RNA–Protein interactions for RNA: ENST00000377798.8

POLR1E-202, Transcript of RNA polymerase I subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1E, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-202ENST00000377798 MYH6P13533 1939 aa17.21■□□□□ 0.35
POLR1E-202ENST00000377798 DICER1Q9UPY3 1922 aaKnown RBP17.21■□□□□ 0.35
POLR1E-202ENST00000377798 GREB1LQ9C091 1923 aaPredicted RBP17.2■□□□□ 0.34
POLR1E-202ENST00000377798 MYH15Q9Y2K3 1946 aa17.2■□□□□ 0.34
POLR1E-202ENST00000377798 SPDYE2Q495Y8 402 aa17.2■□□□□ 0.34
POLR1E-202ENST00000377798 NBPF11Q86T75 865 aa17.2■□□□□ 0.34
POLR1E-202ENST00000377798 CRACR2BQ8N4Y2 399 aaPredicted RBP17.2■□□□□ 0.34
POLR1E-202ENST00000377798 FBXO18Q8NFZ0 1043 aa17.2■□□□□ 0.34
POLR1E-202ENST00000377798 CTCFLQ8NI51 663 aaPredicted RBP17.2■□□□□ 0.34
POLR1E-202ENST00000377798 ALG1Q9BT22 464 aa17.2■□□□□ 0.34
POLR1E-202ENST00000377798 ZNF70Q9UC06 446 aaPredicted RBP17.2■□□□□ 0.34
POLR1E-202ENST00000377798 NOVP48745 357 aa17.2■□□□□ 0.34
POLR1E-202ENST00000377798 SKOR2Q2VWA4 1001 aaPredicted RBP17.2■□□□□ 0.34
POLR1E-202ENST00000377798 WASF1Q92558 559 aa17.2■□□□□ 0.34
POLR1E-202ENST00000377798 CEP95Q96GE4 821 aa17.2■□□□□ 0.34
POLR1E-202ENST00000377798 ZBED3Q96IU2 234 aaPredicted RBP17.2■□□□□ 0.34
POLR1E-202ENST00000377798 MAP3K14Q99558 947 aa17.2■□□□□ 0.34
POLR1E-202ENST00000377798 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.2■□□□□ 0.34
POLR1E-202ENST00000377798 DNAJC18Q9H819 358 aa17.2■□□□□ 0.34
POLR1E-202ENST00000377798 CLRN2A0PK11 232 aa17.19■□□□□ 0.34
POLR1E-202ENST00000377798 PRPF40AO75400 957 aaKnown RBP17.19■□□□□ 0.34
POLR1E-202ENST00000377798 AKR1B1P15121 316 aa17.19■□□□□ 0.34
POLR1E-202ENST00000377798 GUCY1B3Q02153 619 aa17.19■□□□□ 0.34
POLR1E-202ENST00000377798 DNM1Q05193 864 aaKnown RBP17.19■□□□□ 0.34
POLR1E-202ENST00000377798 FOXP4Q8IVH2 680 aaPredicted RBP17.19■□□□□ 0.34
POLR1E-202ENST00000377798 CMTR1Q8N1G2 835 aaKnown RBP17.19■□□□□ 0.34
POLR1E-202ENST00000377798 TMEM47Q9BQJ4 181 aa17.19■□□□□ 0.34
POLR1E-202ENST00000377798 RNF26Q9BY78 433 aaPredicted RBP17.19■□□□□ 0.34
POLR1E-202ENST00000377798 MYOZ2Q9NPC6 264 aa17.19■□□□□ 0.34
POLR1E-202ENST00000377798 CNPY2Q9Y2B0 182 aa17.19■□□□□ 0.34
POLR1E-202ENST00000377798 MYO1BO43795 1136 aa17.18■□□□□ 0.34
POLR1E-202ENST00000377798 DEXIO95424 95 aa17.18■□□□□ 0.34
POLR1E-202ENST00000377798 ZNF280AP59817 542 aaPredicted RBP17.18■□□□□ 0.34
POLR1E-202ENST00000377798 FKBP1CQ5VVH2 108 aa17.18■□□□□ 0.34
POLR1E-202ENST00000377798 TMTC3Q6ZXV5 915 aa17.18■□□□□ 0.34
POLR1E-202ENST00000377798 METTL16Q86W50 562 aaKnown RBP17.18■□□□□ 0.34
POLR1E-202ENST00000377798 CCDC82Q8N4S0 544 aa17.18■□□□□ 0.34
POLR1E-202ENST00000377798 TMEM87AQ8NBN3 555 aa17.18■□□□□ 0.34
POLR1E-202ENST00000377798 SBF1O95248 1867 aa17.18■□□□□ 0.34
POLR1E-202ENST00000377798 IGKV6D-41A0A0C4DH26 115 aa17.18■□□□□ 0.34
POLR1E-202ENST00000377798 TCP10L2B9ZVM9 353 aa17.18■□□□□ 0.34
POLR1E-202ENST00000377798 PLEKHA8P1O95397 391 aa17.18■□□□□ 0.34
POLR1E-202ENST00000377798 KIF5BP33176 963 aa17.18■□□□□ 0.34
POLR1E-202ENST00000377798 FUT2Q10981 343 aa17.18■□□□□ 0.34
POLR1E-202ENST00000377798 ARHGAP27Q6ZUM4 889 aa17.18■□□□□ 0.34
POLR1E-202ENST00000377798 DPF2Q92785 391 aa17.18■□□□□ 0.34
POLR1E-202ENST00000377798 CCDC17Q96LX7 622 aa17.18■□□□□ 0.34
POLR1E-202ENST00000377798 AIFM3Q96NN9 605 aa17.18■□□□□ 0.34
POLR1E-202ENST00000377798 SYT17Q9BSW7 474 aa17.18■□□□□ 0.34
POLR1E-202ENST00000377798 TRIM34Q9BYJ4 488 aa17.18■□□□□ 0.34
POLR1E-202ENST00000377798 WNT10BO00744 389 aa17.17■□□□□ 0.34
POLR1E-202ENST00000377798 TOP1P11387 765 aaKnown RBP17.17■□□□□ 0.34
POLR1E-202ENST00000377798 NCLP19338 710 aaKnown RBP17.17■□□□□ 0.34
POLR1E-202ENST00000377798 LMNB1P20700 586 aa17.17■□□□□ 0.34
POLR1E-202ENST00000377798 KRT85P78386 507 aa17.17■□□□□ 0.34
POLR1E-202ENST00000377798 OTUD7BQ6GQQ9 843 aa17.17■□□□□ 0.34
POLR1E-202ENST00000377798 FAM173BQ6P4H8 233 aa17.17■□□□□ 0.34
POLR1E-202ENST00000377798 FAM151AQ8WW52 585 aa17.17■□□□□ 0.34
POLR1E-202ENST00000377798 CSRNP1Q96S65 589 aa17.17■□□□□ 0.34
POLR1E-202ENST00000377798 GDPD2Q9HCC8 539 aa17.17■□□□□ 0.34
POLR1E-202ENST00000377798 MTMR4Q9NYA4 1195 aa17.17■□□□□ 0.34
POLR1E-202ENST00000377798 CNTNAP1P78357 1384 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 SHTN1A0MZ66 631 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 UBE2Q2LH0YL09 131 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 SLURP2P0DP57 97 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 GMPSP49915 693 aaPredicted RBP17.16■□□□□ 0.34
POLR1E-202ENST00000377798 AKAP17AQ02040 695 aaKnown RBP17.16■□□□□ 0.34
POLR1E-202ENST00000377798 GRM4Q14833 912 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 TATDN1Q6P1N9 297 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 VEZTQ9HBM0 779 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 GJB4Q9NTQ9 266 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 GJA3Q9Y6H8 435 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 CNTNAP5Q8WYK1 1306 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 ZNF541Q9H0D2 1346 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 FAM196BA6NMK8 535 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 FIBPO43427 364 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 GUCY1A2P33402 732 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 TRIM29Q14134 588 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 CSPP1Q1MSJ5 1256 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 NBPF9Q3BBW0 867 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 USP48Q86UV5 1035 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 FAM83AQ86UY5 434 aa17.16■□□□□ 0.34
POLR1E-202ENST00000377798 DDX49Q9Y6V7 483 aaKnown RBP17.16■□□□□ 0.34
POLR1E-202ENST00000377798 PRPF3O43395 683 aaKnown RBP17.15■□□□□ 0.34
POLR1E-202ENST00000377798 KLHL40Q2TBA0 621 aa17.15■□□□□ 0.34
POLR1E-202ENST00000377798 CERKLQ49MI3 558 aaPredicted RBP17.15■□□□□ 0.34
POLR1E-202ENST00000377798 KRT40Q6A162 431 aa17.15■□□□□ 0.34
POLR1E-202ENST00000377798 MICALL2Q8IY33 904 aa17.15■□□□□ 0.34
POLR1E-202ENST00000377798 SRBD1Q8N5C6 995 aaKnown RBP17.15■□□□□ 0.34
POLR1E-202ENST00000377798 HERC5Q9UII4 1024 aaKnown RBP17.15■□□□□ 0.34
POLR1E-202ENST00000377798 MYH4Q9Y623 1939 aa17.15■□□□□ 0.34
POLR1E-202ENST00000377798 MPHOSPH10O00566 681 aaKnown RBP17.14■□□□□ 0.33
POLR1E-202ENST00000377798 TTLL1O95922 423 aa17.14■□□□□ 0.33
POLR1E-202ENST00000377798 GNAQP50148 359 aa17.14■□□□□ 0.33
POLR1E-202ENST00000377798 PPP4R3BQ5MIZ7 849 aa17.14■□□□□ 0.33
POLR1E-202ENST00000377798 MAD2L2Q9UI95 211 aa17.14■□□□□ 0.33
POLR1E-202ENST00000377798 KIF23Q02241 960 aaPredicted RBP17.14■□□□□ 0.33
POLR1E-202ENST00000377798 CNOT7Q9UIV1 285 aaKnown RBP17.14■□□□□ 0.33
POLR1E-202ENST00000377798 PKN1Q16512 942 aa17.13■□□□□ 0.33
POLR1E-202ENST00000377798 BRAPQ7Z569 592 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms