RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 GTF3C6Q969F1 213 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 DCPSQ96C86 337 aaKnown RBP12.31□□□□□ -0.44
KNOP1-201ENST00000219837 SUCLG2Q96I99 432 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 NDUFB9Q9Y6M9 179 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 ZNF131P52739 623 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 YARSP54577 528 aaKnown RBP12.31□□□□□ -0.44
KNOP1-201ENST00000219837 APPBP2Q92624 585 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 GLG1Q92896 1179 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 SECISBP2LQ93073 1101 aaKnown RBP12.31□□□□□ -0.44
KNOP1-201ENST00000219837 FAM227BQ96M60 508 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 DBNDD2Q9BQY9 259 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 SWAP70Q9UH65 585 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 GCKRQ14397 625 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 STIM2Q9P246 746 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 CUTAO60888 179 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 CD19P15391 556 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 KCNA6P17658 529 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 MAN1A1P33908 653 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 NUP58Q9BVL2 599 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 ANGEL1Q9UNK9 670 aaKnown RBP12.31□□□□□ -0.44
KNOP1-201ENST00000219837 KCNJ14Q9UNX9 436 aa12.31□□□□□ -0.44
KNOP1-201ENST00000219837 ACTN4O43707 911 aaKnown RBP12.3□□□□□ -0.44
KNOP1-201ENST00000219837 STAM2O75886 525 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 TUBB4BP68371 445 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 LACTBP83111 547 aaPredicted RBP12.3□□□□□ -0.44
KNOP1-201ENST00000219837 NAA25Q14CX7 972 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 RSPH3Q86UC2 560 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 LSM14BQ9BX40 385 aaKnown RBP12.3□□□□□ -0.44
KNOP1-201ENST00000219837 SNX14Q9Y5W7 946 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 POLR3AO14802 1390 aaPredicted RBP12.3□□□□□ -0.44
KNOP1-201ENST00000219837 ATP10BO94823 1461 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 TBC1D8O95759 1140 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 GTF2IP78347 998 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 DOK7Q18PE1 504 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 ASIC3Q9UHC3 531 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 GOLGA6CA6NDK9 693 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 GOLGA6BA6NDN3 693 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 RIOK3O14730 519 aaKnown RBP12.3□□□□□ -0.44
KNOP1-201ENST00000219837 GOLGA6DP0CG33 693 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 ZAP70P43403 619 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 NLRP12P59046 1061 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 YWHAEP62258 255 aaKnown RBP12.3□□□□□ -0.44
KNOP1-201ENST00000219837 SND1Q7KZF4 910 aaKnown RBP eCLIP12.3□□□□□ -0.44
KNOP1-201ENST00000219837 TAOK1Q7L7X3 1001 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 RDH13Q8NBN7 331 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 GOLGA6AQ9NYA3 693 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 SPDYE16A6NNV3 312 aaPredicted RBP12.3□□□□□ -0.44
KNOP1-201ENST00000219837 GBP1P32455 592 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 SPDYE2Q495Y8 402 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 HERC4Q5GLZ8 1057 aaPredicted RBP12.3□□□□□ -0.44
KNOP1-201ENST00000219837 SBNO1A3KN83 1393 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 COL17A1Q9UMD9 1497 aaPredicted RBP12.3□□□□□ -0.44
KNOP1-201ENST00000219837 SFMBT2Q5VUG0 894 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 KLHL7Q8IXQ5 586 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 MMS19Q96T76 1030 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 LGR6Q9HBX8 967 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 TAB2Q9NYJ8 693 aa12.3□□□□□ -0.44
KNOP1-201ENST00000219837 BSPRYQ5W0U4 402 aa12.29□□□□□ -0.44
KNOP1-201ENST00000219837 C2CD5Q86YS7 1000 aa12.29□□□□□ -0.44
KNOP1-201ENST00000219837 TTF2Q9UNY4 1162 aaKnown RBP12.29□□□□□ -0.44
KNOP1-201ENST00000219837 KIAA0556O60303 1618 aa12.29□□□□□ -0.44
KNOP1-201ENST00000219837 PPARAQ07869 468 aa12.29□□□□□ -0.44
KNOP1-201ENST00000219837 KDRP35968 1356 aa12.29□□□□□ -0.44
KNOP1-201ENST00000219837 BAG6P46379 1132 aa12.29□□□□□ -0.44
KNOP1-201ENST00000219837 CTSWP56202 376 aa12.29□□□□□ -0.44
KNOP1-201ENST00000219837 TMCO4Q5TGY1 634 aa12.29□□□□□ -0.44
KNOP1-201ENST00000219837 GAS7O60861 476 aa12.29□□□□□ -0.44
KNOP1-201ENST00000219837 ARID4AP29374 1257 aaPredicted RBP12.29□□□□□ -0.44
KNOP1-201ENST00000219837 AFAP1L1Q8TED9 768 aa12.29□□□□□ -0.44
KNOP1-201ENST00000219837 TRAPPC8Q9Y2L5 1435 aa12.29□□□□□ -0.44
KNOP1-201ENST00000219837 KDM5AP29375 1690 aaKnown RBP12.29□□□□□ -0.44
KNOP1-201ENST00000219837 I3L4J1 428 aa12.29□□□□□ -0.44
KNOP1-201ENST00000219837 CYP2J2P51589 502 aa12.29□□□□□ -0.44
KNOP1-201ENST00000219837 SCYL2Q6P3W7 929 aa12.29□□□□□ -0.44
KNOP1-201ENST00000219837 SYCE1Q8N0S2 351 aa12.29□□□□□ -0.44
KNOP1-201ENST00000219837 RSAD2Q8WXG1 361 aa12.29□□□□□ -0.44
KNOP1-201ENST00000219837 MAP3K19Q56UN5 1328 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 SCNN1DP51172 638 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 KIF11P52732 1056 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 PSMD6Q15008 389 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 C8orf34Q49A92 452 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 SLC9C1Q4G0N8 1177 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 HHATQ5VTY9 493 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 IFT20Q8IY31 132 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 LLPHQ9BRT6 129 aaKnown RBP12.28□□□□□ -0.44
KNOP1-201ENST00000219837 USP19O94966 1318 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 KDM3AQ9Y4C1 1321 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 CSPG5O95196 566 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 IGBP1P78318 339 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 POSTNQ15063 836 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 TTC31Q49AM3 519 aaPredicted RBP12.28□□□□□ -0.44
KNOP1-201ENST00000219837 OTUD7BQ6GQQ9 843 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 ARPP21Q9UBL0 812 aaPredicted RBP12.28□□□□□ -0.44
KNOP1-201ENST00000219837 EBAG9O00559 213 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 TFAP4Q01664 338 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 TEKT1Q969V4 418 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 VPS54Q9P1Q0 977 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 SMCO2A6NFE2 343 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 LIG4P49917 911 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 NEDD9Q14511 834 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms