RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 C19orf81C9J6K1 198 aa18.3■□□□□ 0.52
PRKN-201ENST00000338468 USP17L10C9JJH3 530 aa18.3■□□□□ 0.52
PRKN-201ENST00000338468 FOXP2O15409 715 aa18.3■□□□□ 0.52
PRKN-201ENST00000338468 CDK8P49336 464 aa18.3■□□□□ 0.52
PRKN-201ENST00000338468 SEPT2Q15019 361 aa18.3■□□□□ 0.52
PRKN-201ENST00000338468 RAB3GAP1Q15042 981 aa18.3■□□□□ 0.52
PRKN-201ENST00000338468 ARPP21Q9UBL0 812 aaPredicted RBP18.3■□□□□ 0.52
PRKN-201ENST00000338468 COLQQ9Y215 455 aaPredicted RBP18.3■□□□□ 0.52
PRKN-201ENST00000338468 AKR1B1P15121 316 aa18.29■□□□□ 0.52
PRKN-201ENST00000338468 GNAT2P19087 354 aa18.29■□□□□ 0.52
PRKN-201ENST00000338468 PDE4AP27815 886 aa18.29■□□□□ 0.52
PRKN-201ENST00000338468 CCDC129Q6ZRS4 1044 aa18.29■□□□□ 0.52
PRKN-201ENST00000338468 DDRGK1Q96HY6 314 aa18.29■□□□□ 0.52
PRKN-201ENST00000338468 CABP5Q9NP86 173 aa18.29■□□□□ 0.52
PRKN-201ENST00000338468 CEP290O15078 2479 aa18.29■□□□□ 0.52
PRKN-201ENST00000338468 MYH8P13535 1937 aa18.28■□□□□ 0.52
PRKN-201ENST00000338468 PATL2C9JE40 543 aaKnown RBP18.28■□□□□ 0.52
PRKN-201ENST00000338468 HOXA7P31268 230 aaPredicted RBP18.28■□□□□ 0.52
PRKN-201ENST00000338468 KIF22Q14807 665 aa18.28■□□□□ 0.52
PRKN-201ENST00000338468 SIAH1Q8IUQ4 282 aa18.28■□□□□ 0.52
PRKN-201ENST00000338468 IFNL3Q8IZI9 196 aa18.28■□□□□ 0.52
PRKN-201ENST00000338468 TRIM47Q96LD4 638 aa18.28■□□□□ 0.52
PRKN-201ENST00000338468 KIAA1683Q9H0B3 1180 aa18.28■□□□□ 0.52
PRKN-201ENST00000338468 ASCC2Q9H1I8 757 aaPredicted RBP18.28■□□□□ 0.52
PRKN-201ENST00000338468 TMOD4Q9NZQ9 345 aa18.28■□□□□ 0.52
PRKN-201ENST00000338468 ROBO3Q96MS0 1386 aa18.28■□□□□ 0.52
PRKN-201ENST00000338468 A0A1W2PRG0 241 aa18.27■□□□□ 0.52
PRKN-201ENST00000338468 MPHOSPH10O00566 681 aaKnown RBP18.27■□□□□ 0.52
PRKN-201ENST00000338468 ECM2O94769 699 aaPredicted RBP18.27■□□□□ 0.52
PRKN-201ENST00000338468 MYCP01106 439 aaPredicted RBP18.27■□□□□ 0.52
PRKN-201ENST00000338468 USP17L2Q6R6M4 530 aa18.27■□□□□ 0.52
PRKN-201ENST00000338468 CLEC10AQ8IUN9 316 aa18.27■□□□□ 0.52
PRKN-201ENST00000338468 AMOTL1Q8IY63 956 aa18.27■□□□□ 0.52
PRKN-201ENST00000338468 C12orf42Q96LP6 360 aa18.27■□□□□ 0.52
PRKN-201ENST00000338468 FAM227BQ96M60 508 aa18.27■□□□□ 0.52
PRKN-201ENST00000338468 A0A0D9SFI3 127 aa18.26■□□□□ 0.51
PRKN-201ENST00000338468 MINDY4BA8MYZ0 360 aa18.26■□□□□ 0.51
PRKN-201ENST00000338468 ZYXQ15942 572 aaKnown RBP18.26■□□□□ 0.51
PRKN-201ENST00000338468 VPS53Q5VIR6 699 aa18.26■□□□□ 0.51
PRKN-201ENST00000338468 POTEEQ6S8J3 1075 aa18.26■□□□□ 0.51
PRKN-201ENST00000338468 TMEM179Q6ZVK1 233 aa18.26■□□□□ 0.51
PRKN-201ENST00000338468 TICAM2Q86XR7 235 aa18.26■□□□□ 0.51
PRKN-201ENST00000338468 SMCR8Q8TEV9 937 aaPredicted RBP18.26■□□□□ 0.51
PRKN-201ENST00000338468 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.26■□□□□ 0.516e-17■■■■■ 149.9
PRKN-201ENST00000338468 PNMA3Q9UL41 463 aa18.26■□□□□ 0.51
PRKN-201ENST00000338468 TRIOBPQ9H2D6 2365 aa18.25■□□□□ 0.51
PRKN-201ENST00000338468 TRIM6-TRIM34B2RNG4 842 aa18.25■□□□□ 0.51
PRKN-201ENST00000338468 H0YGN5 161 aa18.25■□□□□ 0.51
PRKN-201ENST00000338468 GNRH1P01148 92 aa18.25■□□□□ 0.51
PRKN-201ENST00000338468 APPP05067 770 aa18.25■□□□□ 0.51
PRKN-201ENST00000338468 OSBPP22059 807 aa18.25■□□□□ 0.51
PRKN-201ENST00000338468 PSMC4P43686 418 aa18.25■□□□□ 0.51
PRKN-201ENST00000338468 TDO2P48775 406 aa18.25■□□□□ 0.51
PRKN-201ENST00000338468 PABPC4Q13310 644 aaKnown RBP eCLIP18.25■□□□□ 0.51
PRKN-201ENST00000338468 SH3TC2Q8TF17 1288 aa18.25■□□□□ 0.51
PRKN-201ENST00000338468 CCDC17Q96LX7 622 aa18.25■□□□□ 0.51
PRKN-201ENST00000338468 P2RX7Q99572 595 aaKnown RBP18.25■□□□□ 0.51
PRKN-201ENST00000338468 FEZ1Q99689 392 aa18.25■□□□□ 0.51
PRKN-201ENST00000338468 HELLSQ9NRZ9 838 aa18.25■□□□□ 0.51
PRKN-201ENST00000338468 GREB1LQ9C091 1923 aaPredicted RBP18.25■□□□□ 0.51
PRKN-201ENST00000338468 RASA1P20936 1047 aa18.24■□□□□ 0.51
PRKN-201ENST00000338468 NMIQ13287 307 aaPredicted RBP18.24■□□□□ 0.51
PRKN-201ENST00000338468 KIAA1755Q5JYT7 1200 aa18.24■□□□□ 0.51
PRKN-201ENST00000338468 STK11IPQ8N1F8 1099 aa18.24■□□□□ 0.51
PRKN-201ENST00000338468 ANKRD13CQ8N6S4 541 aa18.24■□□□□ 0.51
PRKN-201ENST00000338468 RILPL2Q969X0 211 aa18.24■□□□□ 0.51
PRKN-201ENST00000338468 MGAMO43451 1857 aa18.24■□□□□ 0.51
PRKN-201ENST00000338468 PEX10O60683 326 aa18.23■□□□□ 0.51
PRKN-201ENST00000338468 VCAM1P19320 739 aa18.23■□□□□ 0.51
PRKN-201ENST00000338468 GCLCP48506 637 aaPredicted RBP18.23■□□□□ 0.51
PRKN-201ENST00000338468 USP14P54578 494 aa18.23■□□□□ 0.51
PRKN-201ENST00000338468 PRMT2P55345 433 aa18.23■□□□□ 0.51
PRKN-201ENST00000338468 FAM110CQ1W6H9 321 aa18.23■□□□□ 0.51
PRKN-201ENST00000338468 ZNF589Q86UQ0 364 aaPredicted RBP18.23■□□□□ 0.51
PRKN-201ENST00000338468 FMNL1O95466 1100 aaPredicted RBP18.22■□□□□ 0.51
PRKN-201ENST00000338468 SDSP20132 328 aa18.22■□□□□ 0.51
PRKN-201ENST00000338468 HERVK_113P62684 666 aa18.22■□□□□ 0.51
PRKN-201ENST00000338468 IRX3P78415 501 aaPredicted RBP18.22■□□□□ 0.51
PRKN-201ENST00000338468 ICA1Q05084 483 aa18.22■□□□□ 0.51
PRKN-201ENST00000338468 MCMDC2Q4G0Z9 681 aa18.22■□□□□ 0.51
PRKN-201ENST00000338468 NACAP1Q9BZK3 213 aa18.22■□□□□ 0.51
PRKN-201ENST00000338468 TXNRD2Q9NNW7 524 aa18.22■□□□□ 0.51
PRKN-201ENST00000338468 MORF4L1Q9UBU8 362 aa18.22■□□□□ 0.51
PRKN-201ENST00000338468 SRRDQ9UH36 339 aa18.22■□□□□ 0.51
PRKN-201ENST00000338468 TMX2Q9Y320 296 aa18.22■□□□□ 0.51
PRKN-201ENST00000338468 GSPT1P15170 499 aaKnown RBP18.21■□□□□ 0.51
PRKN-201ENST00000338468 FCGRTP55899 365 aa18.21■□□□□ 0.51
PRKN-201ENST00000338468 PPARAQ07869 468 aa18.21■□□□□ 0.51
PRKN-201ENST00000338468 CATSPERGQ6ZRH7 1159 aa18.21■□□□□ 0.51
PRKN-201ENST00000338468 NAPBQ9H115 298 aa18.21■□□□□ 0.51
PRKN-201ENST00000338468 RBPJLQ9UBG7 517 aa18.21■□□□□ 0.51
PRKN-201ENST00000338468 TACC3Q9Y6A5 838 aa18.21■□□□□ 0.51
PRKN-201ENST00000338468 IGKV6D-41A0A0C4DH26 115 aa18.2■□□□□ 0.5
PRKN-201ENST00000338468 USP17L15C9J2P7 530 aa18.2■□□□□ 0.5
PRKN-201ENST00000338468 USP17L13C9JLJ4 530 aa18.2■□□□□ 0.5
PRKN-201ENST00000338468 USP17L11C9JVI0 530 aa18.2■□□□□ 0.5
PRKN-201ENST00000338468 USP17L18D6R9N7 530 aa18.2■□□□□ 0.5
PRKN-201ENST00000338468 USP17L22D6RA61 530 aa18.2■□□□□ 0.5
PRKN-201ENST00000338468 USP17L17D6RBQ6 530 aa18.2■□□□□ 0.5
PRKN-201ENST00000338468 USP17L19D6RCP7 530 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms