RNA–Protein interactions for RNA: ENSMUST00000194959.5

Usp4-209, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Usp4, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-209ENSMUST00000194959 Muc16A0A140LJ72 8478 aa3.24□□□□□ -1.89
Usp4-209ENSMUST00000194959 Lce1fB9EJP6 147 aa3.23□□□□□ -1.89
Usp4-209ENSMUST00000194959 Lce1a1Q9CQH5 143 aa3.23□□□□□ -1.89
Usp4-209ENSMUST00000194959 Gm11562A0PK51 136 aa3.23□□□□□ -1.89
Usp4-209ENSMUST00000194959 Sprr2dO70555 85 aa3.22□□□□□ -1.89
Usp4-209ENSMUST00000194959 Lce3cQ91V05 98 aa3.21□□□□□ -1.9
Usp4-209ENSMUST00000194959 Gm10142J3KMP7 120 aa3.18□□□□□ -1.9
Usp4-209ENSMUST00000194959 Gm11555B1AQ89 175 aa3.18□□□□□ -1.9
Usp4-209ENSMUST00000194959 Krtap4-13Q9D7P3 165 aa3.17□□□□□ -1.9
Usp4-209ENSMUST00000194959 Lce3eF8VQJ0 98 aa3.17□□□□□ -1.9
Usp4-209ENSMUST00000194959 Lce3fQ6PAI4 98 aa3.17□□□□□ -1.9
Usp4-209ENSMUST00000194959 2300003K06RikA2A4M0 262 aa3.14□□□□□ -1.91
Usp4-209ENSMUST00000194959 Macf1Q9QXZ0 7354 aaKnown RBP3.14□□□□□ -1.91
Usp4-209ENSMUST00000194959 ObscnA2AAJ9 8891 aaKnown RBP3.14□□□□□ -1.91
Usp4-209ENSMUST00000194959 Lce3dE9Q8V1 98 aa3.11□□□□□ -1.91
Usp4-209ENSMUST00000194959 Krtap19-4Q925H7 84 aa3.09□□□□□ -1.91
Usp4-209ENSMUST00000194959 Lce1bQ9D149 137 aa3.09□□□□□ -1.91
Usp4-209ENSMUST00000194959 Lce1lQ9D1G7 135 aa3.05□□□□□ -1.92
Usp4-209ENSMUST00000194959 Lce1kJ3QP15 125 aa3.04□□□□□ -1.92
Usp4-209ENSMUST00000194959 Krtap4-7Q9D732 168 aa3.02□□□□□ -1.93
Usp4-209ENSMUST00000194959 Lce3aQ497I5 98 aa3.02□□□□□ -1.93
Usp4-209ENSMUST00000194959 Sprr2iO70560 76 aa2.98□□□□□ -1.93
Usp4-209ENSMUST00000194959 Sprr2hO70559 108 aa2.91□□□□□ -1.94
Usp4-209ENSMUST00000194959 Krtap20-2E9Q0A8 60 aa2.87□□□□□ -1.95
Usp4-209ENSMUST00000194959 Mt1P02802 61 aaKnown RBP2.84□□□□□ -1.95
Usp4-209ENSMUST00000194959 Muc19Q6PZE0 7524 aa2.83□□□□□ -1.96
Usp4-209ENSMUST00000194959 Krtap31-1Q9D644 177 aa2.81□□□□□ -1.96
Usp4-209ENSMUST00000194959 Krtap4-16Q91W93 202 aa2.8□□□□□ -1.96
Usp4-209ENSMUST00000194959 Krtap31-2Q8CAY5 177 aa2.79□□□□□ -1.96
Usp4-209ENSMUST00000194959 Kmt2dQ6PDK2 5588 aa2.77□□□□□ -1.97
Usp4-209ENSMUST00000194959 Gm11568A2A4M2 211 aa2.74□□□□□ -1.97
Usp4-209ENSMUST00000194959 Krtap9-1Q64526 186 aa2.74□□□□□ -1.97
Usp4-209ENSMUST00000194959 Sprr2eO70556 76 aa2.71□□□□□ -1.98
Usp4-209ENSMUST00000194959 Hmcn1D3YXG0 5634 aa2.66□□□□□ -1.98
Usp4-209ENSMUST00000194959 Sprr2fO70557 76 aa2.66□□□□□ -1.98
Usp4-209ENSMUST00000194959 Gm10024A0A0A0MQA4 119 aa2.65□□□□□ -1.98
Usp4-209ENSMUST00000194959 Gm11554B1AQB2 190 aa2.65□□□□□ -1.99
Usp4-209ENSMUST00000194959 Krtap6-3A0A087WQL6 57 aa2.64□□□□□ -1.99
Usp4-209ENSMUST00000194959 DstQ91ZU6 7393 aaKnown RBP2.62□□□□□ -1.99
Usp4-209ENSMUST00000194959 A0A1Y7VJH8 109 aa2.59□□□□□ -1.99
Usp4-209ENSMUST00000194959 Mt3P28184 68 aa2.55□□□□□ -2
Usp4-209ENSMUST00000194959 Krtap5-2Q9D5Z7 189 aa2.53□□□□□ -2
Usp4-209ENSMUST00000194959 NebE9Q1W3 7152 aa2.47□□□□□ -2.01
Usp4-209ENSMUST00000194959 Gm10153A0A1B0GRL1 320 aa2.43□□□□□ -2.02
Usp4-209ENSMUST00000194959 Gm11559Q9D3H7 191 aa2.4□□□□□ -2.02
Usp4-209ENSMUST00000194959 A0A1Y7VLE6 161 aa2.35□□□□□ -2.03
Usp4-209ENSMUST00000194959 Gm11639A0A1D5RLM8 5808 aa2.31□□□□□ -2.04
Usp4-209ENSMUST00000194959 Gm4553A0A1B0GSA9 284 aa2.31□□□□□ -2.04
Usp4-209ENSMUST00000194959 Gm2431E9Q8S1 172 aa2.31□□□□□ -2.04
Usp4-209ENSMUST00000194959 Gm45337A0A1B0GS71 263 aa2.24□□□□□ -2.05
Usp4-209ENSMUST00000194959 Eppk1Q8R0W0 6548 aa2.22□□□□□ -2.05
Usp4-209ENSMUST00000194959 1110025L11RikO09048 78 aa2.17□□□□□ -2.06
Usp4-209ENSMUST00000194959 Krtap6-5Q925H3 78 aa2.17□□□□□ -2.06
Usp4-209ENSMUST00000194959 Gm40460A0A1B0GR10 244 aa2.14□□□□□ -2.07
Usp4-209ENSMUST00000194959 Gm7579A0A1B0GRJ4 243 aa2.14□□□□□ -2.07
Usp4-209ENSMUST00000194959 Krtap5-5Q2TA51 241 aa2.14□□□□□ -2.07
Usp4-209ENSMUST00000194959 Krtap5-4Q62220 223 aa2.14□□□□□ -2.07
Usp4-209ENSMUST00000194959 AhnakE9Q616 5656 aaKnown RBP2.07□□□□□ -2.08
Usp4-209ENSMUST00000194959 Gpr98Q8VHN7 6298 aaKnown RBP2.03□□□□□ -2.08
Usp4-209ENSMUST00000194959 Gm39115A0A1B0GSH7 232 aa1.97□□□□□ -2.09
Usp4-209ENSMUST00000194959 A030005L19RikA0A1Y7VIU2 113 aa1.97□□□□□ -2.09
Usp4-209ENSMUST00000194959 Gm10229O08631 77 aa1.94□□□□□ -2.1
Usp4-209ENSMUST00000194959 Krtap28-10A0A1Y7VP58 119 aa1.86□□□□□ -2.11
Usp4-209ENSMUST00000194959 Gm11567Q9D141 195 aa1.85□□□□□ -2.11
Usp4-209ENSMUST00000194959 Sprr2bO70554 98 aa1.83□□□□□ -2.12
Usp4-209ENSMUST00000194959 Krtap28-13A0A087WQP5 138 aa1.79□□□□□ -2.12
Usp4-209ENSMUST00000194959 A0A1Y7VJ07 166 aa1.79□□□□□ -2.12
Usp4-209ENSMUST00000194959 A030005K14RikA0A1Y7VNY1 122 aa1.77□□□□□ -2.13
Usp4-209ENSMUST00000194959 Phgr1Q8K0G7 91 aa1.76□□□□□ -2.13
Usp4-209ENSMUST00000194959 Krtap21-1Q925H4 128 aa1.75□□□□□ -2.13
Usp4-209ENSMUST00000194959 Gm7544A0A1Y7VJ58 118 aa1.67□□□□□ -2.14
Usp4-209ENSMUST00000194959 Krtap6-2O08884 159 aa1.65□□□□□ -2.15
Usp4-209ENSMUST00000194959 Gm45618A0A1B0GSA0 219 aa1.63□□□□□ -2.15
Usp4-209ENSMUST00000194959 A0A286YCP9 139 aa1.61□□□□□ -2.15
Usp4-209ENSMUST00000194959 Gm29735A0A1B0GT06 219 aa1.6□□□□□ -2.15
Usp4-209ENSMUST00000194959 A030003K21RikA0A1Y7VIM3 128 aa1.53□□□□□ -2.17
Usp4-209ENSMUST00000194959 Gm6217A0A1Y7VJK9 128 aa1.52□□□□□ -2.17
Usp4-209ENSMUST00000194959 A030014E15RikA0A1Y7VJV2 120 aa1.5□□□□□ -2.17
Usp4-209ENSMUST00000194959 Krtap5-1Q64507 230 aa1.1□□□□□ -2.23
Usp4-209ENSMUST00000194959 Gm4559A4IF42 199 aa0.94□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 190.5 ms