RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 AMOTL2Q9Y2J4 779 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 BZW2Q9Y6E2 419 aaKnown RBP8.8□□□□□ -1
TRPS1-203ENST00000395715 EEF1GP26641 437 aaKnown RBP8.8□□□□□ -1
TRPS1-203ENST00000395715 GDAP1L1Q96MZ0 367 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 OCM2P0CE71 109 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 OCMP0CE72 109 aaPredicted RBP8.8□□□□□ -1
TRPS1-203ENST00000395715 RFX1P22670 979 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 NECAB1Q8N987 351 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 TTLL11Q8NHH1 800 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 ALG1Q9BT22 464 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 HMG20BQ9P0W2 317 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 TLK1Q9UKI8 766 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 HMGB3O15347 200 aaKnown RBP8.8□□□□□ -1
TRPS1-203ENST00000395715 CALM1P0DP23 149 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 CALM2P0DP24 149 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 CALM3P0DP25 149 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 KSR1Q8IVT5 923 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 C6orf50Q9HD87 102 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 INTUQ9ULD6 942 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 SMARCA5O60264 1052 aaPredicted RBP8.8□□□□□ -1
TRPS1-203ENST00000395715 LMNB1P20700 586 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 MAIP1Q8WWC4 291 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 SULT6B1Q6IMI4 303 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 TRIM42Q8IWZ5 723 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 AHI1Q8N157 1196 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 ENOX1Q8TC92 643 aaKnown RBP8.8□□□□□ -1
TRPS1-203ENST00000395715 PRAM1Q96QH2 718 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 TBCCQ15814 346 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 NGLY1Q96IV0 654 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 FAM8A1Q9UBU6 413 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 THAP12O43422 761 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 PLEKHM3Q6ZWE6 761 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 ADCK1Q86TW2 530 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 THEMISQ8N1K5 641 aaPredicted RBP8.79□□□□□ -1
TRPS1-203ENST00000395715 SERPINI1Q99574 410 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 ATP6V0A4Q9HBG4 840 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 TYW1Q9NV66 732 aaKnown RBP8.79□□□□□ -1
TRPS1-203ENST00000395715 TMOD3Q9NYL9 352 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 NVLO15381 856 aaKnown RBP8.79□□□□□ -1
TRPS1-203ENST00000395715 PRDM1O75626 825 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 SLC9C1Q4G0N8 1177 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 ORC4O43929 436 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 GRIN1Q05586 938 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 CFAP70Q5T0N1 1121 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 BSPRYQ5W0U4 402 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 ATG16L1Q676U5 607 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 IQCDQ96DY2 449 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 FNBP1Q96RU3 617 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 TRIM15Q9C019 465 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 UBAP1Q9NZ09 502 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 C6orf118Q5T5N4 469 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 DTNBP1Q96EV8 351 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 ING2Q9H160 280 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 PTCD1O75127 700 aaKnown RBP8.79□□□□□ -1
TRPS1-203ENST00000395715 SERPINB10P48595 397 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 CTNND2Q9UQB3 1225 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 RAPGEF2Q9Y4G8 1499 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 ARHGAP6O43182 974 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 GPC4O75487 556 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 IL9RQ01113 521 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 PSMD2Q13200 908 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 TJAP1Q5JTD0 557 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 IFIT1BQ5T764 474 aaKnown RBP8.79□□□□□ -1
TRPS1-203ENST00000395715 SPDYE16A6NNV3 312 aaPredicted RBP8.79□□□□□ -1
TRPS1-203ENST00000395715 C6orf229H3BNL8 230 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 GRAMD1BQ3KR37 738 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 SPDYE2Q495Y8 402 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 CEP85Q6P2H3 762 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 ANKLE2Q86XL3 938 aa8.79□□□□□ -1
TRPS1-203ENST00000395715 POLA1P09884 1462 aaPredicted RBP8.78□□□□□ -1
TRPS1-203ENST00000395715 HARSP12081 509 aaKnown RBP8.78□□□□□ -1
TRPS1-203ENST00000395715 DNM1Q05193 864 aaKnown RBP8.78□□□□□ -1
TRPS1-203ENST00000395715 ART3Q13508 389 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 EP400NLQ6ZTU2 488 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 PEX26Q7Z412 305 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 GSDMAQ96QA5 445 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 OLA1Q9NTK5 396 aaKnown RBP8.78□□□□□ -1
TRPS1-203ENST00000395715 UTP6Q9NYH9 597 aaKnown RBP8.78□□□□□ -1
TRPS1-203ENST00000395715 IMPACTQ9P2X3 320 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 USTQ9Y2C2 406 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 TSPY3P0CV98 308 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 TSPY8P0CW00 308 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 TSPY1Q01534 308 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 RPS6KA1Q15418 735 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 SKAP1Q86WV1 359 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 MCF2L2Q86YR7 1114 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 WDR75Q8IWA0 830 aaKnown RBP8.78□□□□□ -1
TRPS1-203ENST00000395715 TUBB6Q9BUF5 446 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 NUP58Q9BVL2 599 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 COG4Q9H9E3 785 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.78□□□□□ -1
TRPS1-203ENST00000395715 SNX5Q9Y5X3 404 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 WIZO95785 1651 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 PPP6R3Q5H9R7 873 aaPredicted RBP8.78□□□□□ -1
TRPS1-203ENST00000395715 RBM26Q5T8P6 1007 aaKnown RBP8.78□□□□□ -1
TRPS1-203ENST00000395715 MCTP2Q6DN12 878 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 RNF169Q8NCN4 708 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 RNF217Q8TC41 542 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 CDK19Q9BWU1 502 aa8.78□□□□□ -1
TRPS1-203ENST00000395715 BIN2Q9UBW5 565 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms