RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 COL23A1Q86Y22 540 aaPredicted RBP8.72□□□□□ -1.01
IFT88-201ENST00000319980 RTFDC1Q9BY42 306 aaPredicted RBP8.72□□□□□ -1.01
IFT88-201ENST00000319980 DUOX1Q9NRD9 1551 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 BAZ2AQ9UIF9 1905 aaKnown RBP8.72□□□□□ -1.01
IFT88-201ENST00000319980 KLRG2A4D1S0 409 aaPredicted RBP8.72□□□□□ -1.01
IFT88-201ENST00000319980 BIN1O00499 593 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 IQCB1Q15051 598 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 RCSD1Q6JBY9 416 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 OLFM4Q6UX06 510 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 TMTC3Q6ZXV5 915 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 NLGN1Q8N2Q7 840 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 SRBD1Q8N5C6 995 aaKnown RBP8.72□□□□□ -1.01
IFT88-201ENST00000319980 SLC44A5Q8NCS7 719 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 SHISA4Q96DD7 197 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 PCDHB6Q9Y5E3 794 aa8.72□□□□□ -1.01
IFT88-201ENST00000319980 PPEF1O14829 653 aaPredicted RBP8.71□□□□□ -1.01
IFT88-201ENST00000319980 GTF2IP78347 998 aa8.71□□□□□ -1.01
IFT88-201ENST00000319980 DRC7Q8IY82 874 aa8.71□□□□□ -1.01
IFT88-201ENST00000319980 ZNF444Q8N0Y2 327 aaPredicted RBP8.71□□□□□ -1.01
IFT88-201ENST00000319980 KRI1Q8N9T8 703 aaKnown RBP8.71□□□□□ -1.01
IFT88-201ENST00000319980 NAP1L5Q96NT1 182 aaPredicted RBP8.71□□□□□ -1.01
IFT88-201ENST00000319980 KAT14Q9H8E8 782 aa8.71□□□□□ -1.01
IFT88-201ENST00000319980 IL17RBQ9NRM6 502 aa8.71□□□□□ -1.01
IFT88-201ENST00000319980 USP17L3A6NCW0 530 aa8.71□□□□□ -1.02
IFT88-201ENST00000319980 USP17L4A6NCW7 530 aa8.71□□□□□ -1.02
IFT88-201ENST00000319980 IGSF3O75054 1194 aa8.71□□□□□ -1.02
IFT88-201ENST00000319980 TSPY3P0CV98 308 aa8.71□□□□□ -1.02
IFT88-201ENST00000319980 TSPY8P0CW00 308 aa8.71□□□□□ -1.02
IFT88-201ENST00000319980 KIAA2012Q0VF49 1180 aa8.71□□□□□ -1.02
IFT88-201ENST00000319980 ISM2Q6H9L7 571 aa8.71□□□□□ -1.02
IFT88-201ENST00000319980 USP17L1Q7RTZ2 530 aa8.71□□□□□ -1.02
IFT88-201ENST00000319980 CEP57L1Q8IYX8 460 aa8.71□□□□□ -1.02
IFT88-201ENST00000319980 MTMR7Q9Y216 660 aa8.71□□□□□ -1.02
IFT88-201ENST00000319980 HPSEQ9Y251 543 aa8.71□□□□□ -1.02
IFT88-201ENST00000319980 GPR75-ASB3A0A0A6YYF3 556 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 FAM205CA6NFA0 338 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 CUTAO60888 179 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 HMGB2P26583 209 aaKnown RBP8.7□□□□□ -1.02
IFT88-201ENST00000319980 GRIN1Q05586 938 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 DPCR1Q3MIW9 517 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 RESP18Q5W5W9 173 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 SP8Q8IXZ3 490 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 TEX11Q8IYF3 940 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 PHF20Q9BVI0 1012 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 NAT10Q9H0A0 1025 aaKnown RBP8.7□□□□□ -1.02
IFT88-201ENST00000319980 KCNH3Q9ULD8 1083 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 STX8Q9UNK0 236 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 CHD4Q14839 1912 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 GOLGA6L6A8MZA4 724 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 F8W031 263 aaPredicted RBP8.7□□□□□ -1.02
IFT88-201ENST00000319980 SRGNP10124 158 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 VEGFAP15692 232 aaPredicted RBP8.7□□□□□ -1.02
IFT88-201ENST00000319980 KRT2P35908 639 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 EARS2Q5JPH6 523 aaKnown RBP8.7□□□□□ -1.02
IFT88-201ENST00000319980 DGKHQ86XP1 1220 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 PNMA1Q8ND90 353 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 TBC1D22AQ8WUA7 517 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 ATP6V0A2Q9Y487 856 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 MYH13Q9UKX3 1938 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 UBR3Q6ZT12 1888 aa8.7□□□□□ -1.02
IFT88-201ENST00000319980 MMP10P09238 476 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 KIF5BP33176 963 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 ZNF75DP51815 510 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 EN1Q05925 392 aaPredicted RBP8.69□□□□□ -1.02
IFT88-201ENST00000319980 EZH2Q15910 746 aaKnown RBP8.69□□□□□ -1.02
IFT88-201ENST00000319980 LONRF3Q496Y0 759 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 DHX40Q8IX18 779 aaKnown RBP8.69□□□□□ -1.02
IFT88-201ENST00000319980 AOPEPQ8N6M6 819 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 ZC3H12CQ9C0D7 883 aaKnown RBP8.69□□□□□ -1.02
IFT88-201ENST00000319980 CNTNAP5Q8WYK1 1306 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 PTPREP23469 700 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 MSL1Q68DK7 614 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 TMC4Q7Z404 712 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 PLA2G4DQ86XP0 818 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 STAG2Q8N3U4 1231 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 CNNM3Q8NE01 707 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 AKT1S1Q96B36 256 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 TIGD1Q96MW7 591 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 BRMS1Q9HCU9 246 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 FBXO2Q9UK22 296 aaPredicted RBP8.69□□□□□ -1.02
IFT88-201ENST00000319980 MYH2Q9UKX2 1941 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 MYH15Q9Y2K3 1946 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 OFD1O75665 1012 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 SCG2P13521 617 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 PLCG2P16885 1265 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 NLRP5P59047 1200 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 PNOCQ13519 176 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 CERS3Q8IU89 383 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 SLF2Q8IX21 1173 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 NRBP1Q9UHY1 535 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 CEP131Q9UPN4 1083 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 FLT1P17948 1338 aa8.69□□□□□ -1.02
IFT88-201ENST00000319980 FAM237AA0A1B0GTK4 181 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 TRIM75PA6NK02 468 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 NPR1P16066 1061 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 RASA1P20936 1047 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 PTGS1P23219 599 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 RHBDL3P58872 404 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 DOK7Q18PE1 504 aa8.68□□□□□ -1.02
IFT88-201ENST00000319980 NOM1Q5C9Z4 860 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms