 AIFM3Q96NN9 605 aa13.78□□□□□ -0.2
GTF2A2-202ENST00000396060 DNAJC18Q9H819 358 aa13.78□□□□□ -0.2
GTF2A2-202ENST00000396060 MAD2L2Q9UI95 211 aa13.78□□□□□ -0.2
GTF2A2-202ENST00000396060 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
GTF2A2-202ENST00000396060 CNTNAP5Q8WYK1 1306 aa13.77□□□□□ -0.2
GTF2A2-202ENST00000396060 TBC1D12O60347 775 aa13.77□□□□□ -0.21
GTF2A2-202ENST00000396060 GADD45BO75293 160 aaPredicted RBP13.77□□□□□ -0.21
GTF2A2-202ENST00000396060 PLEKHA8P1O95397 391 aa13.77□□□□□ -0.21
GTF2A2-202ENST00000396060 SNHG28P0DPA3 235 aa13.77□□□□□ -0.21
GTF2A2-202ENST00000396060 PRELPP51888 382 aa13.77□□□□□ -0.21
GTF2A2-202ENST00000396060 CACNB3P54284 484 aa13.77□□□□□ -0.21
GTF2A2-202ENST00000396060 GUCY1B3Q02153 619 aa13.77□□□□□ -0.21
GTF2A2-202ENST00000396060 FOXP1Q9H334 677 aaPredicted RBP13.77□□□□□ -0.21
GTF2A2-202ENST00000396060 GDPD2Q9HCC8 539 aa13.77□□□□□ -0.21
GTF2A2-202ENST00000396060 RTEL1Q9NZ71 1219 aa13.77□□□□□ -0.21
GTF2A2-202ENST00000396060 HERC5Q9UII4 1024 aaKnown RBP13.77□□□□□ -0.21
GTF2A2-202ENST00000396060 STX8Q9UNK0 236 aa13.77□□□□□ -0.21
GTF2A2-202ENST00000396060 V9GY48 417 aaPredicted RBP13.77□□□□□ -0.21
GTF2A2-202ENST00000396060 MYH8P13535 1937 aa13.76□□□□□ -0.21
GTF2A2-202ENST00000396060 FIBPO43427 364 aa13.76□□□□□ -0.21
GTF2A2-202ENST00000396060 TTLL1O95922 423 aa13.76□□□□□ -0.21
GTF2A2-202ENST00000396060 MMP1P03956 469 aa13.76□□□□□ -0.21
GTF2A2-202ENST00000396060 XBP1P17861 261 aa13.76□□□□□ -0.21
GTF2A2-202ENST00000396060 MAP3K10Q02779 954 aa13.76□□□□□ -0.21
GTF2A2-202ENST00000396060 MYSM1Q5VVJ2 828 aa13.76□□□□□ -0.21
GTF2A2-202ENST00000396060 SPATA32Q96LK8 384 aa13.76□□□□□ -0.21
GTF2A2-202ENST00000396060 SH3GLB2Q9NR46 395 aa13.76□□□□□ -0.21
GTF2A2-202ENST00000396060 TFIP11Q9UBB9 837 aaKnown RBP13.76□□□□□ -0.21
GTF2A2-202ENST00000396060 ISY1Q9ULR0 285 aaKnown RBP13.76□□□□□ -0.21
GTF2A2-202ENST00000396060 MYH15Q9Y2K3 1946 aa13.76□□□□□ -0.21
GTF2A2-202ENST00000396060 NASPP49321 788 aaPredicted RBP13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 EIF6P56537 245 aaKnown RBP13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 TCP10Q12799 353 aa13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 SAFBQ15424 915 aaKnown RBP eCLIP13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 PFKFB3Q16875 520 aaPredicted RBP13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 CMTR1Q8N1G2 835 aaKnown RBP13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 SPZ1Q9BXG8 430 aa13.75□□□□□ -0.21
GTF2A2-202ENST00000396060 MYOZ2Q9NPC6 264 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 588.8 ms