RNA–Protein interactions for RNA: ENSMUST00000199171.4

Sox2ot-215, mousemouse

TSL 1 (best) BASIC

Gene Sox2ot, Length 3,486 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2ot-215ENSMUST00000199171 Krtap9-3Q3V2C1 136 aa3□□□□□ -1.93
Sox2ot-215ENSMUST00000199171 Gm11596B1AQB0 205 aa3□□□□□ -1.93
Sox2ot-215ENSMUST00000199171 Lce1lQ9D1G7 135 aa2.99□□□□□ -1.93
Sox2ot-215ENSMUST00000199171 Lce1hQ9D6R3 140 aa2.98□□□□□ -1.93
Sox2ot-215ENSMUST00000199171 Sprr2gO70558 76 aa2.94□□□□□ -1.94
Sox2ot-215ENSMUST00000199171 Gm11564A2A4L9 201 aa2.92□□□□□ -1.94
Sox2ot-215ENSMUST00000199171 Gm11595B1AQA7 289 aa2.92□□□□□ -1.94
Sox2ot-215ENSMUST00000199171 Krtap4-8B1AQA8 209 aa2.92□□□□□ -1.94
Sox2ot-215ENSMUST00000199171 Mt4P47945 62 aa2.91□□□□□ -1.94
Sox2ot-215ENSMUST00000199171 Krtap22-2J3QNX6 67 aa2.91□□□□□ -1.94
Sox2ot-215ENSMUST00000199171 Krtap4-9B1AQA9 244 aa2.88□□□□□ -1.95
Sox2ot-215ENSMUST00000199171 Sprr2dO70555 85 aa2.85□□□□□ -1.95
Sox2ot-215ENSMUST00000199171 Lce1eQ9D139 143 aa2.84□□□□□ -1.95
Sox2ot-215ENSMUST00000199171 Sprr2kO70562 68 aa2.84□□□□□ -1.96
Sox2ot-215ENSMUST00000199171 Gm11938Q9D3H4 131 aa2.81□□□□□ -1.96
Sox2ot-215ENSMUST00000199171 Gm10272F7CZ33 110 aa2.81□□□□□ -1.96
Sox2ot-215ENSMUST00000199171 Krtap4-13Q9D7P3 165 aa2.8□□□□□ -1.96
Sox2ot-215ENSMUST00000199171 Gm10100J3QK64 120 aa2.73□□□□□ -1.97
Sox2ot-215ENSMUST00000199171 2300003K06RikA2A4M0 262 aa2.72□□□□□ -1.97
Sox2ot-215ENSMUST00000199171 Krtap19-4Q925H7 84 aa2.72□□□□□ -1.97
Sox2ot-215ENSMUST00000199171 Lce3bQ9CQM7 98 aa2.69□□□□□ -1.98
Sox2ot-215ENSMUST00000199171 Gm10142J3KMP7 120 aa2.68□□□□□ -1.98
Sox2ot-215ENSMUST00000199171 Syne1Q6ZWR6 8799 aa2.66□□□□□ -1.98
Sox2ot-215ENSMUST00000199171 Lce1cQ9D1C5 147 aa2.63□□□□□ -1.99
Sox2ot-215ENSMUST00000199171 Lce1bQ9D149 137 aa2.62□□□□□ -1.99
Sox2ot-215ENSMUST00000199171 Macf1Q9QXZ0 7354 aaKnown RBP2.59□□□□□ -1.99
Sox2ot-215ENSMUST00000199171 Sprr2iO70560 76 aa2.59□□□□□ -1.99
Sox2ot-215ENSMUST00000199171 Lce3cQ91V05 98 aa2.59□□□□□ -2
Sox2ot-215ENSMUST00000199171 Eppk1Q8R0W0 6548 aa2.57□□□□□ -2
Sox2ot-215ENSMUST00000199171 Lce3dE9Q8V1 98 aa2.57□□□□□ -2
Sox2ot-215ENSMUST00000199171 Lce1fB9EJP6 147 aa2.55□□□□□ -2
Sox2ot-215ENSMUST00000199171 Lce3eF8VQJ0 98 aa2.52□□□□□ -2.01
Sox2ot-215ENSMUST00000199171 Lce3fQ6PAI4 98 aa2.52□□□□□ -2.01
Sox2ot-215ENSMUST00000199171 Krtap6-3A0A087WQL6 57 aa2.51□□□□□ -2.01
Sox2ot-215ENSMUST00000199171 Lce1kJ3QP15 125 aa2.51□□□□□ -2.01
Sox2ot-215ENSMUST00000199171 Sprr2eO70556 76 aa2.5□□□□□ -2.01
Sox2ot-215ENSMUST00000199171 Sprr2fO70557 76 aa2.5□□□□□ -2.01
Sox2ot-215ENSMUST00000199171 Sprr2hO70559 108 aa2.49□□□□□ -2.01
Sox2ot-215ENSMUST00000199171 Lce3aQ497I5 98 aa2.48□□□□□ -2.01
Sox2ot-215ENSMUST00000199171 Krtap20-2E9Q0A8 60 aa2.47□□□□□ -2.01
Sox2ot-215ENSMUST00000199171 Gm11559Q9D3H7 191 aa2.38□□□□□ -2.03
Sox2ot-215ENSMUST00000199171 Krtap4-16Q91W93 202 aa2.37□□□□□ -2.03
Sox2ot-215ENSMUST00000199171 Gm11554B1AQB2 190 aa2.34□□□□□ -2.04
Sox2ot-215ENSMUST00000199171 ObscnA2AAJ9 8891 aaKnown RBP2.33□□□□□ -2.04
Sox2ot-215ENSMUST00000199171 Gm11568A2A4M2 211 aa2.3□□□□□ -2.04
Sox2ot-215ENSMUST00000199171 Krtap9-1Q64526 186 aa2.3□□□□□ -2.04
Sox2ot-215ENSMUST00000199171 Muc16A0A140LJ72 8478 aa2.29□□□□□ -2.04
Sox2ot-215ENSMUST00000199171 Mt1P02802 61 aaKnown RBP2.26□□□□□ -2.05
Sox2ot-215ENSMUST00000199171 Kmt2dQ6PDK2 5588 aa2.23□□□□□ -2.05
Sox2ot-215ENSMUST00000199171 Gpr98Q8VHN7 6298 aaKnown RBP2.23□□□□□ -2.05
Sox2ot-215ENSMUST00000199171 Gm10024A0A0A0MQA4 119 aa2.22□□□□□ -2.05
Sox2ot-215ENSMUST00000199171 Krtap5-2Q9D5Z7 189 aa2.22□□□□□ -2.05
Sox2ot-215ENSMUST00000199171 Hmcn1D3YXG0 5634 aa2.21□□□□□ -2.06
Sox2ot-215ENSMUST00000199171 Gm39115A0A1B0GSH7 232 aa2.2□□□□□ -2.06
Sox2ot-215ENSMUST00000199171 Muc19Q6PZE0 7524 aa2.2□□□□□ -2.06
Sox2ot-215ENSMUST00000199171 DstQ91ZU6 7393 aaKnown RBP2.19□□□□□ -2.06
Sox2ot-215ENSMUST00000199171 NebE9Q1W3 7152 aa2.16□□□□□ -2.06
Sox2ot-215ENSMUST00000199171 Gm45618A0A1B0GSA0 219 aa2.15□□□□□ -2.06
Sox2ot-215ENSMUST00000199171 Gm2431E9Q8S1 172 aa2.15□□□□□ -2.06
Sox2ot-215ENSMUST00000199171 Gm11567Q9D141 195 aa2.14□□□□□ -2.07
Sox2ot-215ENSMUST00000199171 Gm11639A0A1D5RLM8 5808 aa2.14□□□□□ -2.07
Sox2ot-215ENSMUST00000199171 Gm4553A0A1B0GSA9 284 aa2.07□□□□□ -2.08
Sox2ot-215ENSMUST00000199171 Mt3P28184 68 aa2.07□□□□□ -2.08
Sox2ot-215ENSMUST00000199171 Gm29735A0A1B0GT06 219 aa2.06□□□□□ -2.08
Sox2ot-215ENSMUST00000199171 Gm10153A0A1B0GRL1 320 aa2.04□□□□□ -2.08
Sox2ot-215ENSMUST00000199171 Gm45337A0A1B0GS71 263 aa1.99□□□□□ -2.09
Sox2ot-215ENSMUST00000199171 Gm40460A0A1B0GR10 244 aa1.96□□□□□ -2.1
Sox2ot-215ENSMUST00000199171 Gm7579A0A1B0GRJ4 243 aa1.96□□□□□ -2.1
Sox2ot-215ENSMUST00000199171 Krtap5-5Q2TA51 241 aa1.96□□□□□ -2.1
Sox2ot-215ENSMUST00000199171 Krtap5-4Q62220 223 aa1.96□□□□□ -2.1
Sox2ot-215ENSMUST00000199171 Sprr2bO70554 98 aa1.81□□□□□ -2.12
Sox2ot-215ENSMUST00000199171 AhnakE9Q616 5656 aaKnown RBP1.78□□□□□ -2.12
Sox2ot-215ENSMUST00000199171 1110025L11RikO09048 78 aa1.78□□□□□ -2.13
Sox2ot-215ENSMUST00000199171 Krtap6-5Q925H3 78 aa1.78□□□□□ -2.13
Sox2ot-215ENSMUST00000199171 Gm10229O08631 77 aa1.57□□□□□ -2.16
Sox2ot-215ENSMUST00000199171 Krtap5-1Q64507 230 aa1.53□□□□□ -2.17
Sox2ot-215ENSMUST00000199171 Phgr1Q8K0G7 91 aa1.47□□□□□ -2.17
Sox2ot-215ENSMUST00000199171 Krtap21-1Q925H4 128 aa1.43□□□□□ -2.18
Sox2ot-215ENSMUST00000199171 Gm4559A4IF42 199 aa1.41□□□□□ -2.18
Sox2ot-215ENSMUST00000199171 Krtap6-2O08884 159 aa1.31□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 97.8 ms