RNA–Protein interactions for RNA: ENSMUST00000189738.6

Clasp1-216, Transcript of CLIP-associating protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Clasp1, Length 5,373 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clasp1-216ENSMUST00000189738 Gm11562A0PK51 136 aa3.4□□□□□ -1.87
Clasp1-216ENSMUST00000189738 Krtap31-1Q9D644 177 aa3.38□□□□□ -1.87
Clasp1-216ENSMUST00000189738 Gm11938Q9D3H4 131 aa3.37□□□□□ -1.87
Clasp1-216ENSMUST00000189738 Hmcn2A2AJ76 5100 aa3.35□□□□□ -1.87
Clasp1-216ENSMUST00000189738 Gm11596B1AQB0 205 aa3.35□□□□□ -1.87
Clasp1-216ENSMUST00000189738 Gm11564A2A4L9 201 aa3.34□□□□□ -1.88
Clasp1-216ENSMUST00000189738 Gm11563B1AQ90 168 aa3.34□□□□□ -1.88
Clasp1-216ENSMUST00000189738 Gm11595B1AQA7 289 aa3.34□□□□□ -1.88
Clasp1-216ENSMUST00000189738 Krtap4-8B1AQA8 209 aa3.34□□□□□ -1.88
Clasp1-216ENSMUST00000189738 Muc5bE9Q5I3 4800 aa3.33□□□□□ -1.88
Clasp1-216ENSMUST00000189738 2300003K06RikA2A4M0 262 aa3.33□□□□□ -1.88
Clasp1-216ENSMUST00000189738 Krtap17-1A2A5X6 109 aa3.33□□□□□ -1.88
Clasp1-216ENSMUST00000189738 Krtap4-9B1AQA9 244 aa3.29□□□□□ -1.88
Clasp1-216ENSMUST00000189738 Krtap4-7Q9D732 168 aa3.29□□□□□ -1.88
Clasp1-216ENSMUST00000189738 Lce1kJ3QP15 125 aa3.25□□□□□ -1.89
Clasp1-216ENSMUST00000189738 Mt3P28184 68 aa3.23□□□□□ -1.89
Clasp1-216ENSMUST00000189738 Rnf213E9Q555 5152 aaKnown RBP3.22□□□□□ -1.89
Clasp1-216ENSMUST00000189738 Krtap4-13Q9D7P3 165 aa3.2□□□□□ -1.9
Clasp1-216ENSMUST00000189738 Syne1Q6ZWR6 8799 aa3.16□□□□□ -1.9
Clasp1-216ENSMUST00000189738 Ush2AQ2QI47 5193 aa3.14□□□□□ -1.91
Clasp1-216ENSMUST00000189738 SspoQ8CG65 4998 aa3.08□□□□□ -1.92
Clasp1-216ENSMUST00000189738 Krtap4-16Q91W93 202 aa3.04□□□□□ -1.92
Clasp1-216ENSMUST00000189738 Mt1P02802 61 aaKnown RBP3.03□□□□□ -1.92
Clasp1-216ENSMUST00000189738 Krtap31-2Q8CAY5 177 aa3.02□□□□□ -1.93
Clasp1-216ENSMUST00000189738 Krtap6-3A0A087WQL6 57 aa3.02□□□□□ -1.93
Clasp1-216ENSMUST00000189738 Syne2Q6ZWQ0 6874 aaKnown RBP3□□□□□ -1.93
Clasp1-216ENSMUST00000189738 Lce1a1Q9CQH5 143 aa2.98□□□□□ -1.93
Clasp1-216ENSMUST00000189738 Fsip2A2ARZ3 6995 aa2.95□□□□□ -1.94
Clasp1-216ENSMUST00000189738 Gm11554B1AQB2 190 aa2.85□□□□□ -1.95
Clasp1-216ENSMUST00000189738 Krtap20-2E9Q0A8 60 aa2.82□□□□□ -1.96
Clasp1-216ENSMUST00000189738 Sprr2bO70554 98 aa2.81□□□□□ -1.96
Clasp1-216ENSMUST00000189738 A0A1Y7VLE6 161 aa2.76□□□□□ -1.97
Clasp1-216ENSMUST00000189738 ObscnA2AAJ9 8891 aaKnown RBP2.76□□□□□ -1.97
Clasp1-216ENSMUST00000189738 A030003K21RikA0A1Y7VIM3 128 aa2.62□□□□□ -1.99
Clasp1-216ENSMUST00000189738 Gm11555B1AQ89 175 aa2.6□□□□□ -1.99
Clasp1-216ENSMUST00000189738 Eppk1Q8R0W0 6548 aa2.6□□□□□ -1.99
Clasp1-216ENSMUST00000189738 Muc16A0A140LJ72 8478 aa2.5□□□□□ -2.01
Clasp1-216ENSMUST00000189738 Kmt2dQ6PDK2 5588 aa2.49□□□□□ -2.01
Clasp1-216ENSMUST00000189738 1110025L11RikO09048 78 aa2.47□□□□□ -2.01
Clasp1-216ENSMUST00000189738 Krtap6-5Q925H3 78 aa2.47□□□□□ -2.01
Clasp1-216ENSMUST00000189738 Gm6217A0A1Y7VJK9 128 aa2.46□□□□□ -2.02
Clasp1-216ENSMUST00000189738 DstQ91ZU6 7393 aaKnown RBP2.4□□□□□ -2.03
Clasp1-216ENSMUST00000189738 Gm10229O08631 77 aa2.33□□□□□ -2.04
Clasp1-216ENSMUST00000189738 Gm11568A2A4M2 211 aa2.3□□□□□ -2.04
Clasp1-216ENSMUST00000189738 Krtap9-1Q64526 186 aa2.3□□□□□ -2.04
Clasp1-216ENSMUST00000189738 Gm11559Q9D3H7 191 aa2.3□□□□□ -2.04
Clasp1-216ENSMUST00000189738 Macf1Q9QXZ0 7354 aaKnown RBP2.29□□□□□ -2.04
Clasp1-216ENSMUST00000189738 NebE9Q1W3 7152 aa2.25□□□□□ -2.05
Clasp1-216ENSMUST00000189738 Krtap28-10A0A1Y7VP58 119 aa2.15□□□□□ -2.07
Clasp1-216ENSMUST00000189738 Phgr1Q8K0G7 91 aa2.15□□□□□ -2.07
Clasp1-216ENSMUST00000189738 Gm11639A0A1D5RLM8 5808 aa2.13□□□□□ -2.07
Clasp1-216ENSMUST00000189738 A030005K14RikA0A1Y7VNY1 122 aa2.11□□□□□ -2.07
Clasp1-216ENSMUST00000189738 A0A1Y7VJH8 109 aa2.1□□□□□ -2.07
Clasp1-216ENSMUST00000189738 A0A1Y7VJ07 166 aa2.09□□□□□ -2.07
Clasp1-216ENSMUST00000189738 Krtap5-2Q9D5Z7 189 aa2.09□□□□□ -2.07
Clasp1-216ENSMUST00000189738 Muc19Q6PZE0 7524 aa2.03□□□□□ -2.09
Clasp1-216ENSMUST00000189738 Gm4553A0A1B0GSA9 284 aa1.96□□□□□ -2.1
Clasp1-216ENSMUST00000189738 Krtap28-13A0A087WQP5 138 aa1.95□□□□□ -2.1
Clasp1-216ENSMUST00000189738 Gm7544A0A1Y7VJ58 118 aa1.95□□□□□ -2.1
Clasp1-216ENSMUST00000189738 Gpr98Q8VHN7 6298 aaKnown RBP1.95□□□□□ -2.1
Clasp1-216ENSMUST00000189738 A030005L19RikA0A1Y7VIU2 113 aa1.92□□□□□ -2.1
Clasp1-216ENSMUST00000189738 Hmcn1D3YXG0 5634 aa1.91□□□□□ -2.1
Clasp1-216ENSMUST00000189738 Krtap6-2O08884 159 aa1.86□□□□□ -2.11
Clasp1-216ENSMUST00000189738 Gm2431E9Q8S1 172 aa1.82□□□□□ -2.12
Clasp1-216ENSMUST00000189738 A030014E15RikA0A1Y7VJV2 120 aa1.81□□□□□ -2.12
Clasp1-216ENSMUST00000189738 Gm10153A0A1B0GRL1 320 aa1.8□□□□□ -2.12
Clasp1-216ENSMUST00000189738 Krtap21-1Q925H4 128 aa1.76□□□□□ -2.13
Clasp1-216ENSMUST00000189738 AhnakE9Q616 5656 aaKnown RBP1.76□□□□□ -2.13
Clasp1-216ENSMUST00000189738 Gm45337A0A1B0GS71 263 aa1.72□□□□□ -2.13
Clasp1-216ENSMUST00000189738 Gm40460A0A1B0GR10 244 aa1.71□□□□□ -2.14
Clasp1-216ENSMUST00000189738 Gm7579A0A1B0GRJ4 243 aa1.71□□□□□ -2.14
Clasp1-216ENSMUST00000189738 Krtap5-5Q2TA51 241 aa1.71□□□□□ -2.14
Clasp1-216ENSMUST00000189738 Krtap5-4Q62220 223 aa1.71□□□□□ -2.14
Clasp1-216ENSMUST00000189738 A0A286YCP9 139 aa1.58□□□□□ -2.16
Clasp1-216ENSMUST00000189738 Gm39115A0A1B0GSH7 232 aa1.56□□□□□ -2.16
Clasp1-216ENSMUST00000189738 Gm11567Q9D141 195 aa1.5□□□□□ -2.17
Clasp1-216ENSMUST00000189738 Gm45618A0A1B0GSA0 219 aa1.3□□□□□ -2.2
Clasp1-216ENSMUST00000189738 Gm29735A0A1B0GT06 219 aa1.3□□□□□ -2.2
Clasp1-216ENSMUST00000189738 Krtap5-1Q64507 230 aa0.97□□□□□ -2.25
Clasp1-216ENSMUST00000189738 Gm4559A4IF42 199 aa0.74□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 144 ms