RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Pcdhb5Q91XZ5 792 aa17.1■□□□□ 0.33
Trim11-203ENSMUST00000108810 Krt23Q99PS0 422 aa17.1■□□□□ 0.33
Trim11-203ENSMUST00000108810 Myoz2Q9JJW5 264 aa17.1■□□□□ 0.33
Trim11-203ENSMUST00000108810 Klrc1Q9Z202 244 aa17.1■□□□□ 0.33
Trim11-203ENSMUST00000108810 VirmaA2AIV2 1811 aaKnown RBP17.1■□□□□ 0.33
Trim11-203ENSMUST00000108810 Sycp2lA0A0M3U1B0 842 aa17.09■□□□□ 0.33
Trim11-203ENSMUST00000108810 Kif23E9Q5G3 953 aa17.09■□□□□ 0.33
Trim11-203ENSMUST00000108810 PparaP23204 468 aa17.09■□□□□ 0.33
Trim11-203ENSMUST00000108810 Fam178bQ24JP3 464 aa17.09■□□□□ 0.33
Trim11-203ENSMUST00000108810 Tbc1d31Q6NXY1 996 aa17.09■□□□□ 0.33
Trim11-203ENSMUST00000108810 Stac3Q8BZ71 360 aa17.09■□□□□ 0.33
Trim11-203ENSMUST00000108810 Luzp1Q8R4U7 1068 aaKnown RBP17.09■□□□□ 0.33
Trim11-203ENSMUST00000108810 Mtmr2Q9Z2D1 643 aa17.09■□□□□ 0.33
Trim11-203ENSMUST00000108810 Gjb4Q02738 266 aa17.09■□□□□ 0.33
Trim11-203ENSMUST00000108810 Smc2Q8CG48 1191 aaKnown RBP17.09■□□□□ 0.33
Trim11-203ENSMUST00000108810 Sox30Q8CGW4 782 aa17.09■□□□□ 0.33
Trim11-203ENSMUST00000108810 Apobec3Q99J72 440 aaKnown RBP17.09■□□□□ 0.33
Trim11-203ENSMUST00000108810 MbipQ99LQ1 341 aa17.09■□□□□ 0.33
Trim11-203ENSMUST00000108810 Ush1cQ9ES64 910 aa17.09■□□□□ 0.33
Trim11-203ENSMUST00000108810 Bin1O08539 588 aaKnown RBP17.08■□□□□ 0.33
Trim11-203ENSMUST00000108810 Gas2l3Q3UWW6 683 aa17.08■□□□□ 0.33
Trim11-203ENSMUST00000108810 Ces3aQ63880 571 aa17.08■□□□□ 0.33
Trim11-203ENSMUST00000108810 Atp2b4Q6Q477 1205 aa17.08■□□□□ 0.33
Trim11-203ENSMUST00000108810 Ccp110Q7TSH4 1004 aa17.08■□□□□ 0.33
Trim11-203ENSMUST00000108810 Trmt2aQ8BNV1 574 aaKnown RBP17.08■□□□□ 0.33
Trim11-203ENSMUST00000108810 Ces3bQ8VCU1 571 aa17.08■□□□□ 0.33
Trim11-203ENSMUST00000108810 Myo1hQ9D6A1 958 aa17.08■□□□□ 0.33
Trim11-203ENSMUST00000108810 Syt10Q9R0N4 523 aa17.08■□□□□ 0.33
Trim11-203ENSMUST00000108810 Frmpd3A0A140LIW3 1774 aa17.08■□□□□ 0.32
Trim11-203ENSMUST00000108810 Plxnb2B2RXS4 1842 aa17.08■□□□□ 0.32
Trim11-203ENSMUST00000108810 Zscan18E9PUD6 809 aa17.08■□□□□ 0.32
Trim11-203ENSMUST00000108810 Vmn2r68L7N2B3 851 aa17.08■□□□□ 0.32
Trim11-203ENSMUST00000108810 Alppl2P24823 529 aa17.08■□□□□ 0.32
Trim11-203ENSMUST00000108810 Usp49Q6P9L4 685 aa17.08■□□□□ 0.32
Trim11-203ENSMUST00000108810 Tas2r124Q7M718 309 aa17.08■□□□□ 0.32
Trim11-203ENSMUST00000108810 Clec16aQ80U30 1036 aa17.08■□□□□ 0.32
Trim11-203ENSMUST00000108810 Znf18Q810A1 556 aa17.08■□□□□ 0.32
Trim11-203ENSMUST00000108810 Csrnp2Q8BGQ2 534 aa17.08■□□□□ 0.32
Trim11-203ENSMUST00000108810 Ano10Q8BH79 659 aa17.08■□□□□ 0.32
Trim11-203ENSMUST00000108810 Kri1Q8VDQ9 704 aaKnown RBP17.08■□□□□ 0.32
Trim11-203ENSMUST00000108810 Chrna2Q91X60 512 aa17.08■□□□□ 0.32
Trim11-203ENSMUST00000108810 Filip1Q9CS72 1211 aa17.08■□□□□ 0.32
Trim11-203ENSMUST00000108810 Ptf1aQ9QX98 324 aa17.08■□□□□ 0.32
Trim11-203ENSMUST00000108810 Zfp646Q6NV66 1788 aa17.08■□□□□ 0.32
Trim11-203ENSMUST00000108810 AaasP58742 546 aa17.07■□□□□ 0.32
Trim11-203ENSMUST00000108810 Apba2P98084 750 aa17.07■□□□□ 0.32
Trim11-203ENSMUST00000108810 Klhdc9Q3USL1 350 aa17.07■□□□□ 0.32
Trim11-203ENSMUST00000108810 Tacc1Q6Y685 774 aa17.07■□□□□ 0.32
Trim11-203ENSMUST00000108810 Kcnk13Q8R1P5 405 aa17.07■□□□□ 0.32
Trim11-203ENSMUST00000108810 RabggtaQ9JHK4 567 aa17.07■□□□□ 0.32
Trim11-203ENSMUST00000108810 Cd2apQ9JLQ0 637 aa17.07■□□□□ 0.32
Trim11-203ENSMUST00000108810 GnaqP21279 359 aa17.07■□□□□ 0.32
Trim11-203ENSMUST00000108810 Eef2P58252 858 aaKnown RBP17.07■□□□□ 0.32
Trim11-203ENSMUST00000108810 Tbc1d2bQ3U0J8 965 aa17.07■□□□□ 0.32
Trim11-203ENSMUST00000108810 Ift122Q6NWV3 1182 aa17.07■□□□□ 0.32
Trim11-203ENSMUST00000108810 Cep120Q7TSG1 988 aa17.07■□□□□ 0.32
Trim11-203ENSMUST00000108810 Ctdspl2Q8BG15 465 aa17.07■□□□□ 0.32
Trim11-203ENSMUST00000108810 Rbm19Q8R3C6 952 aaKnown RBP17.07■□□□□ 0.32
Trim11-203ENSMUST00000108810 Akap8Q9DBR0 687 aaKnown RBP17.07■□□□□ 0.32
Trim11-203ENSMUST00000108810 Hip1rQ9JKY5 1068 aa17.07■□□□□ 0.32
Trim11-203ENSMUST00000108810 Becn1O88597 448 aa17.06■□□□□ 0.32
Trim11-203ENSMUST00000108810 Grin2dQ03391 1323 aa17.06■□□□□ 0.32
Trim11-203ENSMUST00000108810 Armc2Q3URY6 854 aa17.06■□□□□ 0.32
Trim11-203ENSMUST00000108810 C87499Q3UX49 493 aa17.06■□□□□ 0.32
Trim11-203ENSMUST00000108810 PRAG1Q571I4 1179 aa17.06■□□□□ 0.32
Trim11-203ENSMUST00000108810 Nsrp1Q5NCR9 542 aa17.06■□□□□ 0.32
Trim11-203ENSMUST00000108810 Cep85Q8BMK0 761 aa17.06■□□□□ 0.32
Trim11-203ENSMUST00000108810 Lrrd1Q8C0R9 853 aa17.06■□□□□ 0.32
Trim11-203ENSMUST00000108810 Tango6Q8C3S2 1079 aa17.06■□□□□ 0.32
Trim11-203ENSMUST00000108810 Nop14Q8R3N1 860 aaKnown RBP17.06■□□□□ 0.32
Trim11-203ENSMUST00000108810 Xrcc4Q924T3 326 aa17.06■□□□□ 0.32
Trim11-203ENSMUST00000108810 Vcam1P29533 739 aa17.05■□□□□ 0.32
Trim11-203ENSMUST00000108810 Nap1l2P51860 460 aa17.05■□□□□ 0.32
Trim11-203ENSMUST00000108810 Usp5P56399 858 aaKnown RBP17.05■□□□□ 0.32
Trim11-203ENSMUST00000108810 Kiaa1468Q148V7 1216 aa17.05■□□□□ 0.32
Trim11-203ENSMUST00000108810 Gga3Q8BMI3 718 aa17.05■□□□□ 0.32
Trim11-203ENSMUST00000108810 Wdr64Q9D565 1086 aa17.05■□□□□ 0.32
Trim11-203ENSMUST00000108810 Ubxn8Q9QZ49 277 aa17.05■□□□□ 0.32
Trim11-203ENSMUST00000108810 Psmd10Q9Z2X2 231 aa17.05■□□□□ 0.32
Trim11-203ENSMUST00000108810 Acad12D3Z7X0 555 aa17.05■□□□□ 0.32
Trim11-203ENSMUST00000108810 Gucy1a2F8VQK3 730 aa17.05■□□□□ 0.32
Trim11-203ENSMUST00000108810 Rad23bP54728 416 aa17.05■□□□□ 0.32
Trim11-203ENSMUST00000108810 Mdh1bQ5F204 500 aa17.05■□□□□ 0.32
Trim11-203ENSMUST00000108810 GnptabQ69ZN6 1235 aa17.05■□□□□ 0.32
Trim11-203ENSMUST00000108810 Hexim1Q8R409 356 aaKnown RBP17.05■□□□□ 0.32
Trim11-203ENSMUST00000108810 Iqca1Q9CUL5 857 aa17.05■□□□□ 0.32
Trim11-203ENSMUST00000108810 A430078G23RikE9Q7Y4 484 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 MarcksP26645 309 aaKnown RBP17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 Slc7a1Q09143 622 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 Trappc10Q3TLI0 1259 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 Usp13Q5BKP2 858 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 Vps53Q8CCB4 832 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 Nrbp1Q99J45 535 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 Polr2dQ9D7M8 142 aaKnown RBP17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 A0A1W2P6Q8 802 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 Gm9048A0A1W2P7H4 802 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 A0A1W2P7Z8 802 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 Gm9046A0A1W2P855 802 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 Tex13cD3YU32 604 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 Ifi207E9Q3L4 978 aa17.04■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 68.3 ms