RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 ICA1Q05084 483 aa18.35■□□□□ 0.53
PRPF38B-202ENST00000370022 SNAPC2Q13487 334 aa18.35■□□□□ 0.53
PRPF38B-202ENST00000370022 FAM47AQ5JRC9 791 aa18.35■□□□□ 0.53
PRPF38B-202ENST00000370022 RALYLQ86SE5 291 aaKnown RBP18.35■□□□□ 0.53
PRPF38B-202ENST00000370022 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.35■□□□□ 0.53
PRPF38B-202ENST00000370022 TCP11L1Q9NUJ3 509 aa18.35■□□□□ 0.53
PRPF38B-202ENST00000370022 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.35■□□□□ 0.53
PRPF38B-202ENST00000370022 IGKV6D-41A0A0C4DH26 115 aa18.34■□□□□ 0.53
PRPF38B-202ENST00000370022 MANSC4A6NHS7 340 aaPredicted RBP18.34■□□□□ 0.53
PRPF38B-202ENST00000370022 GRM1Q13255 1194 aa18.34■□□□□ 0.53
PRPF38B-202ENST00000370022 SH2D4AQ9H788 454 aa18.34■□□□□ 0.53
PRPF38B-202ENST00000370022 ARHGEF10LQ9HCE6 1279 aa18.34■□□□□ 0.53
PRPF38B-202ENST00000370022 GREB1LQ9C091 1923 aaPredicted RBP18.34■□□□□ 0.53
PRPF38B-202ENST00000370022 B4E1Z4 1266 aa18.34■□□□□ 0.53
PRPF38B-202ENST00000370022 C19orf81C9J6K1 198 aa18.34■□□□□ 0.53
PRPF38B-202ENST00000370022 USP17L10C9JJH3 530 aa18.34■□□□□ 0.53
PRPF38B-202ENST00000370022 KDM4AO75164 1064 aa18.34■□□□□ 0.53
PRPF38B-202ENST00000370022 CETPP11597 493 aa18.34■□□□□ 0.53
PRPF38B-202ENST00000370022 SREBF2Q12772 1141 aa18.34■□□□□ 0.53
PRPF38B-202ENST00000370022 SPP2Q13103 211 aa18.34■□□□□ 0.53
PRPF38B-202ENST00000370022 CCDC178Q5BJE1 867 aa18.34■□□□□ 0.53
PRPF38B-202ENST00000370022 IQCA1Q86XH1 822 aa18.34■□□□□ 0.53
PRPF38B-202ENST00000370022 MTMR4Q9NYA4 1195 aa18.34■□□□□ 0.53
PRPF38B-202ENST00000370022 NYAP2Q9P242 653 aa18.34■□□□□ 0.53
PRPF38B-202ENST00000370022 SYNPO2Q9UMS6 1093 aa18.34■□□□□ 0.53
PRPF38B-202ENST00000370022 TRIM75PA6NK02 468 aa18.33■□□□□ 0.52
PRPF38B-202ENST00000370022 TTLL1O95922 423 aa18.33■□□□□ 0.52
PRPF38B-202ENST00000370022 USP14P54578 494 aa18.33■□□□□ 0.52
PRPF38B-202ENST00000370022 BACE1P56817 501 aa18.33■□□□□ 0.52
PRPF38B-202ENST00000370022 MKRN3Q13064 507 aaKnown RBP18.33■□□□□ 0.52
PRPF38B-202ENST00000370022 STOX1Q6ZVD7 989 aa18.33■□□□□ 0.52
PRPF38B-202ENST00000370022 CCDC84Q86UT8 332 aaPredicted RBP18.33■□□□□ 0.52
PRPF38B-202ENST00000370022 CEP95Q96GE4 821 aa18.33■□□□□ 0.52
PRPF38B-202ENST00000370022 MS4A4AQ96JQ5 239 aa18.33■□□□□ 0.52
PRPF38B-202ENST00000370022 ZSWIM5Q9P217 1185 aa18.33■□□□□ 0.52
PRPF38B-202ENST00000370022 TAF6LQ9Y6J9 622 aa18.33■□□□□ 0.52
PRPF38B-202ENST00000370022 A0A0G2JLL6 359 aaPredicted RBP18.32■□□□□ 0.52
PRPF38B-202ENST00000370022 TESPA1A2RU30 521 aaPredicted RBP18.32■□□□□ 0.52
PRPF38B-202ENST00000370022 SH3D19Q5HYK7 790 aa18.32■□□□□ 0.52
PRPF38B-202ENST00000370022 FASTKD5Q7L8L6 764 aaKnown RBP18.32■□□□□ 0.52
PRPF38B-202ENST00000370022 PRRT2Q7Z6L0 340 aaPredicted RBP18.32■□□□□ 0.52
PRPF38B-202ENST00000370022 DNAJC5GQ8N7S2 189 aa18.32■□□□□ 0.52
PRPF38B-202ENST00000370022 TTC14Q96N46 770 aa18.32■□□□□ 0.52
PRPF38B-202ENST00000370022 KIAA1683Q9H0B3 1180 aa18.32■□□□□ 0.52
PRPF38B-202ENST00000370022 PHIPQ8WWQ0 1821 aa18.32■□□□□ 0.52
PRPF38B-202ENST00000370022 THSD7BQ9C0I4 1608 aa18.31■□□□□ 0.52
PRPF38B-202ENST00000370022 SEC24BO95487 1268 aa18.31■□□□□ 0.52
PRPF38B-202ENST00000370022 EEF2P13639 858 aaKnown RBP18.31■□□□□ 0.52
PRPF38B-202ENST00000370022 NOVP48745 357 aa18.31■□□□□ 0.52
PRPF38B-202ENST00000370022 KIF23Q02241 960 aaPredicted RBP18.31■□□□□ 0.52
PRPF38B-202ENST00000370022 MTMR2Q13614 643 aa18.31■□□□□ 0.52
PRPF38B-202ENST00000370022 RASEFQ8IZ41 740 aa18.31■□□□□ 0.52
PRPF38B-202ENST00000370022 MKL1Q969V6 931 aa18.31■□□□□ 0.52
PRPF38B-202ENST00000370022 FEZ1Q99689 392 aa18.31■□□□□ 0.52
PRPF38B-202ENST00000370022 MTA3Q9BTC8 594 aa18.31■□□□□ 0.52
PRPF38B-202ENST00000370022 IL17RBQ9NRM6 502 aa18.31■□□□□ 0.52
PRPF38B-202ENST00000370022 TMX2Q9Y320 296 aa18.31■□□□□ 0.52
PRPF38B-202ENST00000370022 CCL15-CCL14A0A0B4J2E2 113 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 AOC2O75106 756 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 HMGB1P09429 215 aaKnown RBP18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 CCL15Q16663 113 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 USP17L2Q6R6M4 530 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 DGKHQ86XP1 1220 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 SIAH1Q8IUQ4 282 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 PROCA1Q8NCQ7 364 aaPredicted RBP18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 NEK1Q96PY6 1258 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 UBAC1Q9BSL1 405 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 TMOD4Q9NZQ9 345 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 SNX14Q9Y5W7 946 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 A0A1W2PRG0 241 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 PSMA5P28066 241 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 MCM5P33992 734 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 TM4SF4P48230 202 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 ANAPC15P60006 121 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 ATP2B2Q01814 1243 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 MB21D2Q8IYB1 491 aaPredicted RBP18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 ACER1Q8TDN7 264 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 C12orf42Q96LP6 360 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 ZSCAN10Q96SZ4 725 aaPredicted RBP18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 UPF2Q9HAU5 1272 aaKnown RBP18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 CLIP2Q9UDT6 1046 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 STX8Q9UNK0 236 aa18.3■□□□□ 0.52
PRPF38B-202ENST00000370022 HMGCS2P54868 508 aa18.29■□□□□ 0.52
PRPF38B-202ENST00000370022 SART3Q15020 963 aaKnown RBP18.29■□□□□ 0.52
PRPF38B-202ENST00000370022 OTUD7BQ6GQQ9 843 aa18.29■□□□□ 0.52
PRPF38B-202ENST00000370022 CLEC10AQ8IUN9 316 aa18.29■□□□□ 0.52
PRPF38B-202ENST00000370022 BRI3BPQ8WY22 251 aa18.29■□□□□ 0.52
PRPF38B-202ENST00000370022 LPAR1Q92633 364 aa18.29■□□□□ 0.52
PRPF38B-202ENST00000370022 GOPCQ9HD26 462 aa18.29■□□□□ 0.52
PRPF38B-202ENST00000370022 WDR19Q8NEZ3 1342 aa18.28■□□□□ 0.52
PRPF38B-202ENST00000370022 ERICH2A1L162 156 aa18.28■□□□□ 0.52
PRPF38B-202ENST00000370022 NMT2O60551 498 aa18.28■□□□□ 0.52
PRPF38B-202ENST00000370022 NKX2-3Q8TAU0 364 aa18.28■□□□□ 0.52
PRPF38B-202ENST00000370022 ANKS1AQ92625 1134 aa18.28■□□□□ 0.52
PRPF38B-202ENST00000370022 VCPKMTQ9H867 229 aa18.28■□□□□ 0.52
PRPF38B-202ENST00000370022 ZCCHC17Q9NP64 241 aaKnown RBP18.28■□□□□ 0.52
PRPF38B-202ENST00000370022 TOP1P11387 765 aaKnown RBP18.27■□□□□ 0.52
PRPF38B-202ENST00000370022 MOGSQ13724 837 aa18.27■□□□□ 0.52
PRPF38B-202ENST00000370022 ADCK5Q3MIX3 580 aa18.27■□□□□ 0.52
PRPF38B-202ENST00000370022 CYB5R4Q7L1T6 521 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms