RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 SLC26A6Q9BXS9 759 aa28.44■■■□□ 2.14
R3HCC1-201ENST00000265806 ZNF70Q9UC06 446 aaPredicted RBP28.44■■■□□ 2.14
R3HCC1-201ENST00000265806 EIF6P56537 245 aaKnown RBP28.43■■■□□ 2.14
R3HCC1-201ENST00000265806 FKBP1CQ5VVH2 108 aa28.43■■■□□ 2.14
R3HCC1-201ENST00000265806 ILDR2Q71H61 639 aa28.43■■■□□ 2.14
R3HCC1-201ENST00000265806 METTL16Q86W50 562 aaKnown RBP28.43■■■□□ 2.14
R3HCC1-201ENST00000265806 FOXP4Q8IVH2 680 aaPredicted RBP28.43■■■□□ 2.14
R3HCC1-201ENST00000265806 TMEM87AQ8NBN3 555 aa28.43■■■□□ 2.14
R3HCC1-201ENST00000265806 WASF1Q92558 559 aa28.43■■■□□ 2.14
R3HCC1-201ENST00000265806 ALG1Q9BT22 464 aa28.43■■■□□ 2.14
R3HCC1-201ENST00000265806 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.43■■■□□ 2.14
R3HCC1-201ENST00000265806 PRPF40AO75400 957 aaKnown RBP28.42■■■□□ 2.14
R3HCC1-201ENST00000265806 FUT2Q10981 343 aa28.42■■■□□ 2.14
R3HCC1-201ENST00000265806 ZSCAN29Q8IWY8 852 aaPredicted RBP28.42■■■□□ 2.14
R3HCC1-201ENST00000265806 TMEM47Q9BQJ4 181 aa28.42■■■□□ 2.14
R3HCC1-201ENST00000265806 RNF26Q9BY78 433 aaPredicted RBP28.42■■■□□ 2.14
R3HCC1-201ENST00000265806 STX8Q9UNK0 236 aa28.42■■■□□ 2.14
R3HCC1-201ENST00000265806 FOSBP53539 338 aa28.42■■■□□ 2.14
R3HCC1-201ENST00000265806 ZNF280AP59817 542 aaPredicted RBP28.42■■■□□ 2.14
R3HCC1-201ENST00000265806 DNM1Q05193 864 aaKnown RBP28.42■■■□□ 2.14
R3HCC1-201ENST00000265806 CEP95Q96GE4 821 aa28.42■■■□□ 2.14
R3HCC1-201ENST00000265806 CCDC17Q96LX7 622 aa28.42■■■□□ 2.14
R3HCC1-201ENST00000265806 DNAJC18Q9H819 358 aa28.42■■■□□ 2.14
R3HCC1-201ENST00000265806 IGKV6D-41A0A0C4DH26 115 aa28.41■■■□□ 2.14
R3HCC1-201ENST00000265806 TMTC3Q6ZXV5 915 aa28.41■■■□□ 2.14
R3HCC1-201ENST00000265806 DPF2Q92785 391 aa28.41■■■□□ 2.14
R3HCC1-201ENST00000265806 DEXIO95424 95 aa28.4■■■□□ 2.14
R3HCC1-201ENST00000265806 AKR1B1P15121 316 aa28.4■■■□□ 2.14
R3HCC1-201ENST00000265806 KIF5BP33176 963 aa28.4■■■□□ 2.14
R3HCC1-201ENST00000265806 MYOZ2Q9NPC6 264 aa28.4■■■□□ 2.14
R3HCC1-201ENST00000265806 CNPY2Q9Y2B0 182 aa28.4■■■□□ 2.14
R3HCC1-201ENST00000265806 GUCY1B3Q02153 619 aa28.39■■■□□ 2.14
R3HCC1-201ENST00000265806 AIFM3Q96NN9 605 aa28.39■■■□□ 2.14
R3HCC1-201ENST00000265806 MTMR4Q9NYA4 1195 aa28.39■■■□□ 2.14
R3HCC1-201ENST00000265806 CLRN2A0PK11 232 aa28.39■■■□□ 2.13
R3HCC1-201ENST00000265806 TOP1P11387 765 aaKnown RBP28.39■■■□□ 2.13
R3HCC1-201ENST00000265806 KRT85P78386 507 aa28.39■■■□□ 2.13
R3HCC1-201ENST00000265806 CMTR1Q8N1G2 835 aaKnown RBP28.39■■■□□ 2.13
R3HCC1-201ENST00000265806 FAM151AQ8WW52 585 aa28.39■■■□□ 2.13
R3HCC1-201ENST00000265806 GREB1LQ9C091 1923 aaPredicted RBP28.38■■■□□ 2.13
R3HCC1-201ENST00000265806 WNT10BO00744 389 aa28.38■■■□□ 2.13
R3HCC1-201ENST00000265806 MYO1BO43795 1136 aa28.38■■■□□ 2.13
R3HCC1-201ENST00000265806 PLEKHA8P1O95397 391 aa28.38■■■□□ 2.13
R3HCC1-201ENST00000265806 GRM4Q14833 912 aa28.38■■■□□ 2.13
R3HCC1-201ENST00000265806 TATDN1Q6P1N9 297 aa28.38■■■□□ 2.13
R3HCC1-201ENST00000265806 SYT17Q9BSW7 474 aa28.38■■■□□ 2.13
R3HCC1-201ENST00000265806 TCP10L2B9ZVM9 353 aa28.37■■■□□ 2.13
R3HCC1-201ENST00000265806 PRPF3O43395 683 aaKnown RBP28.37■■■□□ 2.13
R3HCC1-201ENST00000265806 CSPP1Q1MSJ5 1256 aa28.37■■■□□ 2.13
R3HCC1-201ENST00000265806 OTUD7BQ6GQQ9 843 aa28.37■■■□□ 2.13
R3HCC1-201ENST00000265806 ARHGAP27Q6ZUM4 889 aa28.37■■■□□ 2.13
R3HCC1-201ENST00000265806 CCDC82Q8N4S0 544 aa28.37■■■□□ 2.13
R3HCC1-201ENST00000265806 LMNB1P20700 586 aa28.37■■■□□ 2.13
R3HCC1-201ENST00000265806 KLHL40Q2TBA0 621 aa28.37■■■□□ 2.13
R3HCC1-201ENST00000265806 FAM173BQ6P4H8 233 aa28.37■■■□□ 2.13
R3HCC1-201ENST00000265806 USP48Q86UV5 1035 aa28.37■■■□□ 2.13
R3HCC1-201ENST00000265806 FAM83AQ86UY5 434 aa28.37■■■□□ 2.13
R3HCC1-201ENST00000265806 TRIM34Q9BYJ4 488 aa28.37■■■□□ 2.13
R3HCC1-201ENST00000265806 GDPD2Q9HCC8 539 aa28.37■■■□□ 2.13
R3HCC1-201ENST00000265806 CNTNAP1P78357 1384 aa28.36■■■□□ 2.13
R3HCC1-201ENST00000265806 DICER1Q9UPY3 1922 aaKnown RBP28.36■■■□□ 2.13
R3HCC1-201ENST00000265806 NCLP19338 710 aaKnown RBP28.36■■■□□ 2.13
R3HCC1-201ENST00000265806 GUCY1A2P33402 732 aa28.36■■■□□ 2.13
R3HCC1-201ENST00000265806 GMPSP49915 693 aaPredicted RBP28.36■■■□□ 2.13
R3HCC1-201ENST00000265806 GNAQP50148 359 aa28.36■■■□□ 2.13
R3HCC1-201ENST00000265806 AKAP17AQ02040 695 aaKnown RBP28.36■■■□□ 2.13
R3HCC1-201ENST00000265806 PPP4R3BQ5MIZ7 849 aa28.36■■■□□ 2.13
R3HCC1-201ENST00000265806 KRT40Q6A162 431 aa28.36■■■□□ 2.13
R3HCC1-201ENST00000265806 CSRNP1Q96S65 589 aa28.36■■■□□ 2.13
R3HCC1-201ENST00000265806 GJB4Q9NTQ9 266 aa28.36■■■□□ 2.13
R3HCC1-201ENST00000265806 CNTNAP5Q8WYK1 1306 aa28.35■■■□□ 2.13
R3HCC1-201ENST00000265806 UBE2Q2LH0YL09 131 aa28.35■■■□□ 2.13
R3HCC1-201ENST00000265806 SRBD1Q8N5C6 995 aaKnown RBP28.35■■■□□ 2.13
R3HCC1-201ENST00000265806 DDX49Q9Y6V7 483 aaKnown RBP28.35■■■□□ 2.13
R3HCC1-201ENST00000265806 SHTN1A0MZ66 631 aa28.34■■■□□ 2.13
R3HCC1-201ENST00000265806 TRIM29Q14134 588 aa28.34■■■□□ 2.13
R3HCC1-201ENST00000265806 MAD2L2Q9UI95 211 aa28.34■■■□□ 2.13
R3HCC1-201ENST00000265806 HERC5Q9UII4 1024 aaKnown RBP28.34■■■□□ 2.13
R3HCC1-201ENST00000265806 MYH6P13533 1939 aa28.34■■■□□ 2.13
R3HCC1-201ENST00000265806 ZNF541Q9H0D2 1346 aa28.34■■■□□ 2.13
R3HCC1-201ENST00000265806 FIBPO43427 364 aa28.34■■■□□ 2.13
R3HCC1-201ENST00000265806 TTLL1O95922 423 aa28.34■■■□□ 2.13
R3HCC1-201ENST00000265806 SLURP2P0DP57 97 aa28.34■■■□□ 2.13
R3HCC1-201ENST00000265806 NBPF9Q3BBW0 867 aa28.34■■■□□ 2.13
R3HCC1-201ENST00000265806 CERKLQ49MI3 558 aaPredicted RBP28.34■■■□□ 2.13
R3HCC1-201ENST00000265806 ATL3Q6DD88 541 aa28.34■■■□□ 2.13
R3HCC1-201ENST00000265806 KIF23Q02241 960 aaPredicted RBP28.33■■■□□ 2.13
R3HCC1-201ENST00000265806 PKN1Q16512 942 aa28.33■■■□□ 2.13
R3HCC1-201ENST00000265806 BRAPQ7Z569 592 aa28.33■■■□□ 2.13
R3HCC1-201ENST00000265806 MICALL2Q8IY33 904 aa28.33■■■□□ 2.13
R3HCC1-201ENST00000265806 SCAND2PQ9GZW5 306 aaPredicted RBP28.33■■■□□ 2.13
R3HCC1-201ENST00000265806 VEZTQ9HBM0 779 aa28.33■■■□□ 2.13
R3HCC1-201ENST00000265806 GJA3Q9Y6H8 435 aa28.33■■■□□ 2.13
R3HCC1-201ENST00000265806 PALM3A6NDB9 673 aaPredicted RBP28.32■■■□□ 2.12
R3HCC1-201ENST00000265806 FAM196BA6NMK8 535 aa28.32■■■□□ 2.12
R3HCC1-201ENST00000265806 RBM27Q9P2N5 1060 aaKnown RBP28.32■■■□□ 2.12
R3HCC1-201ENST00000265806 V9GY48 417 aaPredicted RBP28.32■■■□□ 2.12
R3HCC1-201ENST00000265806 MYH15Q9Y2K3 1946 aa28.32■■■□□ 2.12
R3HCC1-201ENST00000265806 LZTS2Q9BRK4 669 aa28.32■■■□□ 2.12
R3HCC1-201ENST00000265806 CNOT7Q9UIV1 285 aaKnown RBP28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms