RNA–Protein interactions for RNA: ENSMUST00000213874.1

Usp28-203, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp28, Length 4,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-203ENSMUST00000213874 Gm11563B1AQ90 168 aa3.11□□□□□ -1.91
Usp28-203ENSMUST00000213874 Gm11595B1AQA7 289 aa3.11□□□□□ -1.91
Usp28-203ENSMUST00000213874 Krtap4-8B1AQA8 209 aa3.11□□□□□ -1.91
Usp28-203ENSMUST00000213874 Gm10142J3KMP7 120 aa3.08□□□□□ -1.92
Usp28-203ENSMUST00000213874 Lce3cQ91V05 98 aa3.08□□□□□ -1.92
Usp28-203ENSMUST00000213874 Lce1fB9EJP6 147 aa3.07□□□□□ -1.92
Usp28-203ENSMUST00000213874 Lce1a1Q9CQH5 143 aa3.07□□□□□ -1.92
Usp28-203ENSMUST00000213874 Macf1Q9QXZ0 7354 aaKnown RBP3.06□□□□□ -1.92
Usp28-203ENSMUST00000213874 Krtap4-9B1AQA9 244 aa3.04□□□□□ -1.92
Usp28-203ENSMUST00000213874 Sprr2iO70560 76 aa3.03□□□□□ -1.92
Usp28-203ENSMUST00000213874 Lce3dE9Q8V1 98 aa3.03□□□□□ -1.93
Usp28-203ENSMUST00000213874 Mt4P47945 62 aa3.02□□□□□ -1.93
Usp28-203ENSMUST00000213874 ObscnA2AAJ9 8891 aaKnown RBP3.02□□□□□ -1.93
Usp28-203ENSMUST00000213874 Sprr2dO70555 85 aa3.01□□□□□ -1.93
Usp28-203ENSMUST00000213874 Lce3eF8VQJ0 98 aa3□□□□□ -1.93
Usp28-203ENSMUST00000213874 Lce3fQ6PAI4 98 aa3□□□□□ -1.93
Usp28-203ENSMUST00000213874 Sprr2kO70562 68 aa3□□□□□ -1.93
Usp28-203ENSMUST00000213874 A0A1Y7VJH8 109 aa2.97□□□□□ -1.93
Usp28-203ENSMUST00000213874 Krtap4-16Q91W93 202 aa2.97□□□□□ -1.93
Usp28-203ENSMUST00000213874 Krtap4-13Q9D7P3 165 aa2.94□□□□□ -1.94
Usp28-203ENSMUST00000213874 Krtap28-10A0A1Y7VP58 119 aa2.93□□□□□ -1.94
Usp28-203ENSMUST00000213874 Muc19Q6PZE0 7524 aa2.92□□□□□ -1.94
Usp28-203ENSMUST00000213874 Sprr2fO70557 76 aa2.91□□□□□ -1.94
Usp28-203ENSMUST00000213874 Gm7544A0A1Y7VJ58 118 aa2.89□□□□□ -1.95
Usp28-203ENSMUST00000213874 Lce3aQ497I5 98 aa2.88□□□□□ -1.95
Usp28-203ENSMUST00000213874 Lce1lQ9D1G7 135 aa2.87□□□□□ -1.95
Usp28-203ENSMUST00000213874 A030003K21RikA0A1Y7VIM3 128 aa2.85□□□□□ -1.95
Usp28-203ENSMUST00000213874 A030005L19RikA0A1Y7VIU2 113 aa2.83□□□□□ -1.96
Usp28-203ENSMUST00000213874 Lce1bQ9D149 137 aa2.83□□□□□ -1.96
Usp28-203ENSMUST00000213874 Krtap6-3A0A087WQL6 57 aa2.83□□□□□ -1.96
Usp28-203ENSMUST00000213874 2300003K06RikA2A4M0 262 aa2.82□□□□□ -1.96
Usp28-203ENSMUST00000213874 Krtap4-7Q9D732 168 aa2.78□□□□□ -1.96
Usp28-203ENSMUST00000213874 Krtap19-4Q925H7 84 aa2.76□□□□□ -1.97
Usp28-203ENSMUST00000213874 Sprr2hO70559 108 aa2.75□□□□□ -1.97
Usp28-203ENSMUST00000213874 Sprr2eO70556 76 aa2.75□□□□□ -1.97
Usp28-203ENSMUST00000213874 Gm6217A0A1Y7VJK9 128 aa2.74□□□□□ -1.97
Usp28-203ENSMUST00000213874 A030005K14RikA0A1Y7VNY1 122 aa2.72□□□□□ -1.97
Usp28-203ENSMUST00000213874 DstQ91ZU6 7393 aaKnown RBP2.71□□□□□ -1.98
Usp28-203ENSMUST00000213874 Gm10024A0A0A0MQA4 119 aa2.7□□□□□ -1.98
Usp28-203ENSMUST00000213874 Lce1kJ3QP15 125 aa2.7□□□□□ -1.98
Usp28-203ENSMUST00000213874 Krtap28-13A0A087WQP5 138 aa2.69□□□□□ -1.98
Usp28-203ENSMUST00000213874 Kmt2dQ6PDK2 5588 aa2.58□□□□□ -2
Usp28-203ENSMUST00000213874 Krtap20-2E9Q0A8 60 aa2.56□□□□□ -2
Usp28-203ENSMUST00000213874 NebE9Q1W3 7152 aa2.46□□□□□ -2.01
Usp28-203ENSMUST00000213874 Gm11554B1AQB2 190 aa2.46□□□□□ -2.02
Usp28-203ENSMUST00000213874 Mt1P02802 61 aaKnown RBP2.43□□□□□ -2.02
Usp28-203ENSMUST00000213874 A0A1Y7VJ07 166 aa2.41□□□□□ -2.02
Usp28-203ENSMUST00000213874 Eppk1Q8R0W0 6548 aa2.4□□□□□ -2.02
Usp28-203ENSMUST00000213874 Gpr98Q8VHN7 6298 aaKnown RBP2.36□□□□□ -2.03
Usp28-203ENSMUST00000213874 Gm11559Q9D3H7 191 aa2.35□□□□□ -2.03
Usp28-203ENSMUST00000213874 Hmcn1D3YXG0 5634 aa2.34□□□□□ -2.04
Usp28-203ENSMUST00000213874 Gm11639A0A1D5RLM8 5808 aa2.32□□□□□ -2.04
Usp28-203ENSMUST00000213874 Krtap5-2Q9D5Z7 189 aa2.3□□□□□ -2.04
Usp28-203ENSMUST00000213874 Gm11568A2A4M2 211 aa2.27□□□□□ -2.05
Usp28-203ENSMUST00000213874 Krtap9-1Q64526 186 aa2.27□□□□□ -2.05
Usp28-203ENSMUST00000213874 Gm4553A0A1B0GSA9 284 aa2.21□□□□□ -2.06
Usp28-203ENSMUST00000213874 A0A286YCP9 139 aa2.2□□□□□ -2.06
Usp28-203ENSMUST00000213874 Mt3P28184 68 aa2.2□□□□□ -2.06
Usp28-203ENSMUST00000213874 Gm2431E9Q8S1 172 aa2.16□□□□□ -2.06
Usp28-203ENSMUST00000213874 A030014E15RikA0A1Y7VJV2 120 aa2.15□□□□□ -2.06
Usp28-203ENSMUST00000213874 Gm45337A0A1B0GS71 263 aa2.07□□□□□ -2.08
Usp28-203ENSMUST00000213874 Gm10153A0A1B0GRL1 320 aa2.03□□□□□ -2.08
Usp28-203ENSMUST00000213874 Gm40460A0A1B0GR10 244 aa1.98□□□□□ -2.09
Usp28-203ENSMUST00000213874 Gm7579A0A1B0GRJ4 243 aa1.98□□□□□ -2.09
Usp28-203ENSMUST00000213874 Krtap5-5Q2TA51 241 aa1.98□□□□□ -2.09
Usp28-203ENSMUST00000213874 Krtap5-4Q62220 223 aa1.98□□□□□ -2.09
Usp28-203ENSMUST00000213874 Gm39115A0A1B0GSH7 232 aa1.97□□□□□ -2.09
Usp28-203ENSMUST00000213874 1110025L11RikO09048 78 aa1.89□□□□□ -2.11
Usp28-203ENSMUST00000213874 Krtap6-5Q925H3 78 aa1.89□□□□□ -2.11
Usp28-203ENSMUST00000213874 AhnakE9Q616 5656 aaKnown RBP1.88□□□□□ -2.11
Usp28-203ENSMUST00000213874 Gm45618A0A1B0GSA0 219 aa1.87□□□□□ -2.11
Usp28-203ENSMUST00000213874 Sprr2bO70554 98 aa1.81□□□□□ -2.12
Usp28-203ENSMUST00000213874 Phgr1Q8K0G7 91 aa1.76□□□□□ -2.13
Usp28-203ENSMUST00000213874 Gm10229O08631 77 aa1.71□□□□□ -2.14
Usp28-203ENSMUST00000213874 Gm11567Q9D141 195 aa1.55□□□□□ -2.16
Usp28-203ENSMUST00000213874 Krtap21-1Q925H4 128 aa1.5□□□□□ -2.17
Usp28-203ENSMUST00000213874 Gm29735A0A1B0GT06 219 aa1.44□□□□□ -2.18
Usp28-203ENSMUST00000213874 Krtap6-2O08884 159 aa1.42□□□□□ -2.18
Usp28-203ENSMUST00000213874 Krtap5-1Q64507 230 aa1.21□□□□□ -2.22
Usp28-203ENSMUST00000213874 Gm4559A4IF42 199 aa0.91□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 103.8 ms