RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 LACTBP83111 547 aaPredicted RBP11.84□□□□□ -0.51
C9orf85-202ENST00000377027 PPATQ06203 517 aa11.84□□□□□ -0.51
C9orf85-202ENST00000377027 SNAPC2Q13487 334 aa11.84□□□□□ -0.51
C9orf85-202ENST00000377027 MYSM1Q5VVJ2 828 aa11.84□□□□□ -0.51
C9orf85-202ENST00000377027 GPAT2Q6NUI2 795 aa11.84□□□□□ -0.51
C9orf85-202ENST00000377027 C17orf99Q6UX52 265 aa11.84□□□□□ -0.51
C9orf85-202ENST00000377027 RNF19BQ6ZMZ0 732 aa11.84□□□□□ -0.51
C9orf85-202ENST00000377027 SPSB2Q99619 263 aa11.84□□□□□ -0.51
C9orf85-202ENST00000377027 IDI2Q9BXS1 227 aa11.84□□□□□ -0.51
C9orf85-202ENST00000377027 ZCCHC17Q9NP64 241 aaKnown RBP11.84□□□□□ -0.51
C9orf85-202ENST00000377027 USP40Q9NVE5 1235 aa11.84□□□□□ -0.51
C9orf85-202ENST00000377027 DENND2AQ9ULE3 1009 aa11.84□□□□□ -0.51
C9orf85-202ENST00000377027 PDS5AQ29RF7 1337 aaKnown RBP11.84□□□□□ -0.51
C9orf85-202ENST00000377027 DOCK3Q8IZD9 2030 aa11.83□□□□□ -0.52
C9orf85-202ENST00000377027 SRGAP3O43295 1099 aa11.83□□□□□ -0.52
C9orf85-202ENST00000377027 RHBDL3P58872 404 aa11.83□□□□□ -0.52
C9orf85-202ENST00000377027 MAP3K10Q02779 954 aa11.83□□□□□ -0.52
C9orf85-202ENST00000377027 DCAF15Q66K64 600 aa11.83□□□□□ -0.52
C9orf85-202ENST00000377027 SH3TC2Q8TF17 1288 aa11.83□□□□□ -0.52
C9orf85-202ENST00000377027 ARHGAP45Q92619 1136 aa11.83□□□□□ -0.52
C9orf85-202ENST00000377027 XAGE2Q96GT9 111 aa11.83□□□□□ -0.52
C9orf85-202ENST00000377027 SPTLC1O15269 473 aa11.82□□□□□ -0.52
C9orf85-202ENST00000377027 ANKRD23Q86SG2 305 aa11.82□□□□□ -0.52
C9orf85-202ENST00000377027 CCDC84Q86UT8 332 aaPredicted RBP11.82□□□□□ -0.52
C9orf85-202ENST00000377027 TRIM47Q96LD4 638 aa11.82□□□□□ -0.52
C9orf85-202ENST00000377027 HMG20BQ9P0W2 317 aa11.82□□□□□ -0.52
C9orf85-202ENST00000377027 CPA4Q9UI42 421 aa11.82□□□□□ -0.52
C9orf85-202ENST00000377027 MROH7-TTC4A0A0A0MT08 1334 aa11.82□□□□□ -0.52
C9orf85-202ENST00000377027 PDHXO00330 501 aa11.81□□□□□ -0.52
C9orf85-202ENST00000377027 ENTPD3O75355 529 aa11.81□□□□□ -0.52
C9orf85-202ENST00000377027 BCRP11274 1271 aa11.81□□□□□ -0.52
C9orf85-202ENST00000377027 BTDP43251 543 aa11.81□□□□□ -0.52
C9orf85-202ENST00000377027 MECOMQ03112 1051 aa11.81□□□□□ -0.52
C9orf85-202ENST00000377027 RRP1BQ14684 758 aaKnown RBP11.81□□□□□ -0.52
C9orf85-202ENST00000377027 TBC1D9Q6ZT07 1266 aa11.81□□□□□ -0.52
C9orf85-202ENST00000377027 SHISA4Q96DD7 197 aa11.81□□□□□ -0.52
C9orf85-202ENST00000377027 HOOK2Q96ED9 719 aa11.81□□□□□ -0.52
C9orf85-202ENST00000377027 GNL3LQ9NVN8 582 aaKnown RBP11.81□□□□□ -0.52
C9orf85-202ENST00000377027 PLXNB2O15031 1838 aa11.81□□□□□ -0.52
C9orf85-202ENST00000377027 LAMA3Q16787 3333 aa11.81□□□□□ -0.52
C9orf85-202ENST00000377027 A0A0G2JLL6 359 aaPredicted RBP11.8□□□□□ -0.52
C9orf85-202ENST00000377027 FAM196BA6NMK8 535 aa11.8□□□□□ -0.52
C9orf85-202ENST00000377027 MYCP01106 439 aaPredicted RBP11.8□□□□□ -0.52
C9orf85-202ENST00000377027 GNAI3P08754 354 aa11.8□□□□□ -0.52
C9orf85-202ENST00000377027 CYP2C8P10632 490 aa11.8□□□□□ -0.52
C9orf85-202ENST00000377027 PTPRAP18433 802 aa11.8□□□□□ -0.52
C9orf85-202ENST00000377027 ARID4AP29374 1257 aaPredicted RBP11.8□□□□□ -0.52
C9orf85-202ENST00000377027 MCAMP43121 646 aa11.8□□□□□ -0.52
C9orf85-202ENST00000377027 SLC9C1Q4G0N8 1177 aa11.8□□□□□ -0.52
C9orf85-202ENST00000377027 PPP1R18Q6NYC8 613 aa11.8□□□□□ -0.52
C9orf85-202ENST00000377027 ATF7IPQ6VMQ6 1270 aa11.8□□□□□ -0.52
C9orf85-202ENST00000377027 PRRT2Q7Z6L0 340 aaPredicted RBP11.8□□□□□ -0.52
C9orf85-202ENST00000377027 TMEM57Q8N5G2 664 aa11.8□□□□□ -0.52
C9orf85-202ENST00000377027 FAM160A2Q8N612 972 aaPredicted RBP11.8□□□□□ -0.52
C9orf85-202ENST00000377027 IL27Q8NEV9 243 aa11.8□□□□□ -0.52
C9orf85-202ENST00000377027 CLUAP1Q96AJ1 413 aa11.8□□□□□ -0.52
C9orf85-202ENST00000377027 NSUN4Q96CB9 384 aaKnown RBP11.8□□□□□ -0.52
C9orf85-202ENST00000377027 ABCF2Q9UG63 623 aa11.8□□□□□ -0.52
C9orf85-202ENST00000377027 ALPK3Q96L96 1907 aa11.8□□□□□ -0.52
C9orf85-202ENST00000377027 CEP290O15078 2479 aa11.79□□□□□ -0.52
C9orf85-202ENST00000377027 COL2A1P02458 1487 aaPredicted RBP11.79□□□□□ -0.52
C9orf85-202ENST00000377027 GPR75-ASB3A0A0A6YYF3 556 aa11.79□□□□□ -0.52
C9orf85-202ENST00000377027 PICALMQ13492 652 aa11.79□□□□□ -0.52
C9orf85-202ENST00000377027 MTFR1Q15390 333 aa11.79□□□□□ -0.52
C9orf85-202ENST00000377027 DZIP1Q86YF9 867 aaKnown RBP11.79□□□□□ -0.52
C9orf85-202ENST00000377027 SCYL3Q8IZE3 742 aa11.79□□□□□ -0.52
C9orf85-202ENST00000377027 SYMPKQ92797 1274 aaKnown RBP11.79□□□□□ -0.52
C9orf85-202ENST00000377027 AFG3L2Q9Y4W6 797 aa11.79□□□□□ -0.52
C9orf85-202ENST00000377027 PCDHB15Q9Y5E8 787 aa11.79□□□□□ -0.52
C9orf85-202ENST00000377027 DDX60LQ5H9U9 1706 aaKnown RBP11.79□□□□□ -0.52
C9orf85-202ENST00000377027 RLBP1P12271 317 aa11.78□□□□□ -0.52
C9orf85-202ENST00000377027 ZGPATQ8N5A5 531 aaKnown RBP11.78□□□□□ -0.52
C9orf85-202ENST00000377027 SPATA5Q8NB90 893 aa11.78□□□□□ -0.52
C9orf85-202ENST00000377027 FRAT1Q92837 279 aaPredicted RBP11.78□□□□□ -0.52
C9orf85-202ENST00000377027 SLC6A16Q9GZN6 736 aa11.78□□□□□ -0.52
C9orf85-202ENST00000377027 LIMD1Q9UGP4 676 aa11.78□□□□□ -0.52
C9orf85-202ENST00000377027 SRRDQ9UH36 339 aa11.78□□□□□ -0.52
C9orf85-202ENST00000377027 ZHX2Q9Y6X8 837 aa11.78□□□□□ -0.52
C9orf85-202ENST00000377027 CXCL11O14625 94 aa11.77□□□□□ -0.53
C9orf85-202ENST00000377027 GNAI2P04899 355 aa11.77□□□□□ -0.53
C9orf85-202ENST00000377027 PSMC4P43686 418 aa11.77□□□□□ -0.53
C9orf85-202ENST00000377027 JAG1P78504 1218 aa11.77□□□□□ -0.53
C9orf85-202ENST00000377027 MVPQ14764 893 aaKnown RBP11.77□□□□□ -0.53
C9orf85-202ENST00000377027 SH3D19Q5HYK7 790 aa11.77□□□□□ -0.53
C9orf85-202ENST00000377027 ADGRA1Q86SQ6 560 aa11.77□□□□□ -0.53
C9orf85-202ENST00000377027 NEUROD6Q96NK8 337 aa11.77□□□□□ -0.53
C9orf85-202ENST00000377027 USB1Q9BQ65 265 aaKnown RBP11.77□□□□□ -0.53
C9orf85-202ENST00000377027 C1orf115Q9H7X2 142 aa11.77□□□□□ -0.53
C9orf85-202ENST00000377027 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.77□□□□□ -0.53
C9orf85-202ENST00000377027 POLR3EQ9NVU0 708 aa11.77□□□□□ -0.53
C9orf85-202ENST00000377027 GABRQQ9UN88 632 aa11.77□□□□□ -0.53
C9orf85-202ENST00000377027 AKAP2Q9Y2D5 859 aa11.77□□□□□ -0.53
C9orf85-202ENST00000377027 DNAH12Q6ZR08 3092 aa11.77□□□□□ -0.53
C9orf85-202ENST00000377027 MYH1P12882 1939 aa11.76□□□□□ -0.53
C9orf85-202ENST00000377027 S1PR4O95977 384 aa11.76□□□□□ -0.53
C9orf85-202ENST00000377027 PRKCZQ05513 592 aa11.76□□□□□ -0.53
C9orf85-202ENST00000377027 SKIV2LQ15477 1246 aaKnown RBP11.76□□□□□ -0.53
C9orf85-202ENST00000377027 SHROOM1Q2M3G4 852 aaPredicted RBP11.76□□□□□ -0.53
C9orf85-202ENST00000377027 TREML2Q5T2D2 321 aa11.76□□□□□ -0.53
C9orf85-202ENST00000377027 ERICH6Q7L0X2 663 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms