RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 USP17L17D6RBQ6 530 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 USP17L19D6RCP7 530 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 USP17L20D6RJB6 530 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 MBD4O95243 580 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 CYP2D6P10635 497 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 ERVK-9P63128 1117 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 ERVK-24P63145 666 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 USP17L24Q0WX57 530 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 SEPT2Q15019 361 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 UBE3CQ15386 1083 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 POTEEQ6S8J3 1075 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 GTF3C2Q8WUA4 911 aaPredicted RBP17.18■□□□□ 0.34
NELFE-201ENST00000375425 PAGR1Q9BTK6 254 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 DCTPP1Q9H773 170 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 ATP8A2Q9NTI2 1148 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 DOCK3Q8IZD9 2030 aa17.18■□□□□ 0.34
NELFE-201ENST00000375425 MPHOSPH10O00566 681 aaKnown RBP17.17■□□□□ 0.34
NELFE-201ENST00000375425 TFRCP02786 760 aaKnown RBP17.17■□□□□ 0.34
NELFE-201ENST00000375425 CATSPERGQ6ZRH7 1159 aa17.17■□□□□ 0.34
NELFE-201ENST00000375425 UBE2Q1Q7Z7E8 422 aa17.17■□□□□ 0.34
NELFE-201ENST00000375425 DPF3Q92784 378 aa17.17■□□□□ 0.34
NELFE-201ENST00000375425 DEFB118Q96PH6 123 aa17.17■□□□□ 0.34
NELFE-201ENST00000375425 PAK6Q9NQU5 681 aaPredicted RBP17.17■□□□□ 0.34
NELFE-201ENST00000375425 VCAM1P19320 739 aa17.16■□□□□ 0.34
NELFE-201ENST00000375425 CYP2B6P20813 491 aa17.16■□□□□ 0.34
NELFE-201ENST00000375425 MAPK4P31152 587 aa17.16■□□□□ 0.34
NELFE-201ENST00000375425 ZSCAN25Q6NSZ9 544 aa17.16■□□□□ 0.34
NELFE-201ENST00000375425 SLC44A5Q8NCS7 719 aa17.16■□□□□ 0.34
NELFE-201ENST00000375425 DYNLL2Q96FJ2 89 aa17.16■□□□□ 0.34
NELFE-201ENST00000375425 NUDT12Q9BQG2 462 aa17.16■□□□□ 0.34
NELFE-201ENST00000375425 ECHDC1Q9NTX5 307 aa17.16■□□□□ 0.34
NELFE-201ENST00000375425 SWAP70Q9UH65 585 aa17.16■□□□□ 0.34
NELFE-201ENST00000375425 A0A1W2PRG0 241 aa17.15■□□□□ 0.34
NELFE-201ENST00000375425 HMGCRP04035 888 aa17.15■□□□□ 0.34
NELFE-201ENST00000375425 TRIM32Q13049 653 aa17.15■□□□□ 0.34
NELFE-201ENST00000375425 CCAR1Q8IX12 1150 aaKnown RBP17.15■□□□□ 0.34
NELFE-201ENST00000375425 PUS7LQ9H0K6 701 aaKnown RBP17.15■□□□□ 0.34
NELFE-201ENST00000375425 PORCNQ9H237 461 aa17.15■□□□□ 0.34
NELFE-201ENST00000375425 RABGAP1Q9Y3P9 1069 aa17.15■□□□□ 0.34
NELFE-201ENST00000375425 H0YGN5 161 aa17.14■□□□□ 0.33
NELFE-201ENST00000375425 HABP4Q5JVS0 413 aaKnown RBP17.14■□□□□ 0.33
NELFE-201ENST00000375425 GPR142Q7Z601 462 aa17.14■□□□□ 0.33
NELFE-201ENST00000375425 RPAP3Q9H6T3 665 aaPredicted RBP17.14■□□□□ 0.33
NELFE-201ENST00000375425 SLC4A4Q9Y6R1 1079 aa17.14■□□□□ 0.33
NELFE-201ENST00000375425 CYP2D7A0A087X1C5 515 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 USP17L12C9JPN9 530 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 USP17L21D6R901 530 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 SMIM22K7EJ46 135 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 CNMDO75829 334 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 FARP2O94887 1054 aaPredicted RBP17.13■□□□□ 0.33
NELFE-201ENST00000375425 XRCC5P13010 732 aaKnown RBP17.13■□□□□ 0.33
NELFE-201ENST00000375425 CAPN2P17655 700 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 C12orf60Q5U649 245 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 TMEM179Q6ZVK1 233 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 SOCS4Q8WXH5 440 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 TRIB2Q92519 343 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.13■□□□□ 0.33
NELFE-201ENST00000375425 HMX1Q9NP08 348 aaPredicted RBP17.13■□□□□ 0.33
NELFE-201ENST00000375425 PCDHB15Q9Y5E8 787 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 AKR1B1P15121 316 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 TSHZ3Q63HK5 1081 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 PLEKHH3Q7Z736 793 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 AMOTL1Q8IY63 956 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 USP6NLQ92738 828 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 DDRGK1Q96HY6 314 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 GPATCH3Q96I76 525 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 HTATIP2Q9BUP3 242 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 CRISPLD2Q9H0B8 497 aa17.13■□□□□ 0.33
NELFE-201ENST00000375425 RPTORQ8N122 1335 aa17.12■□□□□ 0.33
NELFE-201ENST00000375425 RANBP2P49792 3224 aaKnown RBP17.12■□□□□ 0.33
NELFE-201ENST00000375425 CDK8P49336 464 aa17.12■□□□□ 0.33
NELFE-201ENST00000375425 CCNA1P78396 465 aa17.12■□□□□ 0.33
NELFE-201ENST00000375425 MORN1Q5T089 497 aa17.12■□□□□ 0.33
NELFE-201ENST00000375425 CTR9Q6PD62 1173 aa17.12■□□□□ 0.33
NELFE-201ENST00000375425 LBX2Q6XYB7 198 aa17.12■□□□□ 0.33
NELFE-201ENST00000375425 SIAH1Q8IUQ4 282 aa17.12■□□□□ 0.33
NELFE-201ENST00000375425 CWC22Q9HCG8 908 aaKnown RBP17.12■□□□□ 0.33
NELFE-201ENST00000375425 BTBD7Q9P203 1132 aa17.12■□□□□ 0.33
NELFE-201ENST00000375425 COLQQ9Y215 455 aaPredicted RBP17.12■□□□□ 0.33
NELFE-201ENST00000375425 SPDYE16A6NNV3 312 aaPredicted RBP17.11■□□□□ 0.33
NELFE-201ENST00000375425 RGS2P41220 211 aa17.11■□□□□ 0.33
NELFE-201ENST00000375425 COG2Q14746 738 aa17.11■□□□□ 0.33
NELFE-201ENST00000375425 KBTBD3Q8NAB2 608 aa17.11■□□□□ 0.33
NELFE-201ENST00000375425 CCDC17Q96LX7 622 aa17.11■□□□□ 0.33
NELFE-201ENST00000375425 STRBPQ96SI9 672 aaKnown RBP17.11■□□□□ 0.33
NELFE-201ENST00000375425 HOXC10Q9NYD6 342 aa17.11■□□□□ 0.33
NELFE-201ENST00000375425 DDX60LQ5H9U9 1706 aaKnown RBP17.1■□□□□ 0.33
NELFE-201ENST00000375425 KIAA1755Q5JYT7 1200 aa17.1■□□□□ 0.33
NELFE-201ENST00000375425 WDR78Q5VTH9 848 aa17.1■□□□□ 0.33
NELFE-201ENST00000375425 C16orf86Q6ZW13 317 aa17.1■□□□□ 0.33
NELFE-201ENST00000375425 TRMT44Q8IYL2 757 aaKnown RBP17.1■□□□□ 0.33
NELFE-201ENST00000375425 OSBP2Q969R2 916 aa17.1■□□□□ 0.33
NELFE-201ENST00000375425 PAWRQ96IZ0 340 aaKnown RBP17.1■□□□□ 0.33
NELFE-201ENST00000375425 NAV1Q8NEY1 1877 aa17.09■□□□□ 0.33
NELFE-201ENST00000375425 RNF113AO15541 343 aaKnown RBP17.09■□□□□ 0.33
NELFE-201ENST00000375425 GLRX3O76003 335 aaKnown RBP17.09■□□□□ 0.33
NELFE-201ENST00000375425 PRKAR2AP13861 404 aaKnown RBP17.09■□□□□ 0.33
NELFE-201ENST00000375425 ZKSCAN1P17029 563 aaPredicted RBP17.09■□□□□ 0.33
NELFE-201ENST00000375425 ICA1Q05084 483 aa17.09■□□□□ 0.33
NELFE-201ENST00000375425 MAP2K5Q13163 448 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms