RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 YEATS4O95619 227 aa11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 LDHBP07195 334 aaKnown RBP11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 HMGB2P26583 209 aaKnown RBP11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 GTF2A1P52655 376 aaPredicted RBP11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 NLRP12P59046 1061 aa11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 ICE2Q659A1 982 aa11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 SP8Q8IXZ3 490 aa11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 LINC00301Q8NCQ3 95 aa11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 XPO4Q9C0E2 1151 aaKnown RBP11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 ANKRD31Q8N7Z5 1873 aa11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 SFPQP23246 707 aaKnown RBP eCLIP11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 HNRNPH2P55795 449 aaKnown RBP11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 GTF2IP78347 998 aa11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 ZRSR1Q15695 479 aaKnown RBP11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 ALX1Q15699 326 aa11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 TEX35Q5T0J7 233 aa11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 MASTLQ96GX5 879 aa11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 NOL10Q9BSC4 688 aaKnown RBP11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 MYL10Q9BUA6 226 aa11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 POLR3EQ9NVU0 708 aa11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.81□□□□□ -0.52
APOBEC3F-201ENST00000308521 CACNA1SQ13698 1873 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 USP17L12C9JPN9 530 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 USP17L21D6R901 530 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 IKBKBO14920 756 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 GNAT2P19087 354 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 BAG6P46379 1132 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 MFSD6Q6ZSS7 791 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 TMC6Q7Z403 805 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 KCNQ5Q9NR82 932 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 IFNKQ9P0W0 207 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 PHLPP2Q6ZVD8 1323 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 A0A087WWV3 80 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 H0YIN7 160 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 CYP2D6P10635 497 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 ALDH1B1P30837 517 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 NDUFA8P51970 172 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 PPARAQ07869 468 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 MFSD14BQ5SR56 506 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 AKNAD1Q5T1N1 836 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 DPP8Q6V1X1 898 aaPredicted RBP11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 SYT10Q6XYQ8 523 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 GOLGA6L1Q8N7Z2 621 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 WDR66Q8TBY9 1149 aa11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 SRRTQ9BXP5 876 aaKnown RBP11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 CWC15Q9P013 229 aaKnown RBP11.8□□□□□ -0.52
APOBEC3F-201ENST00000308521 A0A1B0GVL5 298 aa11.79□□□□□ -0.52
APOBEC3F-201ENST00000308521 DHX16O60231 1041 aaKnown RBP11.79□□□□□ -0.52
APOBEC3F-201ENST00000308521 SMC2O95347 1197 aa11.79□□□□□ -0.52
APOBEC3F-201ENST00000308521 FDPSP14324 419 aaKnown RBP11.79□□□□□ -0.52
APOBEC3F-201ENST00000308521 NCAPHQ15003 741 aa11.79□□□□□ -0.52
APOBEC3F-201ENST00000308521 ERCC6LQ2NKX8 1250 aa11.79□□□□□ -0.52
APOBEC3F-201ENST00000308521 DPCR1Q3MIW9 517 aa11.79□□□□□ -0.52
APOBEC3F-201ENST00000308521 BRAPQ7Z569 592 aa11.79□□□□□ -0.52
APOBEC3F-201ENST00000308521 ZC3H12CQ9C0D7 883 aaKnown RBP11.79□□□□□ -0.52
APOBEC3F-201ENST00000308521 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.79□□□□□ -0.52
APOBEC3F-201ENST00000308521 RSPH14Q9UHP6 348 aa11.79□□□□□ -0.52
APOBEC3F-201ENST00000308521 BAZ2AQ9UIF9 1905 aaKnown RBP11.79□□□□□ -0.52
APOBEC3F-201ENST00000308521 GOLGA8BA8MQT2 603 aa11.79□□□□□ -0.52
APOBEC3F-201ENST00000308521 SLC3A2P08195 630 aaKnown RBP11.79□□□□□ -0.52
APOBEC3F-201ENST00000308521 GUCY1B3Q02153 619 aa11.79□□□□□ -0.52
APOBEC3F-201ENST00000308521 STK38Q15208 465 aa11.79□□□□□ -0.52
APOBEC3F-201ENST00000308521 FHOD1Q9Y613 1164 aa11.79□□□□□ -0.52
APOBEC3F-201ENST00000308521 ATP8B1O43520 1251 aa11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 GUCY2CP25092 1073 aa11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 CASQ1P31415 396 aa11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 ETF1P62495 437 aaKnown RBP11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 NFXL1Q6ZNB6 911 aa11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 SH3RF3Q8TEJ3 882 aaPredicted RBP11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 DBNDD1Q9H9R9 158 aa11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 HPS5Q9UPZ3 1129 aa11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 IFIT3O14879 490 aaKnown RBP11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 SPTLC2O15270 562 aa11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 MYO1BO43795 1136 aa11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 TPM1P09493 284 aa11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 USP17L8P0C7I0 530 aa11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 IL1R1P14778 569 aa11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 CLCN6P51797 869 aa11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 SF3A1Q15459 793 aaKnown RBP11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 TMEM67Q5HYA8 995 aa11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 SPTY2D1Q68D10 685 aaPredicted RBP11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 FCHSD1Q86WN1 690 aa11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 MICU3Q86XE3 530 aa11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 CERS3Q8IU89 383 aa11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 DCP1AQ9NPI6 582 aaPredicted RBP11.78□□□□□ -0.52
APOBEC3F-201ENST00000308521 G3V3G9 751 aa11.77□□□□□ -0.52
APOBEC3F-201ENST00000308521 ZRANB2O95218 330 aaKnown RBP eCLIP11.77□□□□□ -0.52
APOBEC3F-201ENST00000308521 CMA1P23946 247 aa11.77□□□□□ -0.52
APOBEC3F-201ENST00000308521 DCAF8Q5TAQ9 597 aa11.77□□□□□ -0.52
APOBEC3F-201ENST00000308521 OTUD7BQ6GQQ9 843 aa11.77□□□□□ -0.52
APOBEC3F-201ENST00000308521 IGDCC4Q8TDY8 1250 aa11.77□□□□□ -0.52
APOBEC3F-201ENST00000308521 ERCC4Q92889 916 aaPredicted RBP11.77□□□□□ -0.52
APOBEC3F-201ENST00000308521 TMX4Q9H1E5 349 aaPredicted RBP11.77□□□□□ -0.52
APOBEC3F-201ENST00000308521 TMX1Q9H3N1 280 aa11.77□□□□□ -0.52
APOBEC3F-201ENST00000308521 GJB4Q9NTQ9 266 aa11.77□□□□□ -0.52
APOBEC3F-201ENST00000308521 ARGLU1Q9NWB6 273 aaPredicted RBP11.77□□□□□ -0.52
APOBEC3F-201ENST00000308521 MCM9Q9NXL9 1143 aa11.77□□□□□ -0.52
APOBEC3F-201ENST00000308521 ANGEL1Q9UNK9 670 aaKnown RBP11.77□□□□□ -0.52
APOBEC3F-201ENST00000308521 CLIC4Q9Y696 253 aa11.77□□□□□ -0.52
APOBEC3F-201ENST00000308521 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms