RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 RAB34Q9BZG1 259 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 SYNCQ9H7C4 482 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 SPINK5Q9NQ38 1064 aaPredicted RBP5.56□□□□□ -1.52
SKP1-202ENST00000353411 ZFYVE16Q7Z3T8 1539 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 IQCA1LA6NCM1 817 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 MYSM1Q5VVJ2 828 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 TBC1D1Q86TI0 1168 aaPredicted RBP5.56□□□□□ -1.52
SKP1-202ENST00000353411 TRIML1Q8N9V2 468 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 GGNBP2Q9H3C7 697 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 ZNF711Q9Y462 761 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 NUTM2BA6NNL0 878 aaPredicted RBP5.56□□□□□ -1.52
SKP1-202ENST00000353411 NUTM2EB1AL46 878 aaPredicted RBP5.56□□□□□ -1.52
SKP1-202ENST00000353411 IARSP41252 1262 aaKnown RBP5.56□□□□□ -1.52
SKP1-202ENST00000353411 CTCFP49711 727 aaPredicted RBP5.56□□□□□ -1.52
SKP1-202ENST00000353411 PSEN1P49768 467 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 CCDC93Q567U6 631 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 FAM133BQ5BKY9 247 aaKnown RBP5.56□□□□□ -1.52
SKP1-202ENST00000353411 HS2ST1Q7LGA3 356 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 SCAF11Q99590 1463 aaKnown RBP5.56□□□□□ -1.52
SKP1-202ENST00000353411 BPIFA3Q9BQP9 254 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 DESI2Q9BSY9 194 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 DRC3Q9H069 523 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 NDC80O14777 642 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 CUTAO60888 179 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 PDHA1P08559 390 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 MRPS25P82663 173 aaKnown RBP5.56□□□□□ -1.52
SKP1-202ENST00000353411 TAF7Q15545 349 aaPredicted RBP5.56□□□□□ -1.52
SKP1-202ENST00000353411 NYAP1Q6ZVC0 841 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 CEP70Q8NHQ1 597 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 OPTNQ96CV9 577 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 VCPKMTQ9H867 229 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 A1CFQ9NQ94 594 aaKnown RBP5.56□□□□□ -1.52
SKP1-202ENST00000353411 MTMR6Q9Y217 621 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 CPP00450 1065 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 VWA3BQ502W6 1294 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 EIF2AQ9BY44 585 aaKnown RBP5.56□□□□□ -1.52
SKP1-202ENST00000353411 PARVBQ9HBI1 364 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 PDP2Q9P2J9 529 aa5.56□□□□□ -1.52
SKP1-202ENST00000353411 MAFGO15525 162 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 TOM1O60784 492 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 PDE6CP51160 858 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 PDCLQ13371 301 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 CYB5D1Q6P9G0 228 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 CDC37L1Q7L3B6 337 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 RIC3Q7Z5B4 369 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 SYCE1Q8N0S2 351 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 SLC40A1Q9NP59 571 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 CD2BP2O95400 341 aaKnown RBP5.55□□□□□ -1.52
SKP1-202ENST00000353411 GPTP24298 496 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 GUCY2FP51841 1108 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 NOP14P78316 857 aaKnown RBP5.55□□□□□ -1.52
SKP1-202ENST00000353411 PREPLQ4J6C6 727 aaPredicted RBP5.55□□□□□ -1.52
SKP1-202ENST00000353411 CREB3L3Q68CJ9 461 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 Q6ZUG5 572 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 OR8K1Q8NGG5 319 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 HIC2Q96JB3 615 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 RUNDC3BQ96NL0 473 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 SLF1Q9BQI6 1058 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 EXOC1Q9NV70 894 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 TRPC6Q9Y210 931 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 DISP3Q9P2K9 1392 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 ZBTB7BO15156 539 aaPredicted RBP5.55□□□□□ -1.52
SKP1-202ENST00000353411 MARCKSP29966 332 aaPredicted RBP5.55□□□□□ -1.52
SKP1-202ENST00000353411 LMNB2Q03252 620 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 SLC4A8Q2Y0W8 1093 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 HDGFL1Q5TGJ6 251 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 LRRC31Q6UY01 552 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 ARHGEF25Q86VW2 580 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 SLC35F6Q8N357 371 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 ZCRB1Q8TBF4 217 aaKnown RBP5.55□□□□□ -1.52
SKP1-202ENST00000353411 CD248Q9HCU0 757 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 STRN4Q9NRL3 753 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 NUB1Q9Y5A7 615 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 PFKFB2O60825 505 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 LMNB1P20700 586 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 ROR2Q01974 943 aaKnown RBP5.55□□□□□ -1.52
SKP1-202ENST00000353411 ATP6V0A1Q93050 837 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 IFIH1Q9BYX4 1025 aaKnown RBP5.55□□□□□ -1.52
SKP1-202ENST00000353411 KRT23Q9C075 422 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 MAN1A2O60476 641 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 NSMCE1Q8WV22 266 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 TEKT4Q8WW24 435 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 SLC12A7Q9Y666 1083 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 TARBP1Q13395 1621 aaKnown RBP5.55□□□□□ -1.52
SKP1-202ENST00000353411 KRT75O95678 551 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 CCT6AP40227 531 aaKnown RBP5.55□□□□□ -1.52
SKP1-202ENST00000353411 CUL1Q13616 776 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 VSTM4Q8IW00 320 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 SYCP3Q8IZU3 236 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 FAM167BQ9BTA0 163 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 ZFATQ9P243 1243 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 SERPINA10Q9UK55 444 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 KCNH3Q9ULD8 1083 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 MAP3K5Q99683 1374 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 TBC1D8O95759 1140 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 PRR16Q569H4 304 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 CEP85Q6P2H3 762 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 PTPDC1A2A3K4 754 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 E7ENQ6 273 aa5.55□□□□□ -1.52
SKP1-202ENST00000353411 DCTN3O75935 186 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms