RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 TXNRD2Q9NNW7 524 aa21.38■■□□□ 1.01
HDDC3-201ENST00000330334 PCDHB15Q9Y5E8 787 aa21.38■■□□□ 1.01
HDDC3-201ENST00000330334 PRKAB2O43741 272 aa21.37■■□□□ 1.01
HDDC3-201ENST00000330334 INHAP05111 366 aa21.37■■□□□ 1.01
HDDC3-201ENST00000330334 ELNP15502 786 aa21.37■■□□□ 1.01
HDDC3-201ENST00000330334 MAPK4P31152 587 aa21.37■■□□□ 1.01
HDDC3-201ENST00000330334 RRP1P56182 461 aaKnown RBP21.37■■□□□ 1.01
HDDC3-201ENST00000330334 C12orf60Q5U649 245 aa21.37■■□□□ 1.01
HDDC3-201ENST00000330334 LBX2Q6XYB7 198 aa21.37■■□□□ 1.01
HDDC3-201ENST00000330334 CATSPERGQ6ZRH7 1159 aa21.37■■□□□ 1.01
HDDC3-201ENST00000330334 KBTBD3Q8NAB2 608 aa21.37■■□□□ 1.01
HDDC3-201ENST00000330334 ACER1Q8TDN7 264 aa21.37■■□□□ 1.01
HDDC3-201ENST00000330334 DDRGK1Q96HY6 314 aa21.37■■□□□ 1.01
HDDC3-201ENST00000330334 RABGAP1Q9Y3P9 1069 aa21.37■■□□□ 1.01
HDDC3-201ENST00000330334 VCAM1P19320 739 aa21.36■■□□□ 1.01
HDDC3-201ENST00000330334 ERVK-9P63128 1117 aa21.36■■□□□ 1.01
HDDC3-201ENST00000330334 ERVK-24P63145 666 aa21.36■■□□□ 1.01
HDDC3-201ENST00000330334 SEPT2Q15019 361 aa21.36■■□□□ 1.01
HDDC3-201ENST00000330334 POTEEQ6S8J3 1075 aa21.36■■□□□ 1.01
HDDC3-201ENST00000330334 TMEM179Q6ZVK1 233 aa21.36■■□□□ 1.01
HDDC3-201ENST00000330334 UBE2Q1Q7Z7E8 422 aa21.36■■□□□ 1.01
HDDC3-201ENST00000330334 AMOTL1Q8IY63 956 aa21.36■■□□□ 1.01
HDDC3-201ENST00000330334 CCDC17Q96LX7 622 aa21.36■■□□□ 1.01
HDDC3-201ENST00000330334 PUS7LQ9H0K6 701 aaKnown RBP21.36■■□□□ 1.01
HDDC3-201ENST00000330334 UNC93B1Q9H1C4 597 aa21.36■■□□□ 1.01
HDDC3-201ENST00000330334 DOCK3Q8IZD9 2030 aa21.36■■□□□ 1.01
HDDC3-201ENST00000330334 USP17L12C9JPN9 530 aa21.35■■□□□ 1.01
HDDC3-201ENST00000330334 USP17L21D6R901 530 aa21.35■■□□□ 1.01
HDDC3-201ENST00000330334 SGPL1O95470 568 aa21.35■■□□□ 1.01
HDDC3-201ENST00000330334 CHGBP05060 677 aa21.35■■□□□ 1.01
HDDC3-201ENST00000330334 CYP2D6P10635 497 aa21.35■■□□□ 1.01
HDDC3-201ENST00000330334 XRCC5P13010 732 aaKnown RBP21.35■■□□□ 1.01
HDDC3-201ENST00000330334 EVX2Q03828 476 aa21.35■■□□□ 1.01
HDDC3-201ENST00000330334 Q3C1V9 767 aa21.35■■□□□ 1.01
HDDC3-201ENST00000330334 U2AF1L4Q8WU68 220 aaKnown RBP21.35■■□□□ 1.01
HDDC3-201ENST00000330334 SOCS4Q8WXH5 440 aa21.35■■□□□ 1.01
HDDC3-201ENST00000330334 GCC1Q96CN9 775 aa21.35■■□□□ 1.01
HDDC3-201ENST00000330334 PAK6Q9NQU5 681 aaPredicted RBP21.35■■□□□ 1.01
HDDC3-201ENST00000330334 SLC4A4Q9Y6R1 1079 aa21.35■■□□□ 1.01
HDDC3-201ENST00000330334 TTC41PQ6P2S7 1318 aa21.34■■□□□ 1.01
HDDC3-201ENST00000330334 SLC34A2O95436 690 aa21.34■■□□□ 1.01
HDDC3-201ENST00000330334 HMGCRP04035 888 aa21.34■■□□□ 1.01
HDDC3-201ENST00000330334 ZFYP08048 801 aaPredicted RBP21.34■■□□□ 1.01
HDDC3-201ENST00000330334 ZYXQ15942 572 aaKnown RBP21.34■■□□□ 1.01
HDDC3-201ENST00000330334 GIMAP6Q6P9H5 292 aa21.34■■□□□ 1.01
HDDC3-201ENST00000330334 STRBPQ96SI9 672 aaKnown RBP21.34■■□□□ 1.01
HDDC3-201ENST00000330334 NUDT12Q9BQG2 462 aa21.34■■□□□ 1.01
HDDC3-201ENST00000330334 NAV1Q8NEY1 1877 aa21.34■■□□□ 1.01
HDDC3-201ENST00000330334 A0A1W2PRG0 241 aa21.33■■□□□ 1.01
HDDC3-201ENST00000330334 MPHOSPH10O00566 681 aaKnown RBP21.33■■□□□ 1.01
HDDC3-201ENST00000330334 CCNA1P78396 465 aa21.33■■□□□ 1.01
HDDC3-201ENST00000330334 C16orf86Q6ZW13 317 aa21.33■■□□□ 1.01
HDDC3-201ENST00000330334 SLC44A5Q8NCS7 719 aa21.33■■□□□ 1.01
HDDC3-201ENST00000330334 DYNLL2Q96FJ2 89 aa21.33■■□□□ 1.01
HDDC3-201ENST00000330334 RNF113AO15541 343 aaKnown RBP21.32■■□□□ 1
HDDC3-201ENST00000330334 CDK8P49336 464 aa21.32■■□□□ 1
HDDC3-201ENST00000330334 LRRFIP1Q32MZ4 808 aaKnown RBP21.32■■□□□ 1
HDDC3-201ENST00000330334 CTR9Q6PD62 1173 aa21.32■■□□□ 1
HDDC3-201ENST00000330334 CCAR1Q8IX12 1150 aaKnown RBP21.32■■□□□ 1
HDDC3-201ENST00000330334 TRMT44Q8IYL2 757 aaKnown RBP21.32■■□□□ 1
HDDC3-201ENST00000330334 APPBP2Q92624 585 aa21.32■■□□□ 1
HDDC3-201ENST00000330334 LPAR1Q92633 364 aa21.32■■□□□ 1
HDDC3-201ENST00000330334 USP6NLQ92738 828 aa21.32■■□□□ 1
HDDC3-201ENST00000330334 CRISPLD2Q9H0B8 497 aa21.32■■□□□ 1
HDDC3-201ENST00000330334 RPAP3Q9H6T3 665 aaPredicted RBP21.32■■□□□ 1
HDDC3-201ENST00000330334 HOXC10Q9NYD6 342 aa21.32■■□□□ 1
HDDC3-201ENST00000330334 ERC2O15083 957 aa21.31■■□□□ 1
HDDC3-201ENST00000330334 PEX10O60683 326 aa21.31■■□□□ 1
HDDC3-201ENST00000330334 CNMDO75829 334 aa21.31■■□□□ 1
HDDC3-201ENST00000330334 SBK1Q52WX2 424 aa21.31■■□□□ 1
HDDC3-201ENST00000330334 MORN1Q5T089 497 aa21.31■■□□□ 1
HDDC3-201ENST00000330334 GPR142Q7Z601 462 aa21.31■■□□□ 1
HDDC3-201ENST00000330334 SIAH1Q8IUQ4 282 aa21.31■■□□□ 1
HDDC3-201ENST00000330334 PAGR1Q9BTK6 254 aa21.31■■□□□ 1
HDDC3-201ENST00000330334 PORCNQ9H237 461 aa21.31■■□□□ 1
HDDC3-201ENST00000330334 ARPP21Q9UBL0 812 aaPredicted RBP21.31■■□□□ 1
HDDC3-201ENST00000330334 RPTORQ8N122 1335 aa21.3■■□□□ 1
HDDC3-201ENST00000330334 GLRX3O76003 335 aaKnown RBP21.3■■□□□ 1
HDDC3-201ENST00000330334 AKR1B1P15121 316 aa21.3■■□□□ 1
HDDC3-201ENST00000330334 COG2Q14746 738 aa21.3■■□□□ 1
HDDC3-201ENST00000330334 PLEKHH3Q7Z736 793 aa21.3■■□□□ 1
HDDC3-201ENST00000330334 OSBP2Q969R2 916 aa21.3■■□□□ 1
HDDC3-201ENST00000330334 DEFB118Q96PH6 123 aa21.3■■□□□ 1
HDDC3-201ENST00000330334 SH2D4AQ9H788 454 aa21.3■■□□□ 1
HDDC3-201ENST00000330334 ARHGEF10LQ9HCE6 1279 aa21.3■■□□□ 1
HDDC3-201ENST00000330334 TMX2Q9Y320 296 aa21.3■■□□□ 1
HDDC3-201ENST00000330334 CYP2D7A0A087X1C5 515 aa21.29■■□□□ 1
HDDC3-201ENST00000330334 SPDYE16A6NNV3 312 aaPredicted RBP21.29■■□□□ 1
HDDC3-201ENST00000330334 GSG1L2A8MUP6 293 aa21.29■■□□□ 1
HDDC3-201ENST00000330334 GNAT2P19087 354 aa21.29■■□□□ 1
HDDC3-201ENST00000330334 AAMPQ13685 434 aa21.29■■□□□ 1
HDDC3-201ENST00000330334 MAP3K21Q5TCX8 1036 aa21.29■■□□□ 1
HDDC3-201ENST00000330334 TSHZ3Q63HK5 1081 aa21.29■■□□□ 1
HDDC3-201ENST00000330334 PI4K2BQ8TCG2 481 aa21.29■■□□□ 1
HDDC3-201ENST00000330334 KANSL2Q9H9L4 492 aa21.29■■□□□ 1
HDDC3-201ENST00000330334 HMX1Q9NP08 348 aaPredicted RBP21.29■■□□□ 1
HDDC3-201ENST00000330334 MYH7P12883 1935 aa21.28■■□□□ 1
HDDC3-201ENST00000330334 TFRCP02786 760 aaKnown RBP21.28■■□□□ 1
HDDC3-201ENST00000330334 CYP2B6P20813 491 aa21.28■■□□□ 1
HDDC3-201ENST00000330334 RGS2P41220 211 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms