RNA–Protein interactions for RNA: ENST00000263578.9

FOXRED1-201, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FOXRED1, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-201ENST00000263578 YDJCA8MPS7 323 aa18.17■□□□□ 0.5
FOXRED1-201ENST00000263578 LIG1P18858 919 aa18.17■□□□□ 0.5
FOXRED1-201ENST00000263578 U2AF2P26368 475 aaKnown RBP eCLIP18.17■□□□□ 0.52e-7■□□□□ 10
FOXRED1-201ENST00000263578 SAFBQ15424 915 aaKnown RBP eCLIP18.17■□□□□ 0.5
FOXRED1-201ENST00000263578 MTFR1LQ9H019 292 aa18.17■□□□□ 0.5
FOXRED1-201ENST00000263578 SERPINA10Q9UK55 444 aa18.17■□□□□ 0.5
FOXRED1-201ENST00000263578 BRCA1P38398 1863 aaKnown RBP18.17■□□□□ 0.5
FOXRED1-201ENST00000263578 PLIN4Q96Q06 1357 aa18.16■□□□□ 0.5
FOXRED1-201ENST00000263578 YEATS4O95619 227 aa18.16■□□□□ 0.5
FOXRED1-201ENST00000263578 POLD1P28340 1107 aa18.16■□□□□ 0.5
FOXRED1-201ENST00000263578 GABPAQ06546 454 aa18.16■□□□□ 0.5
FOXRED1-201ENST00000263578 SOGA3Q5TF21 947 aa18.16■□□□□ 0.5
FOXRED1-201ENST00000263578 XBP1P17861 261 aa18.15■□□□□ 0.5
FOXRED1-201ENST00000263578 NASPP49321 788 aaPredicted RBP18.15■□□□□ 0.5
FOXRED1-201ENST00000263578 RBM5P52756 815 aaKnown RBP eCLIP18.15■□□□□ 0.5
FOXRED1-201ENST00000263578 TGFB2P61812 414 aa18.15■□□□□ 0.5
FOXRED1-201ENST00000263578 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.15■□□□□ 0.5
FOXRED1-201ENST00000263578 STX8Q9UNK0 236 aa18.15■□□□□ 0.5
FOXRED1-201ENST00000263578 HLA-DOAP06340 250 aa18.15■□□□□ 0.5
FOXRED1-201ENST00000263578 STK38Q15208 465 aa18.15■□□□□ 0.5
FOXRED1-201ENST00000263578 PKN1Q16512 942 aa18.15■□□□□ 0.5
FOXRED1-201ENST00000263578 DIS3L2Q8IYB7 885 aaKnown RBP18.15■□□□□ 0.5
FOXRED1-201ENST00000263578 SRBD1Q8N5C6 995 aaKnown RBP18.15■□□□□ 0.5
FOXRED1-201ENST00000263578 LINC00301Q8NCQ3 95 aa18.15■□□□□ 0.5
FOXRED1-201ENST00000263578 KCNG4Q8TDN1 519 aa18.15■□□□□ 0.5
FOXRED1-201ENST00000263578 SERPINB13Q9UIV8 391 aa18.15■□□□□ 0.5
FOXRED1-201ENST00000263578 KCNJ14Q9UNX9 436 aa18.15■□□□□ 0.5
FOXRED1-201ENST00000263578 ATF5Q9Y2D1 282 aaPredicted RBP18.15■□□□□ 0.5
FOXRED1-201ENST00000263578 CLIC4Q9Y696 253 aa18.15■□□□□ 0.5
FOXRED1-201ENST00000263578 ME1P48163 572 aa18.14■□□□□ 0.49
FOXRED1-201ENST00000263578 NFIAQ12857 509 aa18.14■□□□□ 0.49
FOXRED1-201ENST00000263578 GRM4Q14833 912 aa18.14■□□□□ 0.49
FOXRED1-201ENST00000263578 ANO1Q5XXA6 986 aa18.14■□□□□ 0.49
FOXRED1-201ENST00000263578 KLHL34Q8N239 644 aa18.14■□□□□ 0.49
FOXRED1-201ENST00000263578 LARGE2Q8N3Y3 721 aa18.14■□□□□ 0.49
FOXRED1-201ENST00000263578 TMEM47Q9BQJ4 181 aa18.14■□□□□ 0.49
FOXRED1-201ENST00000263578 DDX19AQ9NUU7 478 aaKnown RBP18.14■□□□□ 0.49
FOXRED1-201ENST00000263578 SWAP70Q9UH65 585 aa18.14■□□□□ 0.49
FOXRED1-201ENST00000263578 V9GY48 417 aaPredicted RBP18.14■□□□□ 0.49
FOXRED1-201ENST00000263578 SIPA1L1O43166 1804 aa18.14■□□□□ 0.49
FOXRED1-201ENST00000263578 MYO3BQ8WXR4 1341 aa18.14■□□□□ 0.49
FOXRED1-201ENST00000263578 COL4A5P29400 1685 aa18.14■□□□□ 0.49
FOXRED1-201ENST00000263578 NOSTRINQ8IVI9 506 aa18.13■□□□□ 0.49
FOXRED1-201ENST00000263578 VPS33BQ9H267 617 aa18.13■□□□□ 0.49
FOXRED1-201ENST00000263578 FOXP1Q9H334 677 aaPredicted RBP18.13■□□□□ 0.49
FOXRED1-201ENST00000263578 TSPY26PQ9H489 355 aa18.13■□□□□ 0.49
FOXRED1-201ENST00000263578 ZNF277Q9NRM2 450 aaPredicted RBP18.13■□□□□ 0.49
FOXRED1-201ENST00000263578 DACT1Q9NYF0 836 aa18.13■□□□□ 0.49
FOXRED1-201ENST00000263578 PIM2Q9P1W9 311 aa18.13■□□□□ 0.49
FOXRED1-201ENST00000263578 PCDHAC2Q9Y5I4 1007 aa18.13■□□□□ 0.49
FOXRED1-201ENST00000263578 IDI2Q9BXS1 227 aa18.13■□□□□ 0.49
FOXRED1-201ENST00000263578 PANK2Q9BZ23 570 aa18.13■□□□□ 0.49
FOXRED1-201ENST00000263578 NUP62CLQ9H1M0 184 aa18.13■□□□□ 0.49
FOXRED1-201ENST00000263578 BAZ2BQ9UIF8 2168 aaKnown RBP18.12■□□□□ 0.49
FOXRED1-201ENST00000263578 hCG_1642624A0A1W2PR95 340 aa18.12■□□□□ 0.49
FOXRED1-201ENST00000263578 BTBD18B2RXH4 712 aa18.12■□□□□ 0.49
FOXRED1-201ENST00000263578 GNAQP50148 359 aa18.12■□□□□ 0.49
FOXRED1-201ENST00000263578 SF3A1Q15459 793 aaKnown RBP18.12■□□□□ 0.49
FOXRED1-201ENST00000263578 CEP95Q96GE4 821 aa18.12■□□□□ 0.49
FOXRED1-201ENST00000263578 RBSNQ9H1K0 784 aa18.12■□□□□ 0.49
FOXRED1-201ENST00000263578 EHD4Q9H223 541 aa18.12■□□□□ 0.49
FOXRED1-201ENST00000263578 VPS54Q9P1Q0 977 aa18.12■□□□□ 0.49
FOXRED1-201ENST00000263578 GREB1LQ9C091 1923 aaPredicted RBP18.12■□□□□ 0.49
FOXRED1-201ENST00000263578 FER1L6Q2WGJ9 1857 aa18.12■□□□□ 0.49
FOXRED1-201ENST00000263578 GOLGB1Q14789 3259 aaKnown RBP18.12■□□□□ 0.49
FOXRED1-201ENST00000263578 SPTLC2O15270 562 aa18.11■□□□□ 0.49
FOXRED1-201ENST00000263578 NOVP48745 357 aa18.11■□□□□ 0.49
FOXRED1-201ENST00000263578 RSBN1LQ6PCB5 846 aaPredicted RBP18.11■□□□□ 0.49
FOXRED1-201ENST00000263578 PCDHA7Q9UN72 937 aa18.11■□□□□ 0.49
FOXRED1-201ENST00000263578 NR1I2O75469 434 aa18.11■□□□□ 0.49
FOXRED1-201ENST00000263578 NPM3O75607 178 aaKnown RBP18.11■□□□□ 0.49
FOXRED1-201ENST00000263578 TOP1P11387 765 aaKnown RBP18.11■□□□□ 0.49
FOXRED1-201ENST00000263578 CACNB3P54284 484 aa18.11■□□□□ 0.49
FOXRED1-201ENST00000263578 CCAR1Q8IX12 1150 aaKnown RBP18.11■□□□□ 0.49
FOXRED1-201ENST00000263578 SHISA4Q96DD7 197 aa18.11■□□□□ 0.49
FOXRED1-201ENST00000263578 PHF20Q9BVI0 1012 aa18.11■□□□□ 0.49
FOXRED1-201ENST00000263578 DHX36Q9H2U1 1008 aaKnown RBP18.11■□□□□ 0.49
FOXRED1-201ENST00000263578 MAD2L2Q9UI95 211 aa18.11■□□□□ 0.49
FOXRED1-201ENST00000263578 SCG2P13521 617 aa18.1■□□□□ 0.49
FOXRED1-201ENST00000263578 CFAP100Q494V2 611 aa18.1■□□□□ 0.49
FOXRED1-201ENST00000263578 CCDC73Q6ZRK6 1079 aa18.1■□□□□ 0.49
FOXRED1-201ENST00000263578 CLSTN2Q9H4D0 955 aa18.1■□□□□ 0.49
FOXRED1-201ENST00000263578 FAM198AQ9UFP1 575 aa18.1■□□□□ 0.49
FOXRED1-201ENST00000263578 A0A1W2PQ27 194 aa18.1■□□□□ 0.49
FOXRED1-201ENST00000263578 A0A1W2PQ64 194 aa18.1■□□□□ 0.49
FOXRED1-201ENST00000263578 A0A1W2PQD8 194 aa18.1■□□□□ 0.49
FOXRED1-201ENST00000263578 PSMD14O00487 310 aa18.1■□□□□ 0.49
FOXRED1-201ENST00000263578 AKR1B1P15121 316 aa18.1■□□□□ 0.49
FOXRED1-201ENST00000263578 SHMT1P34896 483 aa18.1■□□□□ 0.49
FOXRED1-201ENST00000263578 R3HDM1Q15032 1099 aaKnown RBP18.1■□□□□ 0.49
FOXRED1-201ENST00000263578 SLC39A14Q15043 492 aa18.1■□□□□ 0.49
FOXRED1-201ENST00000263578 PFKFB3Q16875 520 aaPredicted RBP18.1■□□□□ 0.49
FOXRED1-201ENST00000263578 DALRD3Q5D0E6 543 aaKnown RBP18.1■□□□□ 0.49
FOXRED1-201ENST00000263578 ADALQ6DHV7 355 aa18.1■□□□□ 0.49
FOXRED1-201ENST00000263578 ZFPM1Q8IX07 1006 aa18.1■□□□□ 0.49
FOXRED1-201ENST00000263578 STAG2Q8N3U4 1231 aa18.1■□□□□ 0.49
FOXRED1-201ENST00000263578 RAD17O75943 681 aa18.09■□□□□ 0.49
FOXRED1-201ENST00000263578 VIL1P09327 827 aaKnown RBP18.09■□□□□ 0.49
FOXRED1-201ENST00000263578 KRT2P35908 639 aa18.09■□□□□ 0.49
FOXRED1-201ENST00000263578 TCP10Q12799 353 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms