RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 NEBLO76041 1014 aa9.41□□□□□ -0.9
VPS36-201ENST00000378060 KRT9P35527 623 aa9.41□□□□□ -0.9
VPS36-201ENST00000378060 CCT6AP40227 531 aaKnown RBP9.41□□□□□ -0.9
VPS36-201ENST00000378060 PKP1Q13835 747 aa9.41□□□□□ -0.9
VPS36-201ENST00000378060 BRD3Q15059 726 aa9.41□□□□□ -0.9
VPS36-201ENST00000378060 PROSER3Q2NL68 480 aa9.41□□□□□ -0.9
VPS36-201ENST00000378060 SV2BQ7L1I2 683 aa9.41□□□□□ -0.9
VPS36-201ENST00000378060 C10orf67Q8IYJ2 551 aa9.41□□□□□ -0.9
VPS36-201ENST00000378060 XPO4Q9C0E2 1151 aaKnown RBP9.41□□□□□ -0.9
VPS36-201ENST00000378060 VPS16Q9H269 839 aa9.41□□□□□ -0.9
VPS36-201ENST00000378060 MCM9Q9NXL9 1143 aa9.41□□□□□ -0.9
VPS36-201ENST00000378060 NIP7Q9Y221 180 aaKnown RBP eCLIP9.41□□□□□ -0.9
VPS36-201ENST00000378060 A0A1W2PRG0 241 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 ATP2A1O14983 1001 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 ZEB2O60315 1214 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 STAMBPO95630 424 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 PAK1Q13153 545 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 POSTNQ15063 836 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 TICAM2Q86XR7 235 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 FBF1Q8TES7 1133 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 NOC4LQ9BVI4 516 aaKnown RBP9.4□□□□□ -0.9
VPS36-201ENST00000378060 UBR2Q8IWV8 1755 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 PFKFB2O60825 505 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 ZNF174Q15697 407 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 CNNM4Q6P4Q7 775 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 TTC6Q86TZ1 520 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 CCDC26Q8TAB7 109 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 XAGE2Q96GT9 111 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 ZFP91Q96JP5 570 aaPredicted RBP9.4□□□□□ -0.9
VPS36-201ENST00000378060 E7EWF7 191 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 PUM3Q15397 648 aaKnown RBP9.4□□□□□ -0.9
VPS36-201ENST00000378060 DNAJC21Q5F1R6 531 aaKnown RBP9.4□□□□□ -0.9
VPS36-201ENST00000378060 MSL1Q68DK7 614 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 KRBA2Q6ZNG9 492 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 CCDC65Q8IXS2 484 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 MIGA1Q8NAN2 632 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 SETDB2Q96T68 719 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 NAP1L3Q99457 506 aaPredicted RBP9.4□□□□□ -0.9
VPS36-201ENST00000378060 NYXQ9GZU5 481 aa9.4□□□□□ -0.9
VPS36-201ENST00000378060 PSDA5PKW4 1024 aaPredicted RBP9.4□□□□□ -0.91
VPS36-201ENST00000378060 HELBQ8NG08 1087 aaPredicted RBP9.4□□□□□ -0.91
VPS36-201ENST00000378060 IFT81Q8WYA0 676 aa9.4□□□□□ -0.91
VPS36-201ENST00000378060 CCDC114Q96M63 670 aa9.4□□□□□ -0.91
VPS36-201ENST00000378060 ANKRD2Q9GZV1 360 aa9.4□□□□□ -0.91
VPS36-201ENST00000378060 HOMER2Q9NSB8 354 aa9.4□□□□□ -0.91
VPS36-201ENST00000378060 MKRN1Q9UHC7 482 aaKnown RBP9.4□□□□□ -0.91
VPS36-201ENST00000378060 DENND2AQ9ULE3 1009 aa9.4□□□□□ -0.91
VPS36-201ENST00000378060 CMA1P23946 247 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 ARID5AQ03989 594 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 OTUD7BQ6GQQ9 843 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 CCDC84Q86UT8 332 aaPredicted RBP9.39□□□□□ -0.91
VPS36-201ENST00000378060 TRIML1Q8N9V2 468 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 KLHDC4Q8TBB5 520 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 NHSQ6T4R5 1651 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 ATP2C2O75185 946 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 GIGYF1O75420 1035 aaPredicted RBP9.39□□□□□ -0.91
VPS36-201ENST00000378060 NR1I2O75469 434 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 TTC38Q5R3I4 469 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 ZNF804AQ7Z570 1209 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 CROCCP2Q86T23 111 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 CSGALNACT2Q8N6G5 542 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 TDRD7Q8NHU6 1098 aaKnown RBP9.39□□□□□ -0.91
VPS36-201ENST00000378060 FERMT1Q9BQL6 677 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 MTUS1Q9ULD2 1270 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 CTNND2Q9UQB3 1225 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 SAMM50Q9Y512 469 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 PTH1RQ03431 593 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 C8orf74Q6P047 294 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 LRRC8AQ8IWT6 810 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 JAKMIP2Q96AA8 810 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 USP28Q96RU2 1077 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 WWC3Q9ULE0 1092 aa9.39□□□□□ -0.91
VPS36-201ENST00000378060 A0A1W2PQ27 194 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 A0A1W2PQ64 194 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 A0A1W2PQD8 194 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 TNNI2P48788 182 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 PDE4DQ08499 809 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 PPFIA1Q13136 1202 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 PARP10Q53GL7 1025 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 POTEDQ86YR6 584 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 DNAJC10Q8IXB1 793 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 IFT20Q8IY31 132 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 MAP4K1Q92918 833 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 TPCN1Q9ULQ1 816 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 SH3TC1Q8TE82 1336 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 EFCAB8A8MWE9 144 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 TRAF5O00463 557 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 NDUFAB1O14561 156 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 MRPL12P52815 198 aaKnown RBP9.38□□□□□ -0.91
VPS36-201ENST00000378060 EAF2Q96CJ1 260 aaPredicted RBP9.38□□□□□ -0.91
VPS36-201ENST00000378060 LRRC45Q96CN5 670 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 TSKSQ9UJT2 592 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 V9GY48 417 aaPredicted RBP9.38□□□□□ -0.91
VPS36-201ENST00000378060 PALLDQ8WX93 1383 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 GOLGA6CA6NDK9 693 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 SPDYE3A6NKU9 549 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 A1BGP04217 495 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 GOLGA6DP0CG33 693 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 RFC4P35249 363 aa9.38□□□□□ -0.91
VPS36-201ENST00000378060 ATP6V1AP38606 617 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms