RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ZMYM1Q5SVZ6 1142 aa33.09■■■□□ 2.89
ATPAF1-201ENST00000329231 TMEM179Q6ZVK1 233 aa33.09■■■□□ 2.89
ATPAF1-201ENST00000329231 ANKRD13CQ8N6S4 541 aa33.09■■■□□ 2.89
ATPAF1-201ENST00000329231 CCDC17Q96LX7 622 aa33.09■■■□□ 2.89
ATPAF1-201ENST00000329231 KIAA1683Q9H0B3 1180 aa33.09■■■□□ 2.89
ATPAF1-201ENST00000329231 PTCH2Q9Y6C5 1203 aa33.09■■■□□ 2.89
ATPAF1-201ENST00000329231 SOX10P56693 466 aa33.08■■■□□ 2.89
ATPAF1-201ENST00000329231 FAM110CQ1W6H9 321 aa33.08■■■□□ 2.89
ATPAF1-201ENST00000329231 C12orf42Q96LP6 360 aa33.08■■■□□ 2.89
ATPAF1-201ENST00000329231 SRRDQ9UH36 339 aa33.08■■■□□ 2.89
ATPAF1-201ENST00000329231 APPP05067 770 aa33.07■■■□□ 2.88
ATPAF1-201ENST00000329231 IRX6P78412 446 aaPredicted RBP33.07■■■□□ 2.88
ATPAF1-201ENST00000329231 ZYXQ15942 572 aaKnown RBP33.07■■■□□ 2.88
ATPAF1-201ENST00000329231 ACER1Q8TDN7 264 aa33.07■■■□□ 2.88
ATPAF1-201ENST00000329231 SEC62Q99442 399 aaKnown RBP33.07■■■□□ 2.88
ATPAF1-201ENST00000329231 PATL2C9JE40 543 aaKnown RBP33.06■■■□□ 2.88
ATPAF1-201ENST00000329231 SMIM22K7EJ46 135 aa33.06■■■□□ 2.88
ATPAF1-201ENST00000329231 ARMC5Q96C12 935 aa33.06■■■□□ 2.88
ATPAF1-201ENST00000329231 ZSWIM8A7E2V4 1837 aa33.05■■■□□ 2.88
ATPAF1-201ENST00000329231 TDO2P48775 406 aa33.05■■■□□ 2.88
ATPAF1-201ENST00000329231 SLC9C1Q4G0N8 1177 aa33.05■■■□□ 2.88
ATPAF1-201ENST00000329231 NBPF11Q86T75 865 aa33.05■■■□□ 2.88
ATPAF1-201ENST00000329231 TICAM2Q86XR7 235 aa33.05■■■□□ 2.88
ATPAF1-201ENST00000329231 NACAP1Q9BZK3 213 aa33.05■■■□□ 2.88
ATPAF1-201ENST00000329231 AKR1B1P15121 316 aa33.04■■■□□ 2.88
ATPAF1-201ENST00000329231 P2RX7Q99572 595 aaKnown RBP33.04■■■□□ 2.88
ATPAF1-201ENST00000329231 EPB41L4AQ9HCS5 686 aaPredicted RBP33.04■■■□□ 2.88
ATPAF1-201ENST00000329231 MINDY4BA8MYZ0 360 aa33.03■■■□□ 2.88
ATPAF1-201ENST00000329231 MYPNQ86TC9 1320 aa33.02■■■□□ 2.88
ATPAF1-201ENST00000329231 PLEKHM2Q8IWE5 1019 aa33.02■■■□□ 2.88
ATPAF1-201ENST00000329231 IFNL3Q8IZI9 196 aa33.02■■■□□ 2.88
ATPAF1-201ENST00000329231 TRIM6-TRIM34B2RNG4 842 aa33.01■■■□□ 2.87
ATPAF1-201ENST00000329231 USP17L15C9J2P7 530 aa33.01■■■□□ 2.87
ATPAF1-201ENST00000329231 USP17L13C9JLJ4 530 aa33.01■■■□□ 2.87
ATPAF1-201ENST00000329231 USP17L11C9JVI0 530 aa33.01■■■□□ 2.87
ATPAF1-201ENST00000329231 USP17L18D6R9N7 530 aa33.01■■■□□ 2.87
ATPAF1-201ENST00000329231 USP17L22D6RA61 530 aa33.01■■■□□ 2.87
ATPAF1-201ENST00000329231 USP17L17D6RBQ6 530 aa33.01■■■□□ 2.87
ATPAF1-201ENST00000329231 USP17L19D6RCP7 530 aa33.01■■■□□ 2.87
ATPAF1-201ENST00000329231 USP17L20D6RJB6 530 aa33.01■■■□□ 2.87
ATPAF1-201ENST00000329231 TNPO2O14787 897 aaKnown RBP33.01■■■□□ 2.87
ATPAF1-201ENST00000329231 HERVK_113P62684 666 aa33.01■■■□□ 2.87
ATPAF1-201ENST00000329231 USP17L24Q0WX57 530 aa33.01■■■□□ 2.87
ATPAF1-201ENST00000329231 RAET1EQ8TD07 263 aa33.01■■■□□ 2.87
ATPAF1-201ENST00000329231 GTF3C2Q8WUA4 911 aaPredicted RBP33.01■■■□□ 2.87
ATPAF1-201ENST00000329231 OSBPL3Q9H4L5 887 aa33.01■■■□□ 2.87
ATPAF1-201ENST00000329231 ROBO3Q96MS0 1386 aa33■■■□□ 2.87
ATPAF1-201ENST00000329231 VCAM1P19320 739 aa33■■■□□ 2.87
ATPAF1-201ENST00000329231 ICA1Q05084 483 aa33■■■□□ 2.87
ATPAF1-201ENST00000329231 MKNK2Q9HBH9 465 aa33■■■□□ 2.87
ATPAF1-201ENST00000329231 ARHGEF10LQ9HCE6 1279 aa33■■■□□ 2.87
ATPAF1-201ENST00000329231 MORF4L1Q9UBU8 362 aa33■■■□□ 2.87
ATPAF1-201ENST00000329231 HTTP42858 3142 aa33■■■□□ 2.87
ATPAF1-201ENST00000329231 MYH8P13535 1937 aa32.99■■■□□ 2.87
ATPAF1-201ENST00000329231 A0A1W2PRG0 241 aa32.99■■■□□ 2.87
ATPAF1-201ENST00000329231 MLLT1Q03111 559 aaPredicted RBP32.99■■■□□ 2.87
ATPAF1-201ENST00000329231 SH2D4AQ9H788 454 aa32.99■■■□□ 2.87
ATPAF1-201ENST00000329231 HELLSQ9NRZ9 838 aa32.99■■■□□ 2.87
ATPAF1-201ENST00000329231 PRKCZQ05513 592 aa32.98■■■□□ 2.87
ATPAF1-201ENST00000329231 COA7Q96BR5 231 aa32.98■■■□□ 2.87
ATPAF1-201ENST00000329231 ZNF333Q96JL9 665 aa32.98■■■□□ 2.87
ATPAF1-201ENST00000329231 NAPBQ9H115 298 aa32.98■■■□□ 2.87
ATPAF1-201ENST00000329231 KANSL2Q9H9L4 492 aa32.98■■■□□ 2.87
ATPAF1-201ENST00000329231 ZNF287Q9HBT7 754 aa32.98■■■□□ 2.87
ATPAF1-201ENST00000329231 CATSPERGQ6ZRH7 1159 aa32.97■■■□□ 2.87
ATPAF1-201ENST00000329231 RILPL2Q969X0 211 aa32.97■■■□□ 2.87
ATPAF1-201ENST00000329231 CCDC129Q6ZRS4 1044 aa32.96■■■□□ 2.87
ATPAF1-201ENST00000329231 STK11IPQ8N1F8 1099 aa32.96■■■□□ 2.87
ATPAF1-201ENST00000329231 GPRC5AQ8NFJ5 357 aa32.96■■■□□ 2.87
ATPAF1-201ENST00000329231 RPAP3Q9H6T3 665 aaPredicted RBP32.96■■■□□ 2.87
ATPAF1-201ENST00000329231 MGAMO43451 1857 aa32.96■■■□□ 2.87
ATPAF1-201ENST00000329231 CLEC10AQ8IUN9 316 aa32.95■■■□□ 2.87
ATPAF1-201ENST00000329231 SIAH1Q8IUQ4 282 aa32.95■■■□□ 2.87
ATPAF1-201ENST00000329231 SH3TC2Q8TF17 1288 aa32.95■■■□□ 2.87
ATPAF1-201ENST00000329231 GABRQQ9UN88 632 aa32.95■■■□□ 2.87
ATPAF1-201ENST00000329231 TMX2Q9Y320 296 aa32.95■■■□□ 2.87
ATPAF1-201ENST00000329231 SLC3A2P08195 630 aaKnown RBP32.94■■■□□ 2.86
ATPAF1-201ENST00000329231 RASA1P20936 1047 aa32.94■■■□□ 2.86
ATPAF1-201ENST00000329231 GRK4P32298 578 aa32.94■■■□□ 2.86
ATPAF1-201ENST00000329231 LPAR1Q92633 364 aa32.94■■■□□ 2.86
ATPAF1-201ENST00000329231 TXNRD2Q9NNW7 524 aa32.94■■■□□ 2.86
ATPAF1-201ENST00000329231 RBPJLQ9UBG7 517 aa32.94■■■□□ 2.86
ATPAF1-201ENST00000329231 FLT3LGP49771 235 aa32.93■■■□□ 2.86
ATPAF1-201ENST00000329231 MCMDC2Q4G0Z9 681 aa32.93■■■□□ 2.86
ATPAF1-201ENST00000329231 TMEM106CQ9BVX2 250 aa32.93■■■□□ 2.86
ATPAF1-201ENST00000329231 EEF2P13639 858 aaKnown RBP32.92■■■□□ 2.86
ATPAF1-201ENST00000329231 ATP2B2Q01814 1243 aa32.92■■■□□ 2.86
ATPAF1-201ENST00000329231 ZNF444Q8N0Y2 327 aaPredicted RBP32.92■■■□□ 2.86
ATPAF1-201ENST00000329231 FAM227BQ96M60 508 aa32.92■■■□□ 2.86
ATPAF1-201ENST00000329231 PAGR1Q9BTK6 254 aa32.92■■■□□ 2.86
ATPAF1-201ENST00000329231 ERVK-9P63128 1117 aa32.91■■■□□ 2.86
ATPAF1-201ENST00000329231 ERVK-24P63145 666 aa32.91■■■□□ 2.86
ATPAF1-201ENST00000329231 PDE4BQ07343 736 aa32.91■■■□□ 2.86
ATPAF1-201ENST00000329231 PPARAQ07869 468 aa32.91■■■□□ 2.86
ATPAF1-201ENST00000329231 SLAIN1Q8ND83 568 aa32.91■■■□□ 2.86
ATPAF1-201ENST00000329231 VCPKMTQ9H867 229 aa32.91■■■□□ 2.86
ATPAF1-201ENST00000329231 RABGAP1Q9Y3P9 1069 aa32.91■■■□□ 2.86
ATPAF1-201ENST00000329231 A0A0D9SFI3 127 aa32.9■■■□□ 2.86
ATPAF1-201ENST00000329231 IRF5Q13568 498 aa32.9■■■□□ 2.86
ATPAF1-201ENST00000329231 LBX2Q6XYB7 198 aa32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms