RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 RIPOR2Q9Y4F9 1068 aa11.49□□□□□ -0.57
PTPRA-203ENST00000356147 SRPRBQ9Y5M8 271 aaKnown RBP11.49□□□□□ -0.57
PTPRA-203ENST00000356147 IFNAR1P17181 557 aa11.49□□□□□ -0.57
PTPRA-203ENST00000356147 KRT9P35527 623 aa11.49□□□□□ -0.57
PTPRA-203ENST00000356147 KRT31Q15323 416 aa11.49□□□□□ -0.57
PTPRA-203ENST00000356147 NT5DC1Q5TFE4 455 aa11.49□□□□□ -0.57
PTPRA-203ENST00000356147 RRAGBQ5VZM2 374 aa11.49□□□□□ -0.57
PTPRA-203ENST00000356147 NAPGQ99747 312 aaPredicted RBP11.49□□□□□ -0.57
PTPRA-203ENST00000356147 TBC1D2BQ9UPU7 963 aa11.49□□□□□ -0.57
PTPRA-203ENST00000356147 USP54Q70EL1 1684 aa11.48□□□□□ -0.57
PTPRA-203ENST00000356147 ERLIN1O75477 346 aa11.48□□□□□ -0.57
PTPRA-203ENST00000356147 ARHGAP25P42331 645 aa11.48□□□□□ -0.57
PTPRA-203ENST00000356147 CUL4BQ13620 913 aa11.48□□□□□ -0.57
PTPRA-203ENST00000356147 RASGRP2Q7LDG7 609 aa11.48□□□□□ -0.57
PTPRA-203ENST00000356147 LCORLQ8N3X6 602 aa11.48□□□□□ -0.57
PTPRA-203ENST00000356147 SDR42E1Q8WUS8 393 aa11.48□□□□□ -0.57
PTPRA-203ENST00000356147 MYO5AQ9Y4I1 1855 aaKnown RBP11.48□□□□□ -0.57
PTPRA-203ENST00000356147 CYP2D7A0A087X1C5 515 aa11.48□□□□□ -0.57
PTPRA-203ENST00000356147 PPP1R3GB7ZBB8 358 aa11.48□□□□□ -0.57
PTPRA-203ENST00000356147 FILIP1LQ4L180 1135 aa11.48□□□□□ -0.57
PTPRA-203ENST00000356147 SGMS1Q86VZ5 419 aa11.48□□□□□ -0.57
PTPRA-203ENST00000356147 DNAJC10Q8IXB1 793 aa11.48□□□□□ -0.57
PTPRA-203ENST00000356147 CRACR2BQ8N4Y2 399 aaPredicted RBP11.48□□□□□ -0.57
PTPRA-203ENST00000356147 PLIN2Q99541 437 aa11.48□□□□□ -0.57
PTPRA-203ENST00000356147 ISCA1Q9BUE6 129 aa11.48□□□□□ -0.57
PTPRA-203ENST00000356147 STRN4Q9NRL3 753 aa11.48□□□□□ -0.57
PTPRA-203ENST00000356147 TRIM49BA6NDI0 452 aa11.47□□□□□ -0.57
PTPRA-203ENST00000356147 SLC20A2Q08357 652 aa11.47□□□□□ -0.57
PTPRA-203ENST00000356147 AKNAD1Q5T1N1 836 aa11.47□□□□□ -0.57
PTPRA-203ENST00000356147 MSANTD4Q8NCY6 345 aa11.47□□□□□ -0.57
PTPRA-203ENST00000356147 IPO4Q8TEX9 1081 aaKnown RBP11.47□□□□□ -0.57
PTPRA-203ENST00000356147 ABHD10Q9NUJ1 306 aa11.47□□□□□ -0.57
PTPRA-203ENST00000356147 RAB21Q9UL25 225 aa11.47□□□□□ -0.57
PTPRA-203ENST00000356147 MYO6Q9UM54 1294 aa11.47□□□□□ -0.57
PTPRA-203ENST00000356147 SLC4A4Q9Y6R1 1079 aa11.47□□□□□ -0.57
PTPRA-203ENST00000356147 SCN11AQ9UI33 1791 aa11.47□□□□□ -0.57
PTPRA-203ENST00000356147 TRIM75PA6NK02 468 aa11.47□□□□□ -0.57
PTPRA-203ENST00000356147 ADAMTS3O15072 1205 aa11.47□□□□□ -0.57
PTPRA-203ENST00000356147 EIF3JO75822 258 aaKnown RBP11.47□□□□□ -0.57
PTPRA-203ENST00000356147 ERCC5P28715 1186 aaPredicted RBP11.47□□□□□ -0.57
PTPRA-203ENST00000356147 LRRC31Q6UY01 552 aa11.47□□□□□ -0.57
PTPRA-203ENST00000356147 TOM1L2Q6ZVM7 507 aa11.47□□□□□ -0.57
PTPRA-203ENST00000356147 POLD4Q9HCU8 107 aa11.47□□□□□ -0.57
PTPRA-203ENST00000356147 GDAQ9Y2T3 454 aa11.47□□□□□ -0.57
PTPRA-203ENST00000356147 V9GY48 417 aaPredicted RBP11.47□□□□□ -0.57
PTPRA-203ENST00000356147 KAT6BQ8WYB5 2073 aa11.47□□□□□ -0.57
PTPRA-203ENST00000356147 RIC1Q4ADV7 1423 aa11.47□□□□□ -0.57
PTPRA-203ENST00000356147 MYH8P13535 1937 aa11.47□□□□□ -0.57
PTPRA-203ENST00000356147 TCRBV5S4A2TA0A5A2 114 aa11.46□□□□□ -0.57
PTPRA-203ENST00000356147 GSG1L2A8MUP6 293 aa11.46□□□□□ -0.57
PTPRA-203ENST00000356147 ZNF185O15231 689 aa11.46□□□□□ -0.57
PTPRA-203ENST00000356147 MYO1BO43795 1136 aa11.46□□□□□ -0.57
PTPRA-203ENST00000356147 RNF40O75150 1001 aa11.46□□□□□ -0.57
PTPRA-203ENST00000356147 PBX1P40424 430 aa11.46□□□□□ -0.57
PTPRA-203ENST00000356147 PPARDQ03181 441 aa11.46□□□□□ -0.57
PTPRA-203ENST00000356147 SLC4A8Q2Y0W8 1093 aa11.46□□□□□ -0.57
PTPRA-203ENST00000356147 TTC19Q6DKK2 380 aaPredicted RBP11.46□□□□□ -0.57
PTPRA-203ENST00000356147 ZNF654Q8IZM8 581 aa11.46□□□□□ -0.57
PTPRA-203ENST00000356147 FANCBQ8NB91 859 aa11.46□□□□□ -0.57
PTPRA-203ENST00000356147 MMS19Q96T76 1030 aa11.46□□□□□ -0.57
PTPRA-203ENST00000356147 EHD4Q9H223 541 aa11.46□□□□□ -0.57
PTPRA-203ENST00000356147 WDR19Q8NEZ3 1342 aa11.46□□□□□ -0.57
PTPRA-203ENST00000356147 PLEKHA8P1O95397 391 aa11.46□□□□□ -0.57
PTPRA-203ENST00000356147 ATP1A1P05023 1023 aaKnown RBP11.46□□□□□ -0.57
PTPRA-203ENST00000356147 VEGFAP15692 232 aaPredicted RBP11.46□□□□□ -0.57
PTPRA-203ENST00000356147 CDKAL1Q5VV42 579 aa11.46□□□□□ -0.57
PTPRA-203ENST00000356147 TSPYL1Q9H0U9 437 aa11.46□□□□□ -0.57
PTPRA-203ENST00000356147 REXO2Q9Y3B8 237 aaKnown RBP11.46□□□□□ -0.57
PTPRA-203ENST00000356147 ERICH2A1L162 156 aa11.46□□□□□ -0.58
PTPRA-203ENST00000356147 EIF3CLB5ME19 914 aaKnown RBP11.46□□□□□ -0.58
PTPRA-203ENST00000356147 PATL2C9JE40 543 aaKnown RBP11.46□□□□□ -0.58
PTPRA-203ENST00000356147 DEXIO95424 95 aa11.46□□□□□ -0.58
PTPRA-203ENST00000356147 LIFRP42702 1097 aa11.46□□□□□ -0.58
PTPRA-203ENST00000356147 EVX2Q03828 476 aa11.46□□□□□ -0.58
PTPRA-203ENST00000356147 UBXN1Q04323 297 aa11.46□□□□□ -0.58
PTPRA-203ENST00000356147 RASGRF1Q13972 1273 aa11.46□□□□□ -0.58
PTPRA-203ENST00000356147 UBE3CQ15386 1083 aa11.46□□□□□ -0.58
PTPRA-203ENST00000356147 PACS2Q86VP3 889 aa11.46□□□□□ -0.58
PTPRA-203ENST00000356147 CNGA4Q8IV77 575 aa11.46□□□□□ -0.58
PTPRA-203ENST00000356147 HNRNPLLQ8WVV9 542 aaKnown RBP11.46□□□□□ -0.58
PTPRA-203ENST00000356147 EIF3CQ99613 913 aaKnown RBP11.46□□□□□ -0.58
PTPRA-203ENST00000356147 FOXP1Q9H334 677 aaPredicted RBP11.46□□□□□ -0.58
PTPRA-203ENST00000356147 MYBL2P10244 700 aa11.45□□□□□ -0.58
PTPRA-203ENST00000356147 USP5P45974 858 aa11.45□□□□□ -0.58
PTPRA-203ENST00000356147 DNAJC21Q5F1R6 531 aaKnown RBP11.45□□□□□ -0.58
PTPRA-203ENST00000356147 TRIML1Q8N9V2 468 aa11.45□□□□□ -0.58
PTPRA-203ENST00000356147 SPATA20Q8TB22 786 aa11.45□□□□□ -0.58
PTPRA-203ENST00000356147 WASF1Q92558 559 aa11.45□□□□□ -0.58
PTPRA-203ENST00000356147 PSMB7Q99436 277 aa11.45□□□□□ -0.58
PTPRA-203ENST00000356147 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.45□□□□□ -0.584e-7■■□□□ 13.3
PTPRA-203ENST00000356147 ASAP1Q9ULH1 1129 aa11.45□□□□□ -0.58
PTPRA-203ENST00000356147 DUSP10Q9Y6W6 482 aa11.45□□□□□ -0.58
PTPRA-203ENST00000356147 ANKRD18BA2A2Z9 1011 aa11.45□□□□□ -0.58
PTPRA-203ENST00000356147 PDE8BO95263 885 aa11.45□□□□□ -0.58
PTPRA-203ENST00000356147 MCM7P33993 719 aa11.45□□□□□ -0.58
PTPRA-203ENST00000356147 COPB1P53618 953 aaKnown RBP11.45□□□□□ -0.58
PTPRA-203ENST00000356147 PTGDRQ13258 359 aa11.45□□□□□ -0.58
PTPRA-203ENST00000356147 ZCRB1Q8TBF4 217 aaKnown RBP11.45□□□□□ -0.58
PTPRA-203ENST00000356147 DRC1Q96MC2 740 aa11.45□□□□□ -0.58
PTPRA-203ENST00000356147 UBAC1Q9BSL1 405 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms