RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 CCNA1P78396 465 aa22.72■■□□□ 1.23
TMEM53-201ENST00000372235 AAMPQ13685 434 aa22.72■■□□□ 1.23
TMEM53-201ENST00000372235 TRMT44Q8IYL2 757 aaKnown RBP22.72■■□□□ 1.23
TMEM53-201ENST00000372235 SOCS4Q8WXH5 440 aa22.72■■□□□ 1.23
TMEM53-201ENST00000372235 SH2D4AQ9H788 454 aa22.72■■□□□ 1.23
TMEM53-201ENST00000372235 DDX60LQ5H9U9 1706 aaKnown RBP22.71■■□□□ 1.23
TMEM53-201ENST00000372235 MPHOSPH10O00566 681 aaKnown RBP22.71■■□□□ 1.23
TMEM53-201ENST00000372235 MTFR1Q15390 333 aa22.71■■□□□ 1.23
TMEM53-201ENST00000372235 KBTBD3Q8NAB2 608 aa22.71■■□□□ 1.23
TMEM53-201ENST00000372235 GLRX3O76003 335 aaKnown RBP22.7■■□□□ 1.22
TMEM53-201ENST00000372235 GIMAP6Q6P9H5 292 aa22.7■■□□□ 1.22
TMEM53-201ENST00000372235 NUDT12Q9BQG2 462 aa22.7■■□□□ 1.22
TMEM53-201ENST00000372235 ARPP21Q9UBL0 812 aaPredicted RBP22.7■■□□□ 1.22
TMEM53-201ENST00000372235 RABGAP1Q9Y3P9 1069 aa22.7■■□□□ 1.22
TMEM53-201ENST00000372235 SLC4A4Q9Y6R1 1079 aa22.7■■□□□ 1.22
TMEM53-201ENST00000372235 KIAA0100Q14667 2235 aaKnown RBP22.69■■□□□ 1.22
TMEM53-201ENST00000372235 INHAP05111 366 aa22.69■■□□□ 1.22
TMEM53-201ENST00000372235 GNAT2P19087 354 aa22.69■■□□□ 1.22
TMEM53-201ENST00000372235 ERVK-9P63128 1117 aa22.69■■□□□ 1.22
TMEM53-201ENST00000372235 ERVK-24P63145 666 aa22.69■■□□□ 1.22
TMEM53-201ENST00000372235 SHROOM1Q2M3G4 852 aaPredicted RBP22.69■■□□□ 1.22
TMEM53-201ENST00000372235 C12orf60Q5U649 245 aa22.69■■□□□ 1.22
TMEM53-201ENST00000372235 CATSPERGQ6ZRH7 1159 aa22.69■■□□□ 1.22
TMEM53-201ENST00000372235 ARHGEF10LQ9HCE6 1279 aa22.69■■□□□ 1.22
TMEM53-201ENST00000372235 CWC22Q9HCG8 908 aaKnown RBP22.69■■□□□ 1.22
TMEM53-201ENST00000372235 PDE4DIPQ5VU43 2346 aa22.69■■□□□ 1.22
TMEM53-201ENST00000372235 TNRC18O15417 2968 aaPredicted RBP22.68■■□□□ 1.22
TMEM53-201ENST00000372235 HMGCRP04035 888 aa22.68■■□□□ 1.22
TMEM53-201ENST00000372235 XRCC5P13010 732 aaKnown RBP22.68■■□□□ 1.22
TMEM53-201ENST00000372235 VCAM1P19320 739 aa22.68■■□□□ 1.22
TMEM53-201ENST00000372235 ZYXQ15942 572 aaKnown RBP22.68■■□□□ 1.22
TMEM53-201ENST00000372235 LBX2Q6XYB7 198 aa22.68■■□□□ 1.22
TMEM53-201ENST00000372235 APPBP2Q92624 585 aa22.68■■□□□ 1.22
TMEM53-201ENST00000372235 LPAR1Q92633 364 aa22.68■■□□□ 1.22
TMEM53-201ENST00000372235 RBPJLQ9UBG7 517 aa22.68■■□□□ 1.22
TMEM53-201ENST00000372235 SGPL1O95470 568 aa22.67■■□□□ 1.22
TMEM53-201ENST00000372235 SEPT2Q15019 361 aa22.67■■□□□ 1.22
TMEM53-201ENST00000372235 U2AF1L4Q8WU68 220 aaKnown RBP22.67■■□□□ 1.22
TMEM53-201ENST00000372235 HTATIP2Q9BUP3 242 aa22.67■■□□□ 1.22
TMEM53-201ENST00000372235 ZNF287Q9HBT7 754 aa22.67■■□□□ 1.22
TMEM53-201ENST00000372235 HOXC10Q9NYD6 342 aa22.67■■□□□ 1.22
TMEM53-201ENST00000372235 GJD2Q9UKL4 321 aa22.67■■□□□ 1.22
TMEM53-201ENST00000372235 MYH7P12883 1935 aa22.67■■□□□ 1.22
TMEM53-201ENST00000372235 CENPFP49454 3210 aa22.66■■□□□ 1.22
TMEM53-201ENST00000372235 USP17L12C9JPN9 530 aa22.66■■□□□ 1.22
TMEM53-201ENST00000372235 USP17L21D6R901 530 aa22.66■■□□□ 1.22
TMEM53-201ENST00000372235 RNF113AO15541 343 aaKnown RBP22.66■■□□□ 1.22
TMEM53-201ENST00000372235 PRKAB2O43741 272 aa22.66■■□□□ 1.22
TMEM53-201ENST00000372235 ELNP15502 786 aa22.66■■□□□ 1.22
TMEM53-201ENST00000372235 C16orf86Q6ZW13 317 aa22.66■■□□□ 1.22
TMEM53-201ENST00000372235 PUS7LQ9H0K6 701 aaKnown RBP22.66■■□□□ 1.22
TMEM53-201ENST00000372235 PCDHB15Q9Y5E8 787 aa22.66■■□□□ 1.22
TMEM53-201ENST00000372235 GUCY1A2P33402 732 aa22.65■■□□□ 1.22
TMEM53-201ENST00000372235 ACER1Q8TDN7 264 aa22.65■■□□□ 1.22
TMEM53-201ENST00000372235 STRBPQ96SI9 672 aaKnown RBP22.65■■□□□ 1.22
TMEM53-201ENST00000372235 PAGR1Q9BTK6 254 aa22.65■■□□□ 1.22
TMEM53-201ENST00000372235 UNC93B1Q9H1C4 597 aa22.65■■□□□ 1.22
TMEM53-201ENST00000372235 RPAP3Q9H6T3 665 aaPredicted RBP22.65■■□□□ 1.22
TMEM53-201ENST00000372235 TXNRD2Q9NNW7 524 aa22.65■■□□□ 1.22
TMEM53-201ENST00000372235 RGS2P41220 211 aa22.64■■□□□ 1.21
TMEM53-201ENST00000372235 CDK8P49336 464 aa22.64■■□□□ 1.21
TMEM53-201ENST00000372235 ICA1Q05084 483 aa22.64■■□□□ 1.21
TMEM53-201ENST00000372235 COG2Q14746 738 aa22.64■■□□□ 1.21
TMEM53-201ENST00000372235 SBK1Q52WX2 424 aa22.64■■□□□ 1.21
TMEM53-201ENST00000372235 PLEKHH3Q7Z736 793 aa22.64■■□□□ 1.21
TMEM53-201ENST00000372235 KANSL2Q9H9L4 492 aa22.64■■□□□ 1.21
TMEM53-201ENST00000372235 PAK6Q9NQU5 681 aaPredicted RBP22.64■■□□□ 1.21
TMEM53-201ENST00000372235 RPTORQ8N122 1335 aa22.63■■□□□ 1.21
TMEM53-201ENST00000372235 TFRCP02786 760 aaKnown RBP22.63■■□□□ 1.21
TMEM53-201ENST00000372235 CYP2D6P10635 497 aa22.63■■□□□ 1.21
TMEM53-201ENST00000372235 CTR9Q6PD62 1173 aa22.63■■□□□ 1.21
TMEM53-201ENST00000372235 GPR142Q7Z601 462 aa22.63■■□□□ 1.21
TMEM53-201ENST00000372235 MB21D1Q8N884 522 aa22.63■■□□□ 1.21
TMEM53-201ENST00000372235 SHISA4Q96DD7 197 aa22.63■■□□□ 1.21
TMEM53-201ENST00000372235 DYNLL2Q96FJ2 89 aa22.63■■□□□ 1.21
TMEM53-201ENST00000372235 HMX1Q9NP08 348 aaPredicted RBP22.63■■□□□ 1.21
TMEM53-201ENST00000372235 TMX2Q9Y320 296 aa22.63■■□□□ 1.21
TMEM53-201ENST00000372235 IVNS1ABPQ9Y6Y0 642 aa22.63■■□□□ 1.21
TMEM53-201ENST00000372235 MX1P20591 662 aa22.62■■□□□ 1.21
TMEM53-201ENST00000372235 Q3C1V9 767 aa22.62■■□□□ 1.21
TMEM53-201ENST00000372235 NACAP1Q9BZK3 213 aa22.62■■□□□ 1.21
TMEM53-201ENST00000372235 HDAC1Q13547 482 aaPredicted RBP22.61■■□□□ 1.21
TMEM53-201ENST00000372235 SLFNL1Q499Z3 407 aa22.61■■□□□ 1.21
TMEM53-201ENST00000372235 TICAM2Q86XR7 235 aa22.61■■□□□ 1.21
TMEM53-201ENST00000372235 ANKLE1Q8NAG6 615 aa22.61■■□□□ 1.21
TMEM53-201ENST00000372235 SLC44A5Q8NCS7 719 aa22.61■■□□□ 1.21
TMEM53-201ENST00000372235 TANGO6Q9C0B7 1094 aa22.61■■□□□ 1.21
TMEM53-201ENST00000372235 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.61■■□□□ 1.21
TMEM53-201ENST00000372235 MKNK2Q9HBH9 465 aa22.61■■□□□ 1.21
TMEM53-201ENST00000372235 FARP2O94887 1054 aaPredicted RBP22.6■■□□□ 1.21
TMEM53-201ENST00000372235 AKR1B1P15121 316 aa22.6■■□□□ 1.21
TMEM53-201ENST00000372235 ZKSCAN1P17029 563 aaPredicted RBP22.6■■□□□ 1.21
TMEM53-201ENST00000372235 CYP2B6P20813 491 aa22.6■■□□□ 1.21
TMEM53-201ENST00000372235 DEFB118Q96PH6 123 aa22.6■■□□□ 1.21
TMEM53-201ENST00000372235 APBA2Q99767 749 aa22.6■■□□□ 1.21
TMEM53-201ENST00000372235 VCPKMTQ9H867 229 aa22.6■■□□□ 1.21
TMEM53-201ENST00000372235 GOPCQ9HD26 462 aa22.6■■□□□ 1.21
TMEM53-201ENST00000372235 MYH8P13535 1937 aa22.59■■□□□ 1.21
TMEM53-201ENST00000372235 A0A1W2PRG0 241 aa22.59■■□□□ 1.21
TMEM53-201ENST00000372235 SLC15A5A6NIM6 579 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms